Comparing WP_068002934.1 NCBI__GCF_001623255.1:WP_068002934.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
29% identity, 71% coverage: 86:290/290 of query aligns to 79:281/281 of P94530
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
30% identity, 71% coverage: 85:290/290 of query aligns to 87:296/296 of P68183
4ki0F Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to maltohexaose (see paper)
28% identity, 43% coverage: 156:281/290 of query aligns to 357:490/490 of 4ki0F
Sites not aligning to the query:
P02916 Maltose/maltodextrin transport system permease protein MalF from Escherichia coli (strain K12) (see 4 papers)
28% identity, 43% coverage: 156:281/290 of query aligns to 372:505/514 of P02916
Sites not aligning to the query:
7cagA Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state (see paper)
23% identity, 93% coverage: 4:274/290 of query aligns to 3:276/285 of 7cagA
>WP_068002934.1 NCBI__GCF_001623255.1:WP_068002934.1
MAVRKEIQNPAFYALIAALVVMSVGPIALMLATSFKTNIDVYDASVPAFFFSPTIKNYET
VLCNFLWYEPAHVDYCDPTFGRALNNSLIVGLLSTGLTLTIGCMAAYALVRFQFMGRGTV
SMGTLLMRIVPPAVLLVPVFGIWTFQYGLDQTYAGIILIYTAMNLPFVIWILQSFIVQVP
IQLEEAARMDGANPFQVFFLVVLPIIQPGLAAAAIFTFRIAWNEFLLANALSGRSTRTAP
VTIVNSITEYDIDWGVIMATGMLLAIPPILFTFVASKQIITGMTAGAVKG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory