SitesBLAST
Comparing WP_061941349.1 NCBI__GCF_001584185.1:WP_061941349.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 15 hits to proteins with known functional sites (download)
6e9nA E. Coli d-galactonate:proton symporter in the inward open form (see paper)
24% identity, 91% coverage: 9:394/425 of query aligns to 1:389/409 of 6e9nA
P0AA76 D-galactonate transporter; D-galactonate/H(+) symporter from Escherichia coli (strain K12) (see paper)
25% identity, 95% coverage: 9:411/425 of query aligns to 12:427/430 of P0AA76
- Y29 (= Y26) binding D-galactonate
- D31 (= D28) mutation to N: Loss of galactonate transport activity.
- R32 (= R29) binding D-galactonate
- Y64 (= Y62) binding D-galactonate
- E118 (= E116) mutation to Q: Loss of galactonate transport activity.
- W358 (vs. gap) binding D-galactonate
Q03567 Uncharacterized transporter slc-17.2 from Caenorhabditis elegans (see paper)
25% identity, 95% coverage: 17:421/425 of query aligns to 21:470/493 of Q03567
- N69 (≠ T50) modified: carbohydrate, N-linked (GlcNAc...) asparagine
6e9oA E. Coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form (see paper)
24% identity, 91% coverage: 9:394/425 of query aligns to 4:373/393 of 6e9oA
Q8BN82 Sialin; H(+)/nitrate cotransporter; H(+)/sialic acid cotransporter; AST; Solute carrier family 17 member 5; Vesicular excitatory amino acid transporter; VEAT from Mus musculus (Mouse) (see paper)
26% identity, 60% coverage: 58:314/425 of query aligns to 115:386/495 of Q8BN82
- H183 (≠ L124) mutation to R: Abolishes sialic acid transporter activity. Does not affect L-aspartate and L-glutamate transporter activity.
Sites not aligning to the query:
- 39 R→C: Completely abolishes L-aspartate and L-glutamate transporter activity. Retains appreciable H(+)-coupled sialic acid transporter activity.
8u3gA Structure of naag-bound sialin (see paper)
25% identity, 60% coverage: 58:314/425 of query aligns to 54:325/427 of 8u3gA
Sites not aligning to the query:
8u3hA Structure of fmoc-leu-oh bound sialin (see paper)
25% identity, 60% coverage: 58:314/425 of query aligns to 52:323/425 of 8u3hA
Sites not aligning to the query:
Q9NRA2 Sialin; H(+)/nitrate cotransporter; H(+)/sialic acid cotransporter; AST; Membrane glycoprotein HP59; Solute carrier family 17 member 5; Vesicular excitatory amino acid transporter; VEAT from Homo sapiens (Human) (see 8 papers)
25% identity, 60% coverage: 58:314/425 of query aligns to 115:386/495 of Q9NRA2
- K136 (= K79) to E: in SD; alters intracellular localization, only partially targeted to lysosomes and mainly detected in LAMP1-negative vesicles and in the Golgi apparatus; completely devoid of L-aspartate and L-glutamate transporter activity, but retains appreciable H(+)-coupled sialic acid transporter activity; dbSNP:rs80338795
- H183 (≠ L124) to R: in ISSD; alters intracellular localization, only partially targeted to lysosomes and mainly detected in LAMP1-negative vesicles and in the Golgi apparatus; abolishes H(+)-coupled sialic acid transporter activity; has normal L-aspartate and L-glutamate transporter activity; dbSNP:rs119491109
- LL 198:199 (≠ AN 139:140) mutation to AA: Localizes in vesicular structures mainly concentrated in the perinuclear region.
- IL 266:267 (≠ LK 207:208) mutation to LA: Localizes in vesicular structures mainly concentrated in the perinuclear region.
- SSLR-N 268:272 (≠ AALDLE 209:214) natural variant: Missing (in ISSD; alters intracellular localization, only partially targeted to lysosomes and mainly detected in LAMP1-negative vesicles and in the Golgi apparatus; abolishes H(+)-coupled sialic acid transporter activity; has normal L-aspartate and L-glutamate transporter activity)
- G328 (= G270) to E: in ISSD; some patients may manifest a milder phenotype consistent with Salla disease; markedly decreases H(+)-coupled sialic acid transporter activity; abolishes L-aspartate and L-glutamate transporter activity; dbSNP:rs386833996
- P334 (= P276) to R: in ISSD; does not affect intracellular localization, targeted to lysosomes; abolishes H(+)-coupled sialic acid transporter activity; abolishes L-aspartate and L-glutamate transporter activity; dbSNP:rs119491110
- G371 (vs. gap) to V: in ISSD; abolishes H(+)-coupled sialic acid transporter activity; abolishes L-aspartate and L-glutamate transporter activity; dbSNP:rs777862172
Sites not aligning to the query:
- 22:23 Dileucine internalization motif; LL→AA: Targeted to plasma membrane.; LL→GG: Targeted to plasma membrane; sialic acid uptake strongly activated at acidic pH.
- 39 R → C: in SD; frequent variant in Finland; alters intracellular localization, only partially targeted to lysosomes and mainly detected in LAMP1-negative vesicles and in the Golgi apparatus; completely devoid of L-aspartate and L-glutamate transport activity, but retains appreciable H(+)-coupled sialic acid and nitrate transporter activity; dbSNP:rs80338794
Q5Q0U0 Sialin; H(+)/nitrate cotransporter; H(+)/sialic acid cotransporter; AST; Solute carrier family 17 (Anion/sugar transporter), member 5; Vesicular excitatory amino acid transporter; VEAT from Rattus norvegicus (Rat) (see 2 papers)
26% identity, 60% coverage: 58:314/425 of query aligns to 115:386/495 of Q5Q0U0
- K136 (= K79) mutation to E: Markedly decreases H(+)-coupled sialic acid transporter activity.
- R168 (= R109) mutation to C: Abolishes H(+)-coupled sialic acid transporter activity.
- E171 (≠ L112) mutation to C: Decreases H(+)-coupled sialic acid transporter activity; when associated with C-175.
- G172 (= G113) mutation to C: Decreases protein levels and alters subcellular localization.
- E175 (= E116) mutation to C: Decreases H(+)-coupled sialic acid transporter activity; when associated with C-171.
- G176 (≠ A117) mutation to C: Decreases protein levels and alters subcellular localization.
- F179 (≠ M120) mutation to C: Decreases the affinity and transport rate for D-glucuronate. Does not affect H(+)-coupled sialic acid transporter activity.
- P180 (= P121) mutation to C: Decreases protein levels and alters subcellular localization.
- H183 (≠ L124) mutation to R: Abolishes H(+)-coupled sialic acid transporter activity.
- W186 (≠ I127) mutation to C: Abolishes H(+)-coupled sialic acid transporter activity.
- SSLK-N 268:272 (≠ AALDLE 209:214) mutation Missing: Abolishes H(+)-coupled sialic acid transporter activity.
- P334 (= P276) mutation to R: Abolishes H(+)-coupled sialic acid transporter activity.
- G371 (vs. gap) mutation to V: Remains in the endoplasmic reticulum.
Sites not aligning to the query:
- 22:23 Dileucine internalization motif; LL→AA: Targeted to plasma membrane; sialic acid uptake strongly activated at acidic pH.
- 39 R→C: Markedly decreases H(+)-coupled sialic acid transporter activity.
Q9JI12 Vesicular glutamate transporter 2; VGluT2; Differentiation-associated BNPI; Differentiation-associated Na(+)-dependent inorganic phosphate cotransporter; Solute carrier family 17 member 6 from Rattus norvegicus (Rat) (see 2 papers)
23% identity, 83% coverage: 50:401/425 of query aligns to 123:486/582 of Q9JI12
- H128 (≠ G55) mutation to A: Greatly lowers L-glutamate transport.
- R184 (= R109) mutation R->A,E,K: Greatly lowers L-glutamate transport.
- E191 (= E116) mutation to A: Greatly lowers L-glutamate transport.; mutation E->D,Q: Lowers L-glutamate transport.
- R322 (≠ W243) mutation to A: Loss of L-glutamate release. Abolishes the chloride ion conductance.
Sites not aligning to the query:
- 88 R→A: Impairs synaptic transmission. Abolishes the chloride ion conductance.
7t3nA R184q/e191q mutant of rat vesicular glutamate transporter 2 (vglut2)
22% identity, 83% coverage: 50:401/425 of query aligns to 65:428/452 of 7t3nA
Sites not aligning to the query:
P53322 High-affinity nicotinic acid transporter; Nicotinic acid permease from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
22% identity, 76% coverage: 1:323/425 of query aligns to 80:411/534 of P53322
- K283 (≠ Q202) modified: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)
Q51955 4-hydroxybenzoate transporter PcaK from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
20% identity, 87% coverage: 9:377/425 of query aligns to 25:406/448 of Q51955
- D41 (≠ A25) mutation D->A,N: Abolishes 4-HBA transport.; mutation to E: Decrease in 4-HBA transport.
- D44 (= D28) mutation D->A,N: Abolishes 4-HBA transport.; mutation to E: Decrease in 4-HBA transport.
- G85 (≠ A70) mutation to V: Abolishes 4-HBA transport and chemotaxis.
- D89 (≠ E74) mutation to N: Abolishes 4-HBA transport and chemotaxis.
- G92 (≠ S77) mutation to A: Decrease in 4-HBA transport and chemotaxis.; mutation to C: No change in 4-HBA transport and chemotaxis.; mutation G->L,V: Abolishes 4-HBA transport and chemotaxis.; mutation to Q: Decrease in 4-HBA transport and strong decrease in chemotaxis.
- R124 (= R109) mutation to A: Abolishes 4-HBA transport.
- E144 (≠ N129) mutation to A: Strong decrease in 4-HBA transport.
- H183 (≠ R168) mutation to A: Decrease in 4-HBA transport and chemotaxis.
- D323 (= D292) mutation to N: Abolishes 4-HBA transport and chemotaxis.
- H328 (≠ R297) mutation to A: Decrease in 4-HBA transport and chemotaxis.; mutation to R: Decrease in 4-HBA transport and loss of chemotaxis.
- R386 (≠ A357) mutation to A: Strong decrease in 4-HBA transport.
- R398 (≠ A369) mutation to A: Abolishes 4-HBA transport.
Sites not aligning to the query:
- 444 H→A: No change in 4-HBA transport and chemotaxis.
Q9C0U9 Uncharacterized transporter PB1C11.03 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
25% identity, 42% coverage: 26:204/425 of query aligns to 114:296/570 of Q9C0U9
Sites not aligning to the query:
- 14 modified: Phosphoserine
Q9Y2C5 Probable small intestine urate exporter; Solute carrier family 17 member 4 from Homo sapiens (Human) (see 2 papers)
21% identity, 47% coverage: 100:299/425 of query aligns to 161:360/497 of Q9Y2C5
Sites not aligning to the query:
- 66 modified: carbohydrate, N-linked (GlcNAc...) asparagine; N→A: Loss of glycosylation and significant reduction in the transport of thyroid hormones T3 and T4; when associated with A-75 and A-90.
- 75 modified: carbohydrate, N-linked (GlcNAc...) asparagine; N→A: Loss of glycosylation and significant reduction in the transport of thyroid hormones T3 and T4; when associated with A-66 and A-90.
- 90 modified: carbohydrate, N-linked (GlcNAc...) asparagine; N→A: Loss of glycosylation and significant reduction in the transport of thyroid hormones T3 and T4; when associated with A-75 and A-90.
- 372 A → T: in dbSNP:rs11754288
Query Sequence
>WP_061941349.1 NCBI__GCF_001584185.1:WP_061941349.1
METRKLAMRRWWFIMPIVFITYSLAYLDRANFGFASAAGINHDLGITQGTSSLIGALFFI
GYFFFQIPGAIYAERRSVKKMIFWSLVLWGSCAALTGVISNIPMLMVIRFSLGVVEAAVM
PAMLIYISNWFTKNERSRANTFLILGNPVTVLWMSVLSGYLVNSFGWRHMMIAEGVPAIV
WACIWWFVVQDKPAESTWLQPQEKADLKAALDLEQVGMKPMRNYAEAFKSPAVIKLCAQY
FCWSIGVYGFVLWLPSILKNAANISMVETGWLSSLPYLVAVIAMLLTSWASDKMQNRKLF
VWPALLIGALAFLGSYLLGSSNFWLSYSLLVIAGAAMYAPYGPFFAIIPELLPKNVAGGA
MALINSMGALGSFLGSYVVGYLNGATGSPSASYLFMASGLLAAVVLTISIKPEAQAMPLA
QSVTQ
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory