Comparing WP_068167494.1 NCBI__GCF_001592305.1:WP_068167494.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
32% identity, 95% coverage: 10:258/261 of query aligns to 4:253/254 of 1g6hA
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
32% identity, 95% coverage: 10:258/261 of query aligns to 4:253/253 of 1g9xB
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
31% identity, 95% coverage: 10:258/261 of query aligns to 2:235/240 of 6mjpA
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
33% identity, 95% coverage: 10:257/261 of query aligns to 2:236/241 of 4u00A
3c4jA Abc protein artp in complex with atp-gamma-s
31% identity, 95% coverage: 10:257/261 of query aligns to 3:238/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
31% identity, 95% coverage: 10:257/261 of query aligns to 3:238/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
31% identity, 95% coverage: 10:257/261 of query aligns to 3:238/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
31% identity, 95% coverage: 10:257/261 of query aligns to 3:238/242 of 2oljA
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
29% identity, 98% coverage: 6:260/261 of query aligns to 2:240/240 of 1ji0A
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
28% identity, 90% coverage: 13:246/261 of query aligns to 4:223/240 of 4ymuJ
6z5uK Cryo-em structure of the a. Baumannii mlabdef complex bound to appnhp (see paper)
29% identity, 91% coverage: 10:247/261 of query aligns to 2:227/253 of 6z5uK
7d0aB Acinetobacter mlafedb complex in adp-vanadate trapped vclose conformation (see paper)
29% identity, 91% coverage: 10:247/261 of query aligns to 4:229/263 of 7d0aB
7d08B Acinetobacter mlafedb complex in atp-bound vtrans1 conformation (see paper)
29% identity, 91% coverage: 10:247/261 of query aligns to 4:229/263 of 7d08B
2d62A Crystal structure of multiple sugar binding transport atp- binding protein
31% identity, 89% coverage: 15:246/261 of query aligns to 11:230/375 of 2d62A
2awnB Crystal structure of the adp-mg-bound e. Coli malk (crystallized with atp-mg) (see paper)
29% identity, 95% coverage: 11:259/261 of query aligns to 3:235/374 of 2awnB
3puyA Crystal structure of an outward-facing mbp-maltose transporter complex bound to amp-pnp after crystal soaking of the pretranslocation state (see paper)
29% identity, 95% coverage: 11:259/261 of query aligns to 3:235/371 of 3puyA
3puxA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-bef3 (see paper)
29% identity, 95% coverage: 11:259/261 of query aligns to 3:235/371 of 3puxA
3puwA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-alf4 (see paper)
29% identity, 95% coverage: 11:259/261 of query aligns to 3:235/371 of 3puwA
3puvA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-vo4 (see paper)
29% identity, 95% coverage: 11:259/261 of query aligns to 3:235/371 of 3puvA
P68187 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Escherichia coli (strain K12) (see 5 papers)
29% identity, 95% coverage: 11:259/261 of query aligns to 4:236/371 of P68187
Sites not aligning to the query:
>WP_068167494.1 NCBI__GCF_001592305.1:WP_068167494.1
MSQKKIGDVILDVQNISLRFGGVKALTDISFNVKEHEVRAIIGPNGAGKSSMLNCINGVY
QPQEGSINFRGKTFKHMNSRQVAEMGIARTFQNLALFKGMSVIDNIMTGRNLRIKSNLFL
QALRIGPAQREEEQHREYVEHIIDFLEIQAHRKTPVGQLPYGLQKRVDLGRALAMEPQVL
LLDEPMAGMNLEEKQDMSRFILDVNDEFGTTIVLIEHDMGVVMDISDRVVVLDYGKKIGD
GTPDEVRNNEEVISAYLGTSH
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory