SitesBLAST
Comparing WP_058933004.1 NCBI__GCF_001484605.1:WP_058933004.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4f3xA Crystal structure of putative aldehyde dehydrogenase from sinorhizobium meliloti 1021 complexed with NAD
47% identity, 96% coverage: 17:471/476 of query aligns to 14:472/476 of 4f3xA
- active site: N150 (= N152), K173 (= K175), E247 (= E248), C281 (= C282), E379 (= E378), D456 (= D455)
- binding nicotinamide-adenine-dinucleotide: I146 (≠ V148), A147 (= A149), P148 (= P150), W149 (= W151), K173 (= K175), E176 (≠ D178), G205 (= G207), G209 (= G210), I213 (≠ V214), I223 (= I224), G225 (= G226), D226 (≠ S227), T229 (≠ A230), G249 (= G250), C281 (= C282), Q328 (≠ H329), R331 (≠ A332), E379 (= E378), F381 (= F380)
P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12) (see paper)
48% identity, 97% coverage: 8:471/476 of query aligns to 6:471/474 of P77674
1wndA Escherichia coli ydcw gene product is a medium-chain aldehyde dehydrogenase as determined by kinetics and crystal structure (see paper)
48% identity, 97% coverage: 8:471/476 of query aligns to 6:471/474 of 1wndA
- active site: N149 (= N152), K172 (= K175), E246 (= E248), C280 (= C282), E378 (= E378), D455 (= D455)
- binding calcium ion: G249 (= G251), K250 (= K252), A251 (= A253), G405 (≠ A405), L406 (= L406), A407 (= A407), Y427 (≠ F427)
1wnbB Escherichia coli ydcw gene product is a medium-chain aldehyde dehydrogenase (complexed with nadh and betaine aldehyde) (see paper)
48% identity, 97% coverage: 8:471/476 of query aligns to 6:471/474 of 1wnbB
- active site: N149 (= N152), K172 (= K175), E246 (= E248), C280 (= C282), E378 (= E378), D455 (= D455)
- binding betaine aldehyde: D279 (= D281), F436 (≠ I436), L438 (= L438)
- binding 1,4-dihydronicotinamide adenine dinucleotide: I145 (≠ V148), A146 (= A149), W148 (= W151), K172 (= K175), G204 (= G207), G208 (= G210), D209 (≠ A211), T223 (= T225), G224 (= G226), S225 (= S227), T228 (≠ A230), H231 (≠ A233), G248 (= G250), E378 (= E378)
1wnbA Escherichia coli ydcw gene product is a medium-chain aldehyde dehydrogenase (complexed with nadh and betaine aldehyde) (see paper)
48% identity, 97% coverage: 8:471/476 of query aligns to 6:471/474 of 1wnbA
- active site: N149 (= N152), K172 (= K175), E246 (= E248), C280 (= C282), E378 (= E378), D455 (= D455)
- binding 1,4-dihydronicotinamide adenine dinucleotide: I145 (≠ V148), A146 (= A149), W148 (= W151), K172 (= K175), G204 (= G207), G208 (= G210), D209 (≠ A211), G224 (= G226), S225 (= S227), T228 (≠ A230), H231 (≠ A233), G248 (= G250), F380 (= F380)
4o6rA Crystal structure of a putative aldehyde dehydrogenase from burkholderia cenocepacia
38% identity, 99% coverage: 6:475/476 of query aligns to 5:480/489 of 4o6rA
- active site: N150 (= N152), K173 (= K175), E248 (= E248), C282 (= C282), E383 (= E378), E460 (≠ D455)
- binding adenosine monophosphate: I146 (≠ V148), V147 (≠ A149), K173 (= K175), G206 (= G207), G210 (= G210), Q211 (≠ A211), F224 (≠ I224), G226 (= G226), S227 (= S227), T230 (≠ A230), R233 (≠ A233)
4go4A Crystal structure of pnpe in complex with nicotinamide adenine dinucleotide
38% identity, 99% coverage: 6:476/476 of query aligns to 4:479/487 of 4go4A
- active site: N149 (= N152), K172 (= K175), E247 (= E248), C281 (= C282), E381 (= E378), E458 (≠ D455)
- binding nicotinamide-adenine-dinucleotide: I145 (≠ V148), V146 (≠ A149), W148 (= W151), N149 (= N152), F154 (≠ M157), K172 (= K175), G205 (= G207), G209 (= G210), Q210 (≠ A211), F223 (≠ I224), T224 (= T225), G225 (= G226), S226 (= S227), T229 (≠ A230), E247 (= E248), G249 (= G250), C281 (= C282), E381 (= E378), F383 (= F380)
5gtlA NADPH complex structure of aldehyde dehydrogenase from bacillus cereus
36% identity, 98% coverage: 3:470/476 of query aligns to 15:486/491 of 5gtlA
- active site: N165 (= N152), K188 (= K175), E263 (= E248), C297 (= C282), E394 (= E378), E471 (≠ D455)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: I161 (≠ V148), P163 (= P150), K188 (= K175), A190 (≠ S177), E191 (≠ D178), Q192 (≠ T179), G221 (= G207), G225 (= G210), G241 (= G226), S242 (= S227), T245 (≠ A230), L264 (= L249), C297 (= C282), E394 (= E378), F396 (= F380)
5gtkA NAD+ complex structure of aldehyde dehydrogenase from bacillus cereus
36% identity, 98% coverage: 3:470/476 of query aligns to 15:486/491 of 5gtkA
- active site: N165 (= N152), K188 (= K175), E263 (= E248), C297 (= C282), E394 (= E378), E471 (≠ D455)
- binding nicotinamide-adenine-dinucleotide: I161 (≠ V148), I162 (≠ A149), P163 (= P150), W164 (= W151), K188 (= K175), E191 (≠ D178), G221 (= G207), G225 (= G210), A226 (= A211), F239 (≠ I224), G241 (= G226), S242 (= S227), T245 (≠ A230), Y248 (≠ A233), L264 (= L249), C297 (= C282), Q344 (≠ H329), R347 (≠ A332), E394 (= E378), F396 (= F380)
4neaA 1.90 angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betb) from staphylococcus aureus in complex with NAD+ and bme-free cys289 (see paper)
36% identity, 98% coverage: 6:472/476 of query aligns to 19:493/505 of 4neaA
- active site: N166 (= N152), K189 (= K175), E264 (= E248), C298 (= C282), E399 (= E378), E476 (≠ D455)
- binding nicotinamide-adenine-dinucleotide: P164 (= P150), K189 (= K175), E192 (≠ D178), G222 (= G207), G226 (= G210), G242 (= G226), G243 (≠ S227), T246 (≠ A230), H249 (≠ A233), I250 (≠ V234), C298 (= C282), E399 (= E378), F401 (= F380)
Q9HTJ1 NAD/NADP-dependent betaine aldehyde dehydrogenase; BADH; EC 1.2.1.8 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
37% identity, 98% coverage: 8:474/476 of query aligns to 10:483/490 of Q9HTJ1
- GAWN 150:153 (≠ APWN 149:152) binding NADPH
- K162 (= K161) active site, Charge relay system
- KPSE 176:179 (≠ KPSD 175:178) binding NADPH
- G209 (= G207) binding NADPH
- GTST 230:233 (≠ SVRA 227:230) binding NADPH
- E252 (= E248) active site, Proton acceptor
- C286 (= C282) binding covalent; modified: Cysteine sulfenic acid (-SOH)
- E387 (= E378) binding NADPH
- E464 (≠ D455) active site, Charge relay system
4cazA Crystal structure of betaine aldehyde dehydrogenase from pseudomonas aeruginosa in complex with nadh
37% identity, 98% coverage: 8:474/476 of query aligns to 9:482/489 of 4cazA
- active site: N152 (= N152), K175 (= K175), E251 (= E248), C285 (= C282), E386 (= E378), E463 (≠ D455)
- binding [[(2R,3S,4R,5R)-5-[(3R)-3-aminocarbonyl-3,4-dihydro-2H-pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanidyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphate: I148 (≠ V148), G149 (≠ A149), W151 (= W151), N152 (= N152), K175 (= K175), E178 (≠ D178), G208 (= G207), G212 (= G210), F226 (≠ I224), T227 (= T225), G228 (= G226), G229 (≠ S227), T232 (≠ A230), V236 (= V234), E251 (= E248), L252 (= L249), C285 (= C282), E386 (= E378), F388 (= F380)
2woxA Betaine aldehyde dehydrogenase from pseudomonas aeruginosa with NAD(p) h-catalytic thiol adduct. (see paper)
37% identity, 98% coverage: 8:474/476 of query aligns to 9:482/489 of 2woxA
- active site: N152 (= N152), K175 (= K175), E251 (= E248), C285 (= C282), E386 (= E378), E463 (≠ D455)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: I148 (≠ V148), G149 (≠ A149), W151 (= W151), N152 (= N152), K175 (= K175), S177 (= S177), E178 (≠ D178), G208 (= G207), G212 (= G210), F226 (≠ I224), T227 (= T225), G228 (= G226), G229 (≠ S227), T232 (≠ A230), V236 (= V234), E251 (= E248), L252 (= L249), C285 (= C282), E386 (= E378), F388 (= F380)
2wmeA Crystallographic structure of betaine aldehyde dehydrogenase from pseudomonas aeruginosa (see paper)
37% identity, 98% coverage: 8:474/476 of query aligns to 9:482/489 of 2wmeA
- active site: N152 (= N152), K175 (= K175), E251 (= E248), C285 (= C282), E386 (= E378), E463 (≠ D455)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G149 (≠ A149), W151 (= W151), K175 (= K175), S177 (= S177), E178 (≠ D178), G208 (= G207), G212 (= G210), F226 (≠ I224), G228 (= G226), G229 (≠ S227), T232 (≠ A230), V236 (= V234)
7radA Crystal structure analysis of aldh1b1
37% identity, 98% coverage: 6:470/476 of query aligns to 14:484/493 of 7radA
- binding nicotinamide-adenine-dinucleotide: I158 (≠ V148), I159 (≠ A149), P160 (= P150), W161 (= W151), N162 (= N152), M167 (= M157), K185 (= K175), E188 (≠ D178), G218 (= G207), G222 (= G210), A223 (= A211), T237 (= T225), G238 (= G226), S239 (= S227), V242 (≠ A230), E261 (= E248), L262 (= L249), C295 (= C282), E392 (= E378), F394 (= F380)
- binding 3-(2-methoxyphenyl)-1-(4-phenylphenyl)-6,7,8,9-tetrahydro-5~{H}-imidazo[1,2-a][1,3]diazepine: L113 (≠ E102), E117 (≠ A106), F163 (≠ Y153), E285 (= E272), F289 (= F276), N450 (≠ I436), V452 (≠ L438)
7mjdA Crystal structure analysis of aldh1b1
37% identity, 98% coverage: 6:470/476 of query aligns to 14:484/493 of 7mjdA
- binding nicotinamide-adenine-dinucleotide: I158 (≠ V148), I159 (≠ A149), P160 (= P150), W161 (= W151), N162 (= N152), M167 (= M157), K185 (= K175), E188 (≠ D178), G218 (= G207), G222 (= G210), F236 (≠ I224), T237 (= T225), G238 (= G226), S239 (= S227), V242 (≠ A230), E261 (= E248), L262 (= L249), C295 (= C282), E392 (= E378), F394 (= F380)
- binding 8-(2-methoxyphenyl)-10-(4-phenylphenyl)-1$l^{4},8-diazabicyclo[5.3.0]deca-1(7),9-diene: E117 (≠ A106), E285 (= E272), F289 (= F276), N450 (≠ I436), V452 (≠ L438)
7mjcA Crystal structure analysis of aldh1b1
37% identity, 98% coverage: 6:470/476 of query aligns to 14:484/493 of 7mjcA
- binding nicotinamide-adenine-dinucleotide: I158 (≠ V148), I159 (≠ A149), P160 (= P150), W161 (= W151), N162 (= N152), K185 (= K175), E188 (≠ D178), G218 (= G207), G222 (= G210), T237 (= T225), G238 (= G226), S239 (= S227), V242 (≠ A230), E261 (= E248), L262 (= L249), C295 (= C282), E392 (= E378), F394 (= F380)
O14293 Putative aldehyde dehydrogenase-like protein C9E9.09c; EC 1.2.1.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
36% identity, 100% coverage: 2:476/476 of query aligns to 20:501/503 of O14293
- S248 (= S227) modified: Phosphoserine
- S501 (≠ A476) modified: Phosphoserine
P17202 Aminoaldehyde dehydrogenase BADH; 4-trimethylammoniobutyraldehyde dehydrogenase BADH; Aminobutyraldehyde dehydrogenase BADH; Betaine aldehyde dehydrogenase; SoBADH; EC 1.2.1.-; EC 1.2.1.47; EC 1.2.1.19; EC 1.2.1.8 from Spinacia oleracea (Spinach) (see 3 papers)
35% identity, 98% coverage: 6:470/476 of query aligns to 9:482/497 of P17202
- I28 (≠ V25) binding K(+)
- D96 (≠ N91) binding K(+)
- SPW 156:158 (≠ APW 149:151) binding NAD(+)
- Y160 (= Y153) mutation to A: Decreases binding affinity for betaine aldehyde; increases binding affinity for 4-(trimethylamino)butanal.
- W167 (= W160) mutation to A: Decreases binding affinity for betaine aldehyde; increases binding affinity for 4-aminobutanal.
- KPSE 182:185 (≠ KPSD 175:178) binding NAD(+)
- L186 (≠ T179) binding K(+)
- SSAT 236:239 (≠ SVRA 227:230) binding NAD(+)
- V251 (≠ L242) binding in other chain
- L258 (= L249) binding NAD(+)
- W285 (≠ F276) mutation to A: Decreases binding affinity for betaine aldehyde.
- E390 (= E378) binding NAD(+)
- A441 (= A429) mutation to I: Decreases binding affinity for betaine aldehyde; increases binding affinity for 4-aminobutanal.
- C450 (≠ L438) mutation to S: Loss of partial inactivation by betaine aldehyde in the absence of NAD(+).
- W456 (≠ H444) binding NAD(+); mutation to A: Decreases binding affinity for betaine aldehyde.
- K460 (= K448) binding K(+)
Q56YU0 Aldehyde dehydrogenase family 2 member C4; ALDH1a; Protein REDUCED EPIDERMAL FLUORESCENCE 1; EC 1.2.1.3 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
36% identity, 98% coverage: 8:474/476 of query aligns to 23:495/501 of Q56YU0
- G152 (≠ S135) mutation to E: In ref1-7; reduced activity on sinapaldehyde.
- G416 (≠ A395) mutation to R: In ref1-6; reduced activity on sinapaldehyde.
Query Sequence
>WP_058933004.1 NCBI__GCF_001484605.1:WP_058933004.1
MVQTLQNFINGEFVTPAGTDLLDIVNPTNGEVVAQSPVSIQADVDAAMTAAKDAFKTWKH
VTPGQRQLMLLKLADAVEANSDELVEAQHRNTGQVRSLIASEEIAAGADQLRFFAGAARI
LEGKSAGEYFEGHTSYVRREPIGVVAQVAPWNYPFLMAIWKIGPALAAGNTVVLKPSDTT
PESTLVLARLAGDILPAGVLNVVLGTGATGAMMVEHRVPGLVSITGSVRAGIAVASGAAK
GLKRAHLELGGKAPAIVFKDADIKKSAAAIAEFAFFNAGQDCTAITRVLVEDSVHDDVVA
AMVEHTKTLHTGSQNDEDNYFGPLNNVNHFNAVTSVVEHLPENCKVVTGGHRAGDKGFFF
EPTIVTGAKQTDDIVQQETFGPVITVQKFSSEAEALELANDVEYALASSVWTSDHGTAMR
MSRDLDFGAVWINTHILLTAEMPHGGFKQSGYGKDLSMYGVEDYTRIKHVMSALDA
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory