SitesBLAST
Comparing WP_058929012.1 NCBI__GCF_001484605.1:WP_058929012.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q96329 Acyl-coenzyme A oxidase 4, peroxisomal; AOX 4; G6p; Short-chain acyl-CoA oxidase; AtCX4; AtG6; SAOX; EC 1.3.3.6 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
42% identity, 97% coverage: 12:400/400 of query aligns to 46:429/436 of Q96329
2ix6A Short chain specific acyl-coa oxidase from arabidopsis thaliana, acx4 (see paper)
42% identity, 97% coverage: 12:400/400 of query aligns to 30:413/416 of 2ix6A
- active site: L158 (= L140), T159 (= T141), S271 (≠ T258), E392 (= E379), R404 (= R391)
- binding flavin-adenine dinucleotide: T159 (= T141), G164 (= G146), S165 (= S147), W189 (= W171), N239 (≠ Q226), R297 (= R284), F300 (= F287), L304 (≠ I291), F307 (≠ Y294), N310 (≠ V297), E365 (= E352), L366 (= L353), G369 (= G356), I372 (≠ L359), Y391 (= Y378), T394 (= T381), D396 (≠ S383)
2ix5A Short chain specific acyl-coa oxidase from arabidopsis thaliana, acx4 in complex with acetoacetyl-coa (see paper)
42% identity, 97% coverage: 12:400/400 of query aligns to 30:413/415 of 2ix5A
- active site: L158 (= L140), T159 (= T141), S271 (≠ T258), E392 (= E379), R404 (= R391)
- binding acetoacetyl-coenzyme a: S165 (= S147), A167 (≠ S149), S168 (≠ V150), F261 (= F248), L268 (= L255), R272 (= R259), E392 (= E379), G393 (= G380), R404 (= R391)
- binding flavin-adenine dinucleotide: L158 (= L140), T159 (= T141), G164 (= G146), S165 (= S147), W189 (= W171), N239 (≠ Q226), R297 (= R284), F300 (= F287), L304 (≠ I291), F307 (≠ Y294), L309 (= L296), N310 (≠ V297), E365 (= E352), L366 (= L353), G368 (= G355), G369 (= G356), Y391 (= Y378), T394 (= T381), D396 (≠ S383), I397 (≠ M384)
2ebaA Crystal structure of the putative glutaryl-coa dehydrogenase from thermus thermophilus
41% identity, 97% coverage: 13:399/400 of query aligns to 3:380/380 of 2ebaA
- active site: L131 (= L140), T132 (= T141), A239 (≠ T258), E360 (= E379), R372 (= R391)
- binding flavin-adenine dinucleotide: L131 (= L140), T132 (= T141), G136 (≠ H145), G137 (= G146), S138 (= S147), W161 (= W171), T163 (≠ G173), R265 (= R284), L272 (≠ I291), K275 (≠ Y294), D333 (≠ E352), I334 (≠ L353), G337 (= G356), T355 (≠ V374), T358 (= T377), Y359 (= Y378), T362 (= T381)
3sf6A Crystal structure of glutaryl-coa dehydrogenase from mycobacterium smegmatis (see paper)
38% identity, 98% coverage: 8:399/400 of query aligns to 1:386/387 of 3sf6A
- active site: L134 (= L140), T135 (= T141), A245 (≠ T258), E366 (= E379), Q378 (≠ R391)
- binding dihydroflavine-adenine dinucleotide: F132 (= F138), L134 (= L140), T135 (= T141), G140 (= G146), S141 (= S147), W165 (= W171), I166 (= I172), T167 (≠ G173), S361 (≠ V374), T364 (= T377), Y365 (= Y378), T368 (= T381), E370 (≠ S383), M371 (= M384)
2r0nA The effect of a glu370asp mutation in glutaryl-coa dehydrogenase on proton transfer to the dienolate intermediate (see paper)
38% identity, 97% coverage: 13:399/400 of query aligns to 6:388/390 of 2r0nA
- active site: L133 (= L140), T134 (= T141), A247 (≠ T258), E368 (= E379), R380 (= R391)
- binding flavin-adenine dinucleotide: F131 (= F138), L133 (= L140), T134 (= T141), G139 (= G146), S140 (= S147), W166 (= W171), I167 (= I172), T168 (≠ G173), Y367 (= Y378), T370 (= T381), D372 (≠ S383)
- binding 3-thiaglutaryl-CoA: R92 (≠ N99), S93 (≠ T100), V97 (≠ I104), P142 (≠ S149), G238 (≠ R249), F241 (≠ S252), L244 (= L255), N245 (≠ Q256), P318 (≠ V329), Y367 (= Y378), E368 (= E379), I377 (= I388)
1sirA The crystal structure and mechanism of human glutaryl-coa dehydrogenase (see paper)
38% identity, 97% coverage: 13:399/400 of query aligns to 6:388/390 of 1sirA
- active site: L133 (= L140), T134 (= T141), A247 (≠ T258), E368 (= E379), R380 (= R391)
- binding flavin-adenine dinucleotide: F131 (= F138), L133 (= L140), T134 (= T141), G139 (= G146), S140 (= S147), W166 (= W171), I167 (= I172), T168 (≠ G173), Y367 (= Y378), T370 (= T381)
- binding s-4-nitrobutyryl-coa: S93 (≠ T100), S140 (= S147), F241 (≠ S252), G242 (≠ R253), L244 (= L255), N245 (≠ Q256), R248 (= R259), P318 (≠ V329), Y367 (= Y378), E368 (= E379), R380 (= R391)
2r0mA The effect of a glu370asp mutation in glutaryl-coa dehydrogenase on proton transfer to the dienolate intermediate (see paper)
38% identity, 97% coverage: 13:399/400 of query aligns to 6:388/390 of 2r0mA
- active site: L133 (= L140), T134 (= T141), A247 (≠ T258), D368 (≠ E379), R380 (= R391)
- binding 4-nitrobutanoic acid: L101 (= L108), Y367 (= Y378), D368 (≠ E379)
- binding flavin-adenine dinucleotide: F131 (= F138), L133 (= L140), T134 (= T141), G139 (= G146), S140 (= S147), W166 (= W171), I167 (= I172), T168 (≠ G173), L210 (≠ K221), Y367 (= Y378), T370 (= T381)
3swoA Crystal structure of a glutaryl-coa dehydrogenase from mycobacterium smegmatis in complex with fadh2 (see paper)
36% identity, 97% coverage: 13:399/400 of query aligns to 8:387/388 of 3swoA
- active site: L135 (= L140), T136 (= T141), A246 (≠ T258), E367 (= E379), K379 (≠ R391)
- binding dihydroflavine-adenine dinucleotide: F133 (= F138), L135 (= L140), T136 (= T141), G141 (= G146), S142 (= S147), W166 (= W171), I167 (= I172), T168 (≠ G173), R272 (= R284), V274 (≠ Q286), F275 (= F287), L279 (≠ I291), Y282 (= Y294), T340 (≠ E352), L341 (= L353), G344 (= G356), I347 (≠ L359), T365 (= T377), Y366 (= Y378), T369 (= T381), E371 (≠ S383), M372 (= M384)
3gqtC Crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei with fragment (1,4-dimethyl-1,2,3,4- tetrahydroquinoxalin-6-yl)methylamine (see paper)
37% identity, 97% coverage: 13:399/400 of query aligns to 7:385/385 of 3gqtC
- active site: L135 (= L140), T136 (= T141), A250 (≠ T258), E365 (= E379), R377 (= R391)
- binding 1-(1,4-dimethyl-1,2,3,4-tetrahydroquinoxalin-6-yl)methanamine: W166 (= W171), K210 (= K218), L213 (≠ K221), T218 (≠ Q226), Y364 (= Y378)
3eonC 2.55a crystal structure of native glutaryl-coa dehydrogenase from burkholderia pseudomallei in complex with a small molecule (see paper)
37% identity, 97% coverage: 13:398/400 of query aligns to 7:382/382 of 3eonC
3gncA Crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei with fragment 6421 (see paper)
37% identity, 97% coverage: 13:398/400 of query aligns to 8:380/380 of 3gncA