Comparing WP_066328198.1 NCBI__GCF_900100165.1:WP_066328198.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7cwdA Crystal structure of beta-galactosidase ii from bacillus circulans in complex with beta-d-galactopyranosyl disaccharide (see paper)
44% identity, 95% coverage: 36:809/812 of query aligns to 5:799/803 of 7cwdA
5t99A Crystal structure of bugh2awt in complex with galactoisofagomine (see paper)
40% identity, 95% coverage: 37:811/812 of query aligns to 10:757/757 of 5t99A
4cu8A Unravelling the multiple functions of the architecturally intricate streptococcus pneumoniae beta-galactosidase, bgaa (see paper)
38% identity, 94% coverage: 30:796/812 of query aligns to 12:830/848 of 4cu8A
4cu7A Unravelling the multiple functions of the architecturally intricate streptococcus pneumoniae beta-galactosidase, bgaa (see paper)
38% identity, 94% coverage: 30:796/812 of query aligns to 12:830/848 of 4cu7A
4cucA Unravelling the multiple functions of the architecturally intricate streptococcus pneumoniae beta-galactosidase, bgaa. (see paper)
38% identity, 94% coverage: 30:796/812 of query aligns to 12:830/847 of 4cucA
7nitD X-ray structure of a multidomain bbgiii from bifidobacterium bifidum (see paper)
35% identity, 96% coverage: 23:800/812 of query aligns to 17:861/1253 of 7nitD
Sites not aligning to the query:
5dmyA Beta-galactosidase - construct 33-930
35% identity, 96% coverage: 23:800/812 of query aligns to 1:841/855 of 5dmyA
6qubA Truncated beta-galactosidase iii from bifidobacterium bifidum in complex with galactose
35% identity, 95% coverage: 29:800/812 of query aligns to 5:843/857 of 6qubA
6qudA 2-deoxy-galactose reaction intermediate of a truncated beta- galactosidase iii from bifidobacterium bifidum
35% identity, 95% coverage: 29:800/812 of query aligns to 5:823/837 of 6qudA
5t9gC Crystal structure of bugh2cwt in complex with galactoisofagomine (see paper)
34% identity, 96% coverage: 35:812/812 of query aligns to 1:811/811 of 5t9gC
T2KN75 Beta-glucuronidase; Glycosyl hydrolase 2 family protein P17; P17_GH2; Polysaccharide utilization locus H protein P17; PUL H protein P17; EC 3.2.1.31 from Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) (see paper)
28% identity, 89% coverage: 32:751/812 of query aligns to 26:738/981 of T2KN75
6hpdA The structure of a beta-glucuronidase from glycoside hydrolase family 2 (see paper)
28% identity, 89% coverage: 32:751/812 of query aligns to 8:720/955 of 6hpdA
6nzgA Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine (see paper)
28% identity, 79% coverage: 32:675/812 of query aligns to 2:647/837 of 6nzgA
6d50B Bacteroides uniforms beta-glucuronidase 2 bound to d-glucaro-1,5- lactone (see paper)
28% identity, 79% coverage: 32:675/812 of query aligns to 2:647/840 of 6d50B
5z1aA The crystal structure of bacteroides fragilis beta-glucuronidase in complex with uronic isofagomine
27% identity, 78% coverage: 37:672/812 of query aligns to 8:625/655 of 5z1aA
8dhlB Tannerella forsythia beta-glucuronidase (l2) (see paper)
29% identity, 73% coverage: 32:624/812 of query aligns to 2:588/853 of 8dhlB
Sites not aligning to the query:
8dhlA Tannerella forsythia beta-glucuronidase (l2) (see paper)
29% identity, 73% coverage: 32:624/812 of query aligns to 3:574/827 of 8dhlA
Sites not aligning to the query:
7kgyA Beta-glucuronidase from faecalibacterium prausnitzii bound to the inhibitor unc10201652-glucuronide (see paper)
25% identity, 72% coverage: 31:617/812 of query aligns to 13:583/593 of 7kgyA
6d7jA The crystal structure of parabacteroides merdae beta-glucuronidase (gus) with glycerol in active-site (see paper)
25% identity, 90% coverage: 61:787/812 of query aligns to 44:777/799 of 6d7jA
8getA R. Hominis 2 beta-glucuronidase bound to norquetiapine-glucuronide (see paper)
26% identity, 82% coverage: 32:696/812 of query aligns to 2:626/639 of 8getA
>WP_066328198.1 NCBI__GCF_900100165.1:WP_066328198.1
MVKGHKSVLQKIGTAAVLLFLVACASTKKESRIVADFNPDWNFKLGDYPTAIQADFNAND
WRALDLPHDWSIEGTFDKDSKTKQAQGFLPAGKGWYRKTFTLPENLANKSISVEFDGVFK
NSEVFINGHSLGMRPNGYISFAYELTPYLHFGTQKNIIAVKVDNDAQPNSRWYTGSGIYR
NVRLVASEKLHVAQWGTYVTTRGITKEKAIVDIDVDVKNGLGINKLFKLVSTILDKNNVE
VAKAISDGNIPANSILQVKQNTKIENPILWNTENPYLYKIVTKVYDGSTVVDTYETPLGV
RYFNFDAEKGFSLNGKPTKILGVCLHHDNGALGAVENIHAIRRKLTLLKEMGTNAIRMSH
NPHSLEMMKLCDEMGFIVQDEFTDVWKKKKVTNDYHKDWDAWHKQDLEDFIKRDRNHPSV
MMWSIGNEIREQFDSTGVRITRELAQIVKSLDKTRPVTSALTENEPQKNFIYQSGALDLL
GFNYKHADYATFPERFKGQKIVASESVSAYATRGHYDMPTDEIRFWPKKYGETFDGNSDL
TVTAYDNIASYWGTTHEENWKAAKKYDFIAGTFVWTGFDYIGEPDPYPYPARSSYFGIVD
LAGFPKDVYYMYQSEWSDKNVLHLLPHWNWKVGQLIDVWAYYNNADEVELFLNGKSLGSK
AKQGDELHIAWKVPFEAGTLKAVSRKAGKIVKETEIHTAGEAAKINLQADKTAIKNDGYH
LAYVTVTLQDKDGNALPKADNLINFKVSGGAKIVGVDNGYQASLEPFKANYRKLYNGKCL
VILQSNKKAENITLEATTAGNISLGTVNIKVE
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory