Comparing WP_058930133.1 NCBI__GCF_001484605.1:WP_058930133.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3cuxA Atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design (see paper)
54% identity, 92% coverage: 24:531/550 of query aligns to 11:498/501 of 3cuxA
P30952 Malate synthase 1; EC 2.3.3.9 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
50% identity, 95% coverage: 25:548/550 of query aligns to 30:552/554 of P30952
Sites not aligning to the query:
3cv2A Atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design (see paper)
48% identity, 93% coverage: 22:531/550 of query aligns to 11:520/524 of 3cv2A
3cv1A Atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design (see paper)
47% identity, 93% coverage: 22:531/550 of query aligns to 16:525/529 of 3cv1A
3cuzA Atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design (see paper)
47% identity, 93% coverage: 22:531/550 of query aligns to 16:525/529 of 3cuzA
5cahA Crystal structure of mycobacterium tuberculosis malate synthase in complex with 6h-thieno[2,3-b]pyrrole-5-carboxylic acid (see paper)
24% identity, 69% coverage: 98:476/550 of query aligns to 244:633/706 of 5cahA
6c8pA Crystal structure of mycobacterium tuberculosis malate synthase in complex with 2-f-phenyldiketoacid (see paper)
25% identity, 63% coverage: 129:476/550 of query aligns to 290:643/716 of 6c8pA
Sites not aligning to the query:
3sadA Crystal structure of mycobacterium tuberculosis malate synthase in complex with 4-(2-mehtylphenyl)-2,4-dioxobutanoic acid inhibitor (see paper)
24% identity, 75% coverage: 98:509/550 of query aligns to 245:671/709 of 3sadA
6c7bA Crystal structure of mycobacterium tuberculosis malate synthase in complex with methoxynaphthyldiketoacid (see paper)
24% identity, 75% coverage: 98:509/550 of query aligns to 248:672/710 of 6c7bA
3sazA Crystal structure of mycobacterium tuberculosis malate synthase in complex with 4-(3-bromophenyl)-2,4-dioxobutanoic acid inhibitor (see paper)
24% identity, 75% coverage: 98:509/550 of query aligns to 248:674/712 of 3sazA
3s9iA Crystal structure of mycobacterium tuberculosis malate synthase in complex with 2-4-dioxo-4-phenylbutanoic acid inhibitor (see paper)
24% identity, 69% coverage: 98:476/550 of query aligns to 248:642/714 of 3s9iA
6asuA Crystal structure of mycobacterium tuberculosis malate synthase in complex with 4-methyl-phenyldiketoacid (see paper)
25% identity, 69% coverage: 129:509/550 of query aligns to 287:675/712 of 6asuA
Sites not aligning to the query:
5cewA Crystal structure of mycobacterium tuberculosis malate synthase in complex with 2-(pyridin-4-yl)thiazolidine-4-carboxylic acid (see paper)
24% identity, 75% coverage: 98:509/550 of query aligns to 248:674/712 of 5cewA
5cjnA Crystal structure of mycobacterium tuberculosis malate synthase in complex with 3-(3-oxo-3,4-dihydroquinoxalin-2-yl)acrylate (see paper)
25% identity, 63% coverage: 129:476/550 of query aligns to 285:639/712 of 5cjnA
Sites not aligning to the query:
5cbbA Crystal structure of mycobacterium tuberculosis malate synthase in complex with 5-(3h-indol-3-ylidene)-2,5-dihydro-1h-pyrazole-3- carboxylate (see paper)
24% identity, 69% coverage: 98:476/550 of query aligns to 244:640/713 of 5cbbA
Sites not aligning to the query:
5cc5A Crystal structure of mycobacterium tuberculosis malate synthase in complex with 1h-indole-3-carboxylic acid
25% identity, 69% coverage: 129:509/550 of query aligns to 287:671/709 of 5cc5A
Sites not aligning to the query:
5cakA Crystal structure of mycobacterium tuberculosis malate synthase in complex with 2-hydroxy-3-(1h-indol-3-yl)propanoic acid (see paper)
25% identity, 63% coverage: 129:476/550 of query aligns to 290:644/717 of 5cakA
Sites not aligning to the query:
3sb0A Crystal structure of mycobacterium tuberculosis malate synthase in complex with 4-(2-chloro-6-fluoro-3-methylphenyl)-2,4-dioxobutanoic acid inhibitor (see paper)
24% identity, 69% coverage: 98:476/550 of query aligns to 244:635/708 of 3sb0A
Sites not aligning to the query:
5cc7A Crystal structure of mycobacterium tuberculosis malate synthase in complex with 1h-indole-6-carboxylic acid
24% identity, 69% coverage: 98:476/550 of query aligns to 245:635/704 of 5cc7A
Sites not aligning to the query:
5cc6A Crystal structure of mycobacterium tuberculosis malate synthase in complex with 1h-indole-5-carboxylic acid
24% identity, 69% coverage: 98:476/550 of query aligns to 242:632/701 of 5cc6A
Sites not aligning to the query:
>WP_058930133.1 NCBI__GCF_001484605.1:WP_058930133.1
MNTFTDSFTINGITLTAQPICRQNEVLTPDALEFVAKLHRATAERRQELLQARRTRRADI
AGGQDPRFLRETEDIRNDPSWRVAPPAPGLEDRRVEITGPVDKKMTINALNSGAKVWLAD
MEDSSTPTWRNVIKGQLNLTDALERRIDFTSPEGKEYKLRPAGELPTIVVRPRGWHLPEK
HMIIDGAPVAGGIVDFGLFFFHNARRLLAQGKGPYFYLPKIENHLEARLWNDIFILAQDL
LGIPQGTIRATVLIETITAAFEMEEILYELRDHASGLNAGRWDYIFSLIKNFRTRGPRFV
LPDRAQVTMTQPFMRAYTEQLVRACHKRGAMAIGGMAAAVPNRKDEAANTNAFEKVRADK
TREASDGFDGSWVAHPDLVPVCREVFDATLGERPNQLDRTREDVIPDDRALINVAATAGT
ITEQGIRNNIEVGIRYIESWLRGNGAVAIHNLMEDAATAEISRSQIWQWMFASAITDRGE
IITHQWIEELLDEEFARLERFDGDRFEDSRDIFEEVTLSQDFPSFLTLPAYARYLTEARE
KATKEELAAA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory