SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing WP_059149765.1 NCBI__GCF_001046635.1:WP_059149765.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

8cekA Succinyl-coa reductase from clostridium kluyveri (sucd) with NADPH (see paper)
39% identity, 95% coverage: 16:466/474 of query aligns to 3:449/449 of 8cekA

query
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8cekA

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binding nadp nicotinamide-adenine-dinucleotide phosphate: P106 (= P121), I107 (≠ S122), H133 (= H148), P134 (= P149), T185 (= T200), G186 (= G201), G187 (= G202), R190 (≠ M205), V204 (= V219), C238 (= C253), E328 (= E343), L407 (= L423)

8cejC Succinyl-coa reductase from clostridium kluyveri (sucd) with mesaconyl-c1-coa (see paper)
39% identity, 95% coverage: 16:466/474 of query aligns to 3:449/449 of 8cejC

query
sites
8cejC

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binding Mesaconyl Coenzme A: K66 (= K81), P106 (= P121), T108 (= T123), N109 (= N124), A131 (≠ C146), P132 (= P147), H133 (= H148), P134 (= P149), R169 (≠ V184), G189 (≠ P204), R190 (≠ M205), I237 (≠ S252), C238 (= C253), S239 (= S254), T391 (≠ S406), G394 (≠ S410), T405 (≠ F421), L407 (= L423)

8cejA Succinyl-coa reductase from clostridium kluyveri (sucd) with mesaconyl-c1-coa (see paper)
39% identity, 95% coverage: 16:466/474 of query aligns to 3:449/449 of 8cejA

query
sites
8cejA

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R

E

L

I

T

A

N

M

A

A

I

N

Q

Y

G

M

Y

Y

Q

E

G

G

Q

A

G

G

H

H

S

T

C

A

G

G

I

I

Y

H

S

S

T

D

S

N

D

D

E

E

N

N

I

I

M

R

K

Y

L

A

A

G

A

T

G

V

T

L

K

P

T

I

S

S

R

R

V

L

M

V

V

V

N

N

Q

Q

P

P

Q

A

S

T

A

T

S

A

N

-

S
x
G

G

G

N

S

L

F

W

N

N

N

G

G

M

F

R

N

Q

P

T

T

F
x
T

S

T

L
|
L

G

G

C

C

G

G

S

S

W

W

G

G

G

R

N

N

G

S

T

I

N

S

N

E

N

N

V

L

T

T

W

Y

R

E

D

H

L

L

I

I

N

N

E

V

T

S

W

R

V

I

S

G

K

Y

P

F

L

N

A

K

Q

E

N

A

K

K

V

V

I

-

P

P

S

S

D

Y

A

E

E

E

L

I

F

W

G

G

binding (2e)-2-methylbut-2-enedioic acid: K66 (= K81), C238 (= C253), S239 (= S254), G394 (≠ S410), T405 (≠ F421), L407 (= L423)

P0A9Q7 Bifunctional aldehyde-alcohol dehydrogenase AdhE; Alcohol dehydrogenase E; EC 1.2.1.10; EC 1.1.1.1 from Escherichia coli (strain K12) (see 8 papers)
38% identity, 92% coverage: 14:450/474 of query aligns to 7:446/891 of P0A9Q7

query
sites
P0A9Q7

A

A

E

E

V

L

A

N

A

A

I

L

V

V

A

E

R

R

S

V

R

K

A

K

A

A

Q

Q

A

R

Q

E

I

Y

E

A

N

S

A

F

T

T

Q

Q

E

E

Q

Q

V

V

D

D

T

K

W

I

I

F

R

R

G

A

M

A

V

A

Y

L

A

A

V

A

C

A

K

D

P

A

G

R

M

I

D

-

E

-

E

P

I

L

A

A

R

K

E

M

T

A

V

V

E

A

E

E

T

S

Q

G

L

M

G

G

N

I

Y

V

E

E

G

D

K

K

F

V

K

I

K

K

I

N

S

H

V

F

K

A

T

S

R

E

A

Y

T

I

L

Y

Y

N

D

A

I

Y

I

K

D

D

D

E

K

K

S

T

V

C

G

G

I

V

I

L

E

S

E

E

D

D

A

D

A

T

R

F

N

G

I

T

V

I

K

T

L

I

A

A

K

E

P

P

V

I

G

G

V

I

I

I

G

C

A

G

L
x
I

S
x
V

P
|
P

S
x
T

T
|
T

N
|
N

P

P

E

T

A

S

T

T

P

A

V

I

I

F

K

K

A

S

I

L

S

I

A

S

V

L

K

K

G

T

R

R

N

N

S

A

I

I

I

I

V

F

C

S

P

P

H

H

P

P

R

R

A

A

K

K

L

D

I

A

N

T

A

N

K

K

I

A

C

A

N

D

L

I

M

V

R

L

D

Q

A

A

L

A

V

I

K

A

M

A

G

G

A

A

P

P

A

K

D

D

L

L

V

I

I

G

P

W

I

I

E

D

V

Q

P

P

S

S

V

V

E

E

K

L

T

S

N

N

E

A

V

L

M

M

K

H

Q

H

C

P

D

D

-

I

-

N

R

L

I

I

L

L

A

A

T

T

G

G

G
|
G

T

P

P

G

M

M

V

V

K

K

A

A

A

A

Y

Y

S

S

S

S

G

G

T

K

P

P

A

A

L

I

G

G

V

V

G
|
G

V

A

G

G

N

N

A

T

V

P

I

V

T

V

V

I

D

D

D

E

T

T

A

A

D

D

L

I

D

K

D

R

A

A

A

V

T

A

K

S

I

V

L

L

L

M

S

S

K

K

T

T

L

F

D

D

Y

N

A

G

A

V

S

I

C

C

S

A

S

S

D

E

N

Q

S

S

V

V

V

V

L

V

L

V

D

D

A

S

I

V

Y

Y

D

D

A

A

M

V

L

R

E

E

K

R

L

F

K
x
A

G

T

K

H

G

G

G

G

F

Y

V

L

I

L

E

Q

G

G

E

K

N

E

K

L

T

K

K

A

L

V

Q

Q

N

D

A

V

I

I

W

L

E

K

D

N

G

G

E

A

H

-

I

L

N

N

A

A

K

A

V

I

V

V

A

G

Q

Q

S

P

A

A

Q

Y

F

K

I

I

A

A

D

E

Y

L

A

A

G

G

F

F

E

S

I

V

P

P

E

E

N

N

T

T

A

K

F

I

F

L

I

I

V

G

P

E

E

V

T

T

G

V

Y

V

G

D

P

E

D

S

Y

E

K

P

F

F

S

A

G

H

E
|
E

K

K

M

L

T

S

V

P

T

T

M

L

A

A

L

M

Y

Y

R

R

A

A

K

K

D

D

I

F

E

E

D

D

A

A

I

V

R

E

L

K

T

A

N

E

A
x
K

I

L

Q

V

G

A

Y

M

Q

G

G

G

Q

I

G

G

H

H

S

T

C

S

G

C

I

L

Y

Y

S

T

T

D

S

Q

D

D

E

N

N

Q

-

P

-

A

-

R

I

V

M

S

K

Y

L

F

A

G

A

Q

G

K

T

M

K

K

T

T

S

A

R

R

V

I

M

L

V

I

N

N

Q

T

P

P

Q

A

S

S

A

Q

S

G

N

G

S

I

G

G

N

D

L

L

W

Y

N

N

-

F

G

K

M

L

R

A

Q

P

T

S

F

L

S

T

L
|
L

G

G

C

C

G

G

S

S

W

W

G

G

G

G

N

N

G

S

T

I

N

S

N

E

N

N

V

V

T

G

W

P

R

K

D

H

L

L

I

I

N

N

E

K

T

K

W

T

V

V

S

A

K
|
K

IVPTTN 110:115 (≠ LSPSTN 119:124) binding NAD(+)
G195 (= G202) binding NAD(+)
G213 (= G220) binding NAD(+)
A267 (≠ K274) mutation to T: Shows aerobic growth ability on ethanol. Shows 5-6 fold increase in acetaldehyde dehydrogenase activity, but does not affect ethanol dehydrogenase activity. Shows decreased thermal enzyme stability and increased sensitivity to MCO damage. Shows increased protein stability and resistance to MCO; when associated with K-568.
E335 (= E343) binding NAD(+)
K358 (≠ A366) modified: N6-acetyllysine
L419 (= L423) binding NAD(+)

Sites not aligning to the query:

1 modified: Initiator methionine, Removed
446:449 mutation Missing: Can form dimers, but does not assemble into long filaments. Strongly affects ALDH activity, but not ADH activity.
487 binding NAD(+)
519 binding NAD(+)
546:550 binding NAD(+)
568 E→K: Partially restores protein stability and resistance to MCO damage; when associated with T-267.
610 binding NAD(+)
619 binding NAD(+)
653 binding Fe cation
657 binding Fe cation
670 mutation F->A,E,V: Disrupts spirosome formation. Affects the forward activity of ALDH.
723 binding Fe cation
737 binding Fe cation

P0A9Q8 Bifunctional aldehyde-alcohol dehydrogenase AdhE; Alcohol dehydrogenase E; EC 1.2.1.10; EC 1.1.1.1 from Escherichia coli O157:H7 (see paper)
38% identity, 92% coverage: 14:450/474 of query aligns to 7:446/891 of P0A9Q8

query
sites
P0A9Q8

A

A

E

E

V

L

A

N

A

A

I

L

V

V

A

E

R

R

S

V

R

K

A

K

A

A

Q

Q

A

R

Q

E

I

Y

E

A

N

S

A

F

T

T

Q

Q

E

E

Q

Q

V

V

D

D

T

K

W

I

I

F

R

R

G

A

M

A

V

A

Y

L

A

A

V

A

C

A

K

D

P

A

G

R

M

I

D

-

E

-

E

P

I

L

A

A

R

K

E

M

T

A

V

V

E

A

E

E

T

S

Q

G

L

M

G

G

N

I

Y

V

E

E

G

D

K

K

F

V

K

I

K

K

I

N

S

H

V

F

K

A

T

S

R

E

A

Y

T

I

L

Y

Y

N

D

A

I

Y

I

K

D

D

D

E

K

K

S

T

V

C

G

G

I

V

I

L

E

S

E

E

D

D

A

D

A

T

R

F

N

G

I

T

V

I

K

T

L

I

A

A

K

E

P

P

V

I

G

G

V

I

I

I

G

C

A

G

L

I

S

V

P

P

S

T

T

T

N

N

P

P

E

T

A

S

T

T

P

A

V

I

I

F

K

K

A

S

I

L

S

I

A

S

V

L

K

K

G

T

R

R

N

N

S

A

I

I

I

I

V

F

C

S

P

P

H

H

P

P

R

R

A

A

K

K

L

D

I

A

N

T

A

N

K

K

I

A

C

A

N

D

L

I

M

V

R

L

D

Q

A

A

L

A

V

I

K

A

M

A

G

G

A

A

P

P

A

K

D

D

L

L

V

I

I

G

P

W

I

I

E

D

V

Q

P

P

S

S

V

V

E

E

K

L

T

S

N

N

E

A

V

L

M

M

K

H

Q

H

C

P

D

D

-

I

-

N

R

L

I

I

L

L

A

A

T

T

G

G

G

G

T

P

P

G

M

M

V

V

K

K

A

A

A

A

Y

Y

S

S

S

S

G

G

T

K

P

P

A

A

L

I

G

G

V

V

G

G

V

A

G

G

N

N

A

T

V

P

I

V

T

V

V

I

D

D

D

E

T

T

A

A

D

D

L

I

D

K

D

R

A

A

A

V

T

A

K

S

I

V

L

L

L

M

S

S

K

K

T

T

L

F

D

D

Y

N

A

G

A

V

S

I

C

C

S

A

S

S

D

E

N

Q

S

S

V

V

V

V

L

V

L

V

D

D

A

S

I

V

Y

Y

D

D

A

A

M

V

L

R

E

E

K

R

L

F

K

A

G

T

K

H

G

G

G

G

F

Y

V

L

I

L

E

Q

G

G

E

K

N

E

K

L

T

K

K

A

L

V

Q

Q

N

D

A

V

I

I

W

L

E

K

D

N

G

G

E

A

H

-

I

L

N

N

A

A

K

A

V

I

V

V

A

G

Q

Q

S

P

A

A

Q

Y

F

K

I

I

A

A

D

E

Y

L

A

A

G

G

F

F

E

S

I

V

P

P

E

E

N

N

T

T

A

K

F

I

F

L

I

I

V

G

P

E

E

V

T

T

G

V

Y

V

G

D

P

E

D

S

Y

E

K

P

F

F

S

A

G

H

E

E

K

K

M

L

T

S

V

P

T

T

M

L

A

A

L

M

Y

Y

R

R

A

A

K

K

D

D

I

F

E

E

D

D

A

A

I

V

R

E

L

K

T

A

N

E

A

K

I

L

Q

V

G

A

Y

M

Q

G

G

G

Q

I

G

G

H

H

S

T

C

S

G

C

I

L

Y

Y

S

T

T

D

S

Q

D

D

E

N

N

Q

-

P

-

A

-

R

I

V

M

S

K

Y

L

F

A

G

A

Q

G

K

T

M

K

K

T

T

S

A

R

R

V

I

M

L

V

I

N

N

Q

T

P

P

Q

A

S

S

A

Q

S

G

N

G

S

I

G

G

N

D

L

L

W

Y

N

N

-

F

G

K

M

L

R

A

Q

P

T

S

F

L

S

T

L

L

G

G

C

C

G

G

S

S

W

W

G

G

G

G

N

N

G

S

T

I

N

S

N

E

N

N

V

V

T

G

W

P

R

K

D

H

L

L

I

I

N

N

E

K

T

K

W

T

V

V

S

A

K

K

Sites not aligning to the query:

487 binding NAD(+)
519 binding NAD(+)
546:550 binding NAD(+)
597:598 binding NAD(+)
638 binding NAD(+)
653 binding Fe cation
657 binding Fe cation
723 binding Fe cation
737 binding Fe cation

7bvpA Adhe spirosome in extended conformation (see paper)
38% identity, 92% coverage: 14:450/474 of query aligns to 7:446/869 of 7bvpA

query
sites
7bvpA

A

A

E

E

V

L

A

N

A

A

I

L

V

V

A

E

R

R

S

V

R

K

A

K

A

A

Q

Q

A

R

Q

E

I

Y

E

A

N

S

A

F

T

T

Q

Q

E

E

Q

Q

V

V

D

D

T

K

W

I

I

F

R

R

G

A

M

A

V

A

Y

L

A

A

V

A

C

A

K

D

P

A

G

R

M

I

D

-

E

-

E

P

I

L

A

A

R

K

E

M

T

A

V

V

E

A

E

E

T

S

Q

G

L

M

G

G

N

I

Y

V

E

E

G

D

K

K

F

V

K

I

K

K

I

N

S

H

V

F

K

A

T

S

R

E

A

Y

T

I

L

Y

Y

N

D

A

I

Y

I

K

D

D

D

E

K

K

S

T

V

C

G

G

I

V

I

L

E

S

E

E

D

D

A

D

A

T

R

F

N

G

I

T

V

I

K

T

L

I

A

A

K

E

P

P

V

I

G

G

V

I

I

I

G

C

A

G

L

I

S

V

P
|
P

S
x
T

T

T

N

N

P

P

E

T

A

S

T

T

P

A

V

I

I

F

K

K

A

S

I

L

S

I

A

S

V

L

K

K

G

T

R

R

N

N

S

A

I

I

I

I

V

F

C

S

P

P

H
|
H

P

P

R

R

A

A

K

K

L

D

I

A

N

T

A

N

K

K

I

A

C

A

N

D

L

I

M

V

R

L

D

Q

A

A

L

A

V

I

K

A

M

A

G

G

A

A

P

P

A

K

D

D

L

L

V

I

I

G

P

W

I

I

E

D

V

Q

P

P

S

S

V

V

E

E

K

L

T

S

N

N

E

A

V

L

M

M

K

H

Q

H

C

P

D

D

-

I

-

N

R

L

I

I

L

L

A

A

T

T

G
|
G

G
|
G

T

P

P

G

M
|
M

V

V

K

K

A

A

A

A

Y

Y

S

S

S

S

G

G

T

K

P

P

A

A

L

I

G

G

V
|
V

G
|
G

V
x
A

G

G

N

N

A

T

V

P

I

V

T

V

V

I

D

D

D

E

T

T

A

A

D

D

L

I

D

K

D

R

A

A

A

V

T

A

K

S

I

V

L

L

L

M

S

S

K

K

T

T

L

F

D

D

Y

N

A

G

A

V

S

I

C
|
C

S

A

S

S

D

E

N

Q

S

S

V

V

V

V

L

V

L

V

D

D

A

S

I

V

Y

Y

D

D

A

A

M

V

L

R

E

E

K

R

L

F

K

A

G

T

K

H

G

G

G

G

F

Y

V

L

I

L

E

Q

G

G

E

K

N

E

K

L

T

K

K

A

L

V

Q

Q

N

D

A

V

I

I

W

L

E

K

D

N

G

G

E

A

H

-

I

L

N

N

A

A

K

A

V

I

V

V

A

G

Q

Q

S

P

A

A

Q

Y

F

K

I

I

A

A

D

E

Y

L

A

A

G

G

F

F

E

S

I

V

P

P

E

E

N

N

T

T

A

K

F

I

F

L

I

I

V

G

P

E

E

V

T

T

G

V

Y

V

G

D

P

E

D

S

Y

E

K

P

F

F

S

A

G

H

E
|
E

K

K

M
x
L

T

S

V

P

T

T

M

L

A

A

L

M

Y

Y

R

R

A

A

K

K

D

D

I

F

E

E

D

D

A

A

I

V

R

E

L

K

T

A

N

E

A

K

I

L

Q

V

G

A

Y

M

Q

G

G

G

Q

I

G

G

H
|
H

S

T

C

S

G

C

I

L

Y

Y

S

T

T

D

S

Q

D

D

E

N

N

Q

-

P

-

A

-

R

I

V

M

S

K

Y

L

F

A

G

A

Q

G

K

T

M

K

K

T

T

S

A

R

R

V

I

M

L

V

I

N

N

Q

T

P

P

Q

A

S

S

A

Q

S

G

N

G

S

I

G

G

N

D

L

L

W

Y

N

N

-

F

G

K

M

L

R

A

Q

P

T

S

F

L

S
x
T

L
|
L

G

G

C

C

G

G

S

S

W

W

G

G

G

G

N

N

G

S

T

I

N

S

N

E

N

N

V

V

T

G

W

P

R

K

D

H

L

L

I

I

N

N

E

K

T

K

W

T

V

V

S

A

K

K

binding nicotinamide-adenine-dinucleotide: P112 (= P121), T113 (≠ S122), H139 (= H148), G194 (= G201), G195 (= G202), M198 (= M205), V212 (= V219), G213 (= G220), A214 (≠ V221), C246 (= C253), E335 (= E343), L337 (≠ M345), H367 (= H375), T418 (≠ S422), L419 (= L423)

Sites not aligning to the query:

binding nicotinamide-adenine-dinucleotide: 487, 489, 519, 547, 550, 597, 598, 601, 610, 619, 646, 737
binding zinc ion: 653, 657, 723, 737

6tqmA Escherichia coli adhe structure in its compact conformation (see paper)
38% identity, 92% coverage: 14:450/474 of query aligns to 7:446/869 of 6tqmA

query
sites
6tqmA

A

A

E

E

V

L

A

N

A

A

I

L

V

V

A

E

R

R

S

V

R

K

A

K

A

A

Q

Q

A

R

Q

E

I

Y

E

A

N

S

A

F

T

T

Q

Q

E

E

Q

Q

V

V

D

D

T

K

W

I

I

F

R

R

G

A

M

A

V

A

Y

L

A

A

V

A

C

A

K

D

P

A

G

R

M

I

D

-

E

-

E

P

I

L

A

A

R

K

E

M

T

A

V

V

E

A

E

E

T

S

Q

G

L

M

G

G

N

I

Y

V

E

E

G

D

K

K

F

V

K

I

K

K

I

N

S

H

V

F

K

A

T

S

R

E

A

Y

T

I

L

Y

Y

N

D

A

I

Y

I

K

D

D

D

E

K

K

S

T

V

C

G

G

I

V

I

L

E

S

E

E

D

D

A

D

A

T

R

F

N

G

I

T

V

I

K

T

L

I

A

A

K

E

P

P

V

I

G

G

V

I

I

I

G

C

A

G

L

I

S

V

P

P

S

T

T

T

N

N

P

P

E

T

A

S

T

T

P

A

V

I

I

F

K

K

A

S

I

L

S

I

A

S

V

L

K

K

G

T

R

R

N

N

S

A

I

I

I

I

V

F

C

S

P

P

H

H

P

P

R

R

A

A

K

K

L

D

I

A

N

T

A

N

K

K

I

A

C

A

N

D

L

I

M

V

R

L

D

Q

A

A

L

A

V

I

K

A

M

A

G

G

A

A

P

P

A

K

D

D

L

L

V

I

I

G

P

W

I

I

E

D

V

Q

P

P

S

S

V

V

E

E

K

L

T

S

N

N

E

A

V

L

M

M

K

H

Q

H

C

P

D

D

-

I

-

N

R

L

I

I

L

L

A

A

T

T

G

G

G

G

T

P

P

G

M

M

V

V

K

K

A

A

A

A

Y

Y

S

S

S

S

G

G

T

K

P

P

A

A

L

I

G

G

V

V

G

G

V

A

G

G

N

N

A

T

V

P

I

V

T

V

V

I

D

D

D

E

T

T

A

A

D

D

L

I

D

K

D

R

A

A

A

V

T

A

K

S

I

V

L

L

L

M

S

S

K

K

T

T

L

F

D

D

Y

N

A

G

A

V

S

I

C

C

S

A

S

S

D

E

N

Q

S

S

V

V

V

V

L

V

L

V

D

D

A

S

I

V

Y

Y

D

D

A

A

M

V

L

R

E

E

K

R

L

F

K

A

G

T

K

H

G

G

G

G

F

Y

V

L

I

L

E

Q

G

G

E

K

N

E

K

L

T

K

K

A

L

V

Q

Q

N

D

A

V

I

I

W

L

E

K

D

N

G

G

E

A

H

-

I

L

N

N

A

A

K

A

V

I

V

V

A

G

Q

Q

S

P

A

A

Q

Y

F

K

I

I

A

A

D

E

Y

L

A

A

G

G

F

F

E

S

I

V

P

P

E

E

N

N

T

T

A

K

F

I

F

L

I

I

V

G

P

E

E

V

T

T

G

V

Y

V

G

D

P

E

D

S

Y

E

K

P

F

F

S

A

G

H

E

E

K

K

M

L

T

S

V

P

T

T

M

L

A

A

L

M

Y

Y

R

R

A

A

K

K

D

D

I

F

E

E

D

D

A

A

I

V

R

E

L

K

T

A

N

E

A

K

I

L

Q

V

G

A

Y

M

Q

G

G

G

Q

I

G

G

H

H

S

T

C

S

G

C

I

L

Y

Y

S

T

T

D

S

Q

D

D

E

N

N

Q

-

P

-

A

-

R

I

V

M

S

K

Y

L

F

A

G

A

Q

G

K

T

M

K

K

T

T

S

A

R

R

V

I

M

L

V

I

N

N

Q

T

P

P

Q

A

S

S

A

Q

S

G

N

G

S

I

G

G

N

D

L

L

W

Y

N

N

-

F

G

K

M

L

R

A

Q

P

T

S

F

L

S

T

L

L

G

G

C

C

G

G

S

S

W

W

G

G

G

G

N

N

G

S

T

I

N

S

N

E

N

N

V

V

T

G

W

P

R

K

D

H

L

L

I

I

N

N

E

K

T

K

W

T

V

V

S

A

K

K

Sites not aligning to the query:

5j7iB Crystal structure of a geobacillus thermoglucosidasius acetylating aldehyde dehydrogenase in complex with adp (see paper)
36% identity, 91% coverage: 15:444/474 of query aligns to 14:441/456 of 5j7iB

query
sites
5j7iB

E

E

V

V

A

R

A

N

I

Y

V

L

A

E

R

E

S

A

R

K

A

A

A

A

Q

Q

A

K

Q

I

I

L

E

E

N

K

A

M

T

T

Q

Q

E

S

Q

E

V

I

D

D

T

K

W

I

I

V

R

E

G

S

M

M

V

A

Y

N

A

A

V

A

C

R

K

E

P

E

G

A

M

-

D

-

E

G

E

R

I

L

A

A

R

A

E

M

T

A

V

V

E

E

E

E

T

T

Q

G

L

F

G

G

N

N

Y

V

E

E

G

D

K

K

F

T

K

L

K

K

I

N

S

L

V

F

K

A

T

A

R

N

A

D

T

V

L

Y

Y

N

D

S

I

I

I

K

D

D

D

V

K

K

S

T

V

V

G

G

I

I

I

I

E

R

E

R

D

D

A

E

A

E

R

N

N

R

I

V

V

W

K

E

L

I

A

A

K

Q

P

P

V

V

G

G

V

I

I

V

G

A

A

G

L

I

S

I

P

P

S

S

T

T

N

N

P

P

E

T

A

S

T

T

P

V

V

I

I

F

K

K

A

A

I

L

S

I

A

A

V

V

K

K

G

A

R

R

N

N

S

A

I

I

I

V

V

F

C

S

P

P

H

H

P

P

R

S

A

A

K

A

L

K

I

C

N

T

A

A

K

E

I

A

C

A

N

R

L

I

M

M

R

Q

D

E

A

A

L

A

V

E

K

R

M

A

G

G

A

A

P

P

A

K

D

G

L

L

V

I

I

S

P

C

I

I

E

T

V

Q

P

P

S

T

V

M

E

A

K

A

T

T

N

N

E

E

V

L

M

M

K

K

Q

H

-

K

-

L

C

T

D

D

R

V

I

I

L

L

A

A

T

T

G

G

G

G

T

P

P

G

M
x
L

V

V

K

K

A

A

A

A

Y

Y

S

S

S

S

G

G

T

K

P

P

A

A

L

Y

G

G

V

V

G

G

V

P

G

G

N

N

A

V

V

P

I

V

T

Y

V

I

D

H

D

E

T

S

A

A

D

N

L

I

D

A

D

K

A

A

A

V

T

Q

K

L

I

I

L

I

L

Q

S

S

K

K

T

T

L

F

D

D

Y

Y

A

G

A

T

S

I

C

C

S

A

S

S

D

E

N

Q

S

A

V

L

V

L

L

V

L

D

D

E

A

S

I

I

Y

K

D

E

A

K

M

V

L

V

E

A

K

E

L

L

K

K

G

Q

K

Q

G

G

G

A

F

Y

V

F

I

L

E

N

G

E

E

E

N

E

K

K

T

Q

K

K

L

V

Q

A

N

S

A

I

I

I

W

M

E

V

D

N

G

G

E

S

H

-

I

L

N

N

A
|
A

K

K

V

I

V

V

A

G

Q

K

S

A

A

P

Q

Q

F

V

I

I

A

A

D

E

Y

M

A

A

G

G

F

I

E

E

I

I

P

P

E

S

N

D

T

V

A

K

F

L

F

L

I

V

V

A

P

E

E

E

T

T

G

E

Y

V

G

G

P

K

D

E

Y

Y

K

P

F

F

S

S

G

I

E

E

K

K

M

L

T

S

V

P

T

I

M

L

A

A

L

F

Y

Y

R

I

A

V

K

K

D

G

I

M

E

E

D

E

A

A

I

S

R

E

L

L

T

A

N

Q

A

K

I

L

Q

L

G

E

Y

V

Q

G

G

G

Q

L

G

G

H

H

S

T

C

V

G

G

I

I

Y

H

S

A

T

E

S

D

D

E

E

K

N

V

I

I

M

E

K

A

L

Y

A

T

A

I

G

D

T

K

K

P

T

A

S

G

R

R

V

I

M

V

V

V

N

N

Q

A

P

G

Q

T

S

T

A

F

S

G

N

G

S

I

G

G

N

A

L

T

W

V

N

N

G

-

M

V

R

K

Q

P

T

S

F

L

S

T

L

L

G

G

C

C

G

G

S

A

W

I

G

G

G

N

N

N

G

I

T

T

N

S

N

D

N

N

V

V

T

T

W

V

R

T

D

H

L

L

I

F

N

N

binding adenosine-5-diphosphoribose: L204 (≠ M205), A300 (= A302)

5j7iC Crystal structure of a geobacillus thermoglucosidasius acetylating aldehyde dehydrogenase in complex with adp (see paper)
36% identity, 91% coverage: 15:444/474 of query aligns to 13:440/455 of 5j7iC

query
sites
5j7iC

E

E

V

V

A

R

A

N

I

Y

V

L

A

E

R

E

S

A

R

K

A

A

A

A

Q

Q

A

K

Q

I

I

L

E

E

N

K

A

M

T

T

Q

Q

E

S

Q

E

V

I

D

D

T

K

W

I

I

V

R

E

G

S

M

M

V

A

Y

N

A

A

V

A

C

R

K

E

P

E

G

A

M

-

D

-

E

G

E

R

I

L

A

A

R

A

E

M

T

A

V

V

E

E

E

E

T

T

Q

G

L

F

G

G

N

N

Y

V

E

E

G

D

K

K

F

T

K

L

K

K

I

N

S

L

V

F

K

A

T

A

R

N

A

D

T

V

L

Y

Y

N

D

S

I

I

I

K

D

D

D

V

K

K

S

T

V

V

G

G

I

I

I

I

E

R

E

R

D

D

A

E

A

E

R

N

N

R

I

V

V

W

K

E

L

I

A

A

K

Q

P

P

V

V

G

G

V

I

I

V

G

A

A

G

L

I

S

I

P

P

S

S

T

T

N

N

P

P

E

T

A

S

T

T

P

V

V

I

I

F

K

K

A

A

I

L

S

I

A

A

V

V

K

K

G

A

R

R

N

N

S

A

I

I

I

V

V

F

C

S

P

P

H
|
H

P
|
P

R

S

A

A

K

A

L

K

I

C

N

T

A

A

K

E

I

A

C

A

N

R

L

I

M

M

R

Q

D

E

A

A

L

A

V

E

K

R

M

A

G

G

A

A

P

P

A

K

D

G

L

L

V

I

I

S

P

C

I

I

E

T

V

Q

P

P

S

T

V

M

E

A

K

A

T

T

N

N

E

E

V

L

M

M

K

K

Q

H

-

K

-

L

C

T

D

D

R

V

I

I

L

L

A

A

T

T

G

G

G

G

T

P

P

G

M
x
L

V

V

K

K

A

A

A

A

Y

Y

S

S

S

S

G

G

T

K

P

P

A

A

L

Y

G

G

V

V

G

G

V

P

G

G

N

N

A

V

V

P

I

V

T

Y

V

I

D

H

D

E

T

S

A

A

D

N

L

I

D

A

D

K

A

A

A

V

T

Q

K

L

I

I

L

I

L

Q

S

S

K

K

T

T

L

F

D

D

Y

Y

A

G

A

T

S

I

C

C

S

A

S

S

D

E

N

Q

S

A

V

L

V

L

L

V

L

D

D

E

A

S

I

I

Y

K

D

E

A

K

M

V

L

V

E

A

K

E

L

L

K

K

G

Q

K

Q

G

G

G

A

F

Y

V

F

I

L

E

N

G

E

E

E

N

E

K

K

T

Q

K

K

L

V

Q

A

N

S

A

I

I

I

W

M

E

V

D

N

G

G

E

S

H

-

I

L

N

N

A

A

K

K

V

I

V

V

A

G

Q

K

S

A

A

P

Q

Q

F

V

I

I

A

A

D

E

Y

M

A

A

G

G

F

I

E

E

I

I

P

P

E

S

N

D

T

V

A

K

F

L

F

L

I

V

V

A

P

E

E

E

T

T

G

E

Y

V

G

G

P

K

D

E

Y

Y

K

P

F

F

S

S

G

I

E

E

K

K

M

L

T

S

V

P

T

I

M

L

A

A

L

F

Y

Y

R

I

A

V

K

K

D

G

I

M

E

E

D

E

A

A

I

S

R

E

L

L

T

A

N

Q

A

K

I

L

Q

L

G

E

Y

V

Q

G

G

G

Q

L

G

G

H

H

S

T

C

V

G

G

I

I

Y

H

S

A

T

E

S

D

D

E

E

K

N

V

I

I

M

E

K

A

L

Y

A

T

A

I

G

D

T

K

K

P

T

A

S

G

R

R

V

I

M

V

V

V

N

N

Q

A

P

G

Q

T

S

T

A

F

S

G

N

G

S

I

G

G

N

A

L

T

W

V

N

N

G

-

M

V

R

K

Q

P

T

S

F

L

S

T

L

L

G

G

C

C

G

G

S

A

W

I

G

G

G

N

N

N

G

I

T

T

N

S

N

D

N

N

V

V

T

T

W

V

R

T

D

H

L

L

I

F

N

N

binding adenosine-5'-diphosphate: H144 (= H148), P145 (= P149), L203 (≠ M205)

5jfmA Crystal structure of rhodopseudomonas palustris propionaldehyde dehydrogenase with bound propionyl-coa (see paper)
29% identity, 77% coverage: 41:407/474 of query aligns to 34:396/439 of 5jfmA

query
sites
5jfmA

W

F

I

V

R

Q

G

G

M

I

V

R

Y

D

A

V

V

I

C

L

K

N

P

Q

G

D

M

T

D

L

E

E

E

K

I

M

A

S

R

R

E

M

T

A

V

V

E

E

E

E

T

T

Q

G

L

M

G

G

N

N

Y

Y

E

E

G

H

K

K

F

L

K

I

K

K

I

N

S

R

V

L

K

A

T

G

R

E

A

K

T

T

L

-

Y

-

D

P

I

G

I

I

D

E

D

D

K

L

S

T

V

T

G

D

I

A

I

F

E

S

E

G

D

D

A

N

A

G

R

L

N

T

I

L

V

V

K

E

L

Y

A

S

K

-

P

P

V

F

G

G

V

V

I

I

G

G

A

A

L
x
I

S
x
T

P

P

S

T

T
|
T

N
|
N

P

P

E

T

A

E

T

T

P

I

V

V

I

C

K

N

A

S

I

I

S

G

A

M

V

L

K

A

G

A

R

G

N

N

S

S

I

V

I

V

V

F

C
x
S

P
|
P

H
|
H

P

P

R

R

A

A

K

R

L

Q

I

V

N

S

A

L

K

L

I

L

C

V

N

R

L

L

M

I

R

N

D

Q

A

K

L

L

V

A

K

A

M

L

G

G

A

A

P

P

A

E

D

N

L

L

V

V

I

V

P

T

I

V

E

E

V

K

P

P

S

S

V
x
I

E

E

K

N

T

T

N

N

E

A

V

M

M

M

-

A

-

H

K

P

Q

K

C

V

D

R

R

M

I

L

L

V

A

A

T
|
T

G
|
G

G
|
G

T

P

P

A

M

I

V

V

K

K

A

A

A

V

Y

L

S

S

S

T

G

G

T

K

P

K

A

A

L

I

G

G

V
x
A

G

G

V

A

G

G

N

N

A

P

V

P

I

V

T

V

V

V

D

D

D

E

T

T

A

A

D

N

L

I

D

E

D

K

A

A

A

A

T

C

K

D

I

I

L

V

L

N

S

G

K

C

T

S

L

F

D

D

Y

N

A

N

A

L

S
x
P

C
|
C

S

V

S

A

D

E

N

K

S

E

V

I

V

I

L

A

L

V

D

A

A

Q

I

I

Y

A

D

D

A

Y

M

L

L

I

E

F

K

N

L

L

K

K

G

K

K

N

G

G

G

A

F

Y

V

E

I

I

E

K

G

D

E

P

N

A

-

V

K

L

T

Q

K

Q

L

L

Q

Q

N

D

A

L

I

V

W

L

E

T

D

A

G

K

E

G

H

G

I

P

N

Q

A

T

K

K

V

C

V

V

A

G

Q

K

S

S

A

A

Q

V

F

W

I

L

A

L

D

S

Y

Q

A

I

G

G

F

I

E

S

I

V

P

D

E

A

N

S

T

I

A

K

F

I

F

I

I

L

-

M

-

E

V

V

P

P

E

R

T

-

G

-

Y

-

G

-

P

-

D

E

Y

H

K

P

F

F

S

V

G

Q

E

E

K

E

-

L

M

M

T

M

V

P

T

I

M

L

A

P

L

L

Y

V

R

R

A

V

K

E

D

T

I

V

E

D

D

D

A

A

I

I

R

D

L

L

T

-

N

-

A

A

I

I

Q

E

G

V

Y

E

Q

H

G

D

Q

N

G

R

H

H

S

T

C

A

G

I

I

M

Y

H

S

S

T

T

S

D

D

V

E

R

N

K

I

L

M

T

K

K

L

M

A

A

A

K

G

L

T

I

K

Q

T

T

S

T

R

I

V

F

M

V

V

K

N

N

Q

G

P

P

Q

S

S

Y

A

A

active site: T113 (= T123), A211 (≠ V219), C245 (= C253)
binding propionyl Coenzyme A: I109 (≠ L119), T110 (≠ S120), T113 (= T123), N114 (= N124), S136 (≠ C146), P137 (= P147), H138 (= H148), I174 (≠ V184), T192 (= T200), G193 (= G201), G194 (= G202), P244 (≠ S252), C245 (= C253)

5jfmB Crystal structure of rhodopseudomonas palustris propionaldehyde dehydrogenase with bound propionyl-coa (see paper)
29% identity, 77% coverage: 41:407/474 of query aligns to 47:409/452 of 5jfmB

query
sites
5jfmB

W

F

I

V

R

Q

G

G

M

I

V

R

Y

D

A

V

V

I

C

L

K

N

P

Q

G

D

M

T

D

L

E

E

E

K

I

M

A

S

R

R

E

M

T

A

V

V

E

E

E

E

T

T

Q

G

L

M

G

G

N

N

Y

Y

E

E

G

H

K

K

F

L

K

I

K

K

I

N

S

R

V

L

K

A

T

G

R

E

A

K

T

T

L

P

Y

G

D

-

I

-

I

I

D

E

D

D

K

L

S

T

V

T

G

D

I

A

I

F

E

S

E

G

D

D

A

N

A

G

R

L

N

T

I

L

V

V

K

E

L

Y

A

S

K

-

P

P

V

F

G

G

V

V

I

I

G

G

A

A

L
x
I

S

T

P
|
P

S
x
T

T
|
T

N
|
N

P

P

E

T

A

E

T

T

P

I

V

V

I

C

K

N

A

S

I

I

S

G

A

M

V

L

K

A

G

A

R

G

N

N

S

S

I

V

I

V

V

F

C

S

P
|
P

H
|
H

P

P

R

R

A

A

K

R

L

Q

I

V

N

S

A

L

K

L

I

L

C

V

N

R

L

L

M

I

R

N

D

Q

A

K

L

L

V

A

K

A

M

L

G

G

A

A

P

P

A

E

D

N

L

L

V

V

I

V

P

T

I

V

E

E

V

K

P

P

S
|
S

V
x
I

E

E

K

N

T
|
T

N

N

E

A

V

M

M

M

-

A

-

H

K

P

Q

K

C

V

D

R

R

M

I

L

L

V

A

A

T
|
T

G
|
G

G
|
G

T

P

P

A

M

I

V

V

K

K

A

A

A

V

Y

L

S

S

S

T

G

G

T

K

P

K

A

A

L

I

G

G

V
x
A

G

G

V

A

G

G

N

N

A

P

V

P

I

V

T

V

V

V

D

D

D

E

T

T

A

A

D

N

L

I

D

E

D

K

A

A

A

A

T

C

K

D

I

I

L

V

L

N

S

G

K

C

T

S

L

F

D

D

Y

N

A

N

A

L

S

P

C
|
C

S

V

S

A

D

E

N

K

S

E

V

I

V

I

L

A

L

V

D

A

A

Q

I

I

Y

A

D

D

A

Y

M

L

L

I

E

F

K

N

L

L

K