SitesBLAST
Comparing WP_059150049.1 NCBI__GCF_001046635.1:WP_059150049.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
7arcG Cryo-em structure of polytomella complex-i (peripheral arm) (see paper)
49% identity, 98% coverage: 3:659/672 of query aligns to 7:678/682 of 7arcG
- binding fe2/s2 (inorganic) cluster: R36 (= R32), C38 (= C34), Y39 (= Y35), G47 (= G43), C49 (= C45), R50 (= R46), C52 (= C48), C66 (= C63)
- binding iron/sulfur cluster: H98 (= H95), D101 (= D98), C102 (= C99), C105 (= C102), Q107 (= Q104), C111 (= C108), Q114 (= Q111), C150 (= C147), I151 (= I148), C153 (= C150), C156 (= C153), C200 (= C197), V202 (= V199), A204 (= A201), L205 (= L202)
- binding : K272 (≠ T269), Q274 (≠ R271), R275 (= R272), N277 (≠ D274), G539 (= G531), L579 (≠ P571)
7zm7A Cryoem structure of mitochondrial complex i from chaetomium thermophilum (inhibited by ddm) (see paper)
49% identity, 98% coverage: 3:659/672 of query aligns to 4:682/711 of 7zm7A
- binding fe2/s2 (inorganic) cluster: R33 (= R32), C35 (= C34), Y36 (= Y35), G44 (= G43), C46 (= C45), R47 (= R46), C49 (= C48), C63 (= C63)
- binding iron/sulfur cluster: H95 (= H95), D98 (= D98), C99 (= C99), C102 (= C102), Q104 (= Q104), G105 (= G105), C108 (= C108), Q111 (= Q111), C149 (= C147), I150 (= I148), C152 (= C150), T153 (= T151), C155 (= C153), I179 (= I177), C199 (= C197), V201 (= V199), L204 (= L202)
P29915 NADH-quinone oxidoreductase chain 3; NADH dehydrogenase I, chain 3; NDH-1, chain 3; EC 7.1.1.- from Paracoccus denitrificans (see 2 papers)
49% identity, 98% coverage: 3:658/672 of query aligns to 6:658/673 of P29915
- H106 (= H95) mutation to A: Very little incorporation of iron-sulfur centers into protein in E.coli.; mutation to C: Alters the EPR signal of the N5 cluster; all 3 iron-sulfur clusters are less stable in E.coli.
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
7qsoG Bovine complex i in lipid nanodisc, state 3 (slack) (see paper)
47% identity, 99% coverage: 3:669/672 of query aligns to 6:695/700 of 7qsoG
- binding fe2/s2 (inorganic) cluster: R35 (= R32), C37 (= C34), Y38 (= Y35), G46 (= G43), C48 (= C45), R49 (= R46), C51 (= C48), C65 (= C63)
- binding iron/sulfur cluster: H97 (= H95), D100 (= D98), C101 (= C99), C104 (= C102), Q106 (= Q104), G107 (= G105), C110 (= C108), Q113 (= Q111), C149 (= C147), I150 (= I148), Q151 (≠ H149), C152 (= C150), T153 (= T151), R154 (= R152), C155 (= C153), C199 (= C197), P200 (= P198), V201 (= V199), G202 (= G200), A203 (= A201)
7v2cM Active state complex i from q10 dataset (see paper)
48% identity, 99% coverage: 3:665/672 of query aligns to 5:690/690 of 7v2cM
- binding fe2/s2 (inorganic) cluster: C36 (= C34), Y37 (= Y35), G45 (= G43), C47 (= C45), R48 (= R46), C50 (= C48), C64 (= C63)
- binding magnesium ion: Q105 (= Q104), C198 (= C197), V200 (= V199)
- binding iron/sulfur cluster: H96 (= H95), D99 (= D98), C100 (= C99), C103 (= C102), Q105 (= Q104), C109 (= C108), Q112 (= Q111), C148 (= C147), C151 (= C150), T152 (= T151), R153 (= R152), C154 (= C153), C198 (= C197), V200 (= V199), A202 (= A201), L203 (= L202)
8eszS1 NADH-ubiquinone oxidoreductase chain 1 (see paper)
48% identity, 97% coverage: 3:657/672 of query aligns to 5:668/683 of 8eszS1
- binding fe2/s2 (inorganic) cluster: C36 (= C34), Y37 (= Y35), A44 (= A42), G45 (= G43), C47 (= C45), R48 (= R46), C50 (= C48), C64 (= C63)
- binding iron/sulfur cluster: H96 (= H95), D99 (= D98), C100 (= C99), C103 (= C102), C109 (= C108), Q112 (= Q111), C152 (= C147), I153 (= I148), H154 (= H149), C155 (= C150), T156 (= T151), R157 (= R152), C158 (= C153), I182 (= I177), C202 (= C197), P203 (= P198), V204 (= V199)
8bedG Cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (ci peripheral tip) (see paper)
48% identity, 98% coverage: 3:662/672 of query aligns to 19:687/687 of 8bedG