SitesBLAST
Comparing WP_068174298.1 NCBI__GCF_001592305.1:WP_068174298.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
6a50A Structure of benzoylformate decarboxylases in complex with cofactor tpp
27% identity, 97% coverage: 17:522/523 of query aligns to 12:522/527 of 6a50A
- binding magnesium ion: N117 (≠ S123), L118 (= L124), R120 (= R126), D428 (= D422), N455 (= N449), T457 (≠ Q451)
- binding thiamine diphosphate: N23 (= N28), P24 (= P29), E47 (= E54), H70 (= H77), T377 (≠ G371), S378 (≠ T372), G401 (= G395), L403 (≠ I397), G427 (≠ S421), D428 (= D422), G429 (= G423), S430 (= S424), Y433 (= Y427), N455 (= N449), T457 (≠ Q451), Y458 (= Y452), G459 (≠ A453), M460 (≠ I454), L461 (= L459)
3f6bX Crystal structure of benzoylformate decarboxylase in complex with the pyridyl inhibitor paa (see paper)
27% identity, 97% coverage: 17:522/523 of query aligns to 11:521/525 of 3f6bX
- active site: G24 (= G30), E46 (= E54), L108 (≠ P116), L109 (= L117), T110 (= T118), N111 (≠ S119), G400 (= G395), D427 (= D422), N454 (= N449), T456 (≠ Q451), Y457 (= Y452), A459 (≠ E458), L460 (= L459)
- binding 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-2-[(1S,2E)-1-hydroxy-3-pyridin-3-ylprop-2-en-1-yl]-4-methyl-1,3-thiazol-3-ium: N22 (= N28), P23 (= P29), G24 (= G30), S25 (≠ T31), E46 (= E54), H69 (= H77)
Sites not aligning to the query:
5deiA Benzoylformate decarboxylase from pseudomonas putida
27% identity, 97% coverage: 17:522/523 of query aligns to 11:521/524 of 5deiA
- active site: N22 (= N28), G24 (= G30), S25 (≠ T31), N26 (≠ T32), E27 (= E33), E46 (= E54), H69 (= H77), L108 (≠ P116), L109 (= L117), T110 (= T118), N111 (≠ S119), Y159 (vs. gap), P253 (= P263), H280 (≠ F291), S375 (≠ G370), G400 (= G395), L402 (≠ I397), D427 (= D422), N454 (= N449), T456 (≠ Q451), Y457 (= Y452), A459 (≠ E458), L460 (= L459), F463 (≠ G462)
- binding bicarbonate ion: S25 (≠ T31), H69 (= H77), L109 (= L117)
- binding calcium ion: N185 (≠ Q180), D186 (≠ Q181), D427 (= D422), N454 (= N449), T456 (≠ Q451)
- binding magnesium ion: N116 (≠ S123), L117 (= L124), R119 (= R126)
- binding thiamine diphosphate: N22 (= N28), P23 (= P29), E46 (= E54), H69 (= H77), T376 (≠ G371), S377 (≠ T372), L402 (≠ I397), G426 (≠ S421), D427 (= D422), G428 (= G423), S429 (= S424), Y432 (= Y427), T456 (≠ Q451), Y457 (= Y452), G458 (≠ A453), A459 (≠ E458), L460 (= L459)
Sites not aligning to the query:
3fsjX Crystal structure of benzoylformate decarboxylase in complex with the inhibitor mbp (see paper)
27% identity, 97% coverage: 17:522/523 of query aligns to 11:521/524 of 3fsjX
- active site: G24 (= G30), S25 (≠ T31), E27 (= E33), E46 (= E54), H69 (= H77), L108 (≠ P116), L109 (= L117), T110 (= T118), N111 (≠ S119), H280 (≠ F291), G400 (= G395), D427 (= D422), N454 (= N449), T456 (≠ Q451), Y457 (= Y452), A459 (≠ E458), L460 (= L459)
- binding calcium ion: D427 (= D422), N454 (= N449), T456 (≠ Q451)
- binding 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(S)-hydroxy[(R)-hydroxy(methoxy)phosphoryl]phenylmethyl}-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium: H280 (≠ F291), T376 (≠ G371), S377 (≠ T372), F396 (≠ T391), G400 (= G395), L402 (≠ I397), G426 (≠ S421), D427 (= D422), G428 (= G423), S429 (= S424), Y432 (= Y427), T456 (≠ Q451), Y457 (= Y452), G458 (≠ A453), A459 (≠ E458), L460 (= L459), F463 (≠ G462)
Sites not aligning to the query:
1mczA Benzoylformate decarboxylase from pseudomonas putida complexed with an inhibitor, r-mandelate (see paper)
27% identity, 97% coverage: 17:522/523 of query aligns to 11:521/524 of 1mczA
- active site: N22 (= N28), G24 (= G30), S25 (≠ T31), N26 (≠ T32), E27 (= E33), E46 (= E54), H69 (= H77), L108 (≠ P116), L109 (= L117), T110 (= T118), N111 (≠ S119), Y159 (vs. gap), P253 (= P263), H280 (≠ F291), S375 (≠ G370), G400 (= G395), L402 (≠ I397), D427 (= D422), N454 (= N449), T456 (≠ Q451), Y457 (= Y452), A459 (≠ E458), L460 (= L459), F463 (≠ G462)
- binding magnesium ion: N116 (≠ S123), L117 (= L124), R119 (= R126), D427 (= D422), N454 (= N449), T456 (≠ Q451)
- binding (r)-mandelic acid: S25 (≠ T31), H69 (= H77), L109 (= L117), H280 (≠ F291), T376 (≠ G371), F463 (≠ G462)
- binding thiamine diphosphate: N22 (= N28), P23 (= P29), E46 (= E54), H69 (= H77), T376 (≠ G371), S377 (≠ T372), G400 (= G395), L402 (≠ I397), G426 (≠ S421), D427 (= D422), G428 (= G423), S429 (= S424), Y432 (= Y427), Y457 (= Y452), G458 (≠ A453), A459 (≠ E458), L460 (= L459)
Sites not aligning to the query:
3fznA Intermediate analogue in benzoylformate decarboxylase (see paper)
27% identity, 97% coverage: 17:522/523 of query aligns to 11:521/523 of 3fznA
- active site: N22 (= N28), G24 (= G30), S25 (≠ T31), N26 (≠ T32), E27 (= E33), E46 (= E54), H69 (= H77), L108 (≠ P116), L109 (= L117), T110 (= T118), N111 (≠ S119), Y159 (vs. gap), P253 (= P263), H280 (≠ F291), S375 (≠ G370), G400 (= G395), L402 (≠ I397), D427 (= D422), N454 (= N449), T456 (≠ Q451), Y457 (= Y452), A459 (≠ E458), L460 (= L459), F463 (≠ G462)
- binding 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(S)-hydroxy[(R)-hydroxy(methoxy)phosphoryl]phenylmethyl}-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium: N22 (= N28), P23 (= P29), G24 (= G30), S25 (≠ T31), E46 (= E54), H69 (= H77), H280 (≠ F291), T376 (≠ G371), S377 (≠ T372), G400 (= G395), L402 (≠ I397), G426 (≠ S421), D427 (= D422), G428 (= G423), S429 (= S424), Y432 (= Y427), N454 (= N449), T456 (≠ Q451), Y457 (= Y452), G458 (≠ A453), A459 (≠ E458)
- binding magnesium ion: D427 (= D422), N454 (= N449), T456 (≠ Q451)
- binding phosphate ion: Q286 (≠ S298), L288 (= L300), K289 (≠ V301), P290 (= P302)
1bfdA Benzoylformate decarboxylase from pseudomonas putida (see paper)
27% identity, 97% coverage: 17:522/523 of query aligns to 11:521/523 of 1bfdA
- active site: N22 (= N28), G24 (= G30), S25 (≠ T31), N26 (≠ T32), E27 (= E33), E46 (= E54), H69 (= H77), L108 (≠ P116), L109 (= L117), T110 (= T118), N111 (≠ S119), Y159 (vs. gap), P253 (= P263), H280 (≠ F291), S375 (≠ G370), G400 (= G395), L402 (≠ I397), D427 (= D422), N454 (= N449), T456 (≠ Q451), Y457 (= Y452), A459 (≠ E458), L460 (= L459), F463 (≠ G462)
- binding calcium ion: D427 (= D422), N454 (= N449), T456 (≠ Q451)
- binding magnesium ion: N116 (≠ S123), L117 (= L124), R119 (= R126)
- binding thiamine diphosphate: T376 (≠ G371), S377 (≠ T372), L402 (≠ I397), G426 (≠ S421), D427 (= D422), G428 (= G423), S429 (= S424), Y432 (= Y427), T456 (≠ Q451), Y457 (= Y452), G458 (≠ A453), A459 (≠ E458), L460 (= L459)
1pi3A E28q mutant benzoylformate decarboxylase from pseudomonas putida
27% identity, 97% coverage: 17:522/523 of query aligns to 11:521/523 of 1pi3A
- active site: N22 (= N28), G24 (= G30), S25 (≠ T31), N26 (≠ T32), Q27 (≠ E33), E46 (= E54), H69 (= H77), L108 (≠ P116), L109 (= L117), T110 (= T118), N111 (≠ S119), Y159 (vs. gap), P253 (= P263), H280 (≠ F291), S375 (≠ G370), G400 (= G395), L402 (≠ I397), D427 (= D422), N454 (= N449), T456 (≠ Q451), Y457 (= Y452), A459 (≠ E458), L460 (= L459), F463 (≠ G462)
- binding calcium ion: D427 (= D422), N454 (= N449), T456 (≠ Q451)
- binding magnesium ion: N116 (≠ S123), L117 (= L124), R119 (= R126)
- binding 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-2-oxo-2,3-dihydro-1,3-thiazol-5-yl}ethyl trihydrogendiphosphate: T376 (≠ G371), S377 (≠ T372), L402 (≠ I397), G426 (≠ S421), G428 (= G423), S429 (= S424), Y432 (= Y427), N454 (= N449), T456 (≠ Q451), Y457 (= Y452), G458 (≠ A453), A459 (≠ E458), L460 (= L459)
6qsiA Pseudomonas fluorescens pf-5 thiamine diphosphate-dependent 4- hydroxybenzoylformate decarboxylase (see paper)
28% identity, 97% coverage: 17:521/523 of query aligns to 11:520/525 of 6qsiA
- active site: N22 (= N28), G24 (= G30), S25 (≠ T31), N26 (≠ T32), E27 (= E33), E46 (= E54), H69 (= H77), M108 (≠ P116), L109 (= L117), A110 (≠ T118), Y159 (≠ A166), P253 (= P263), H280 (≠ Y293), S375 (≠ G370), G400 (= G395), L402 (≠ I397), Y457 (= Y452), A459 (≠ E458), L460 (= L459), F463 (≠ G462)
- binding thiamine diphosphate: N22 (= N28), P23 (= P29), E46 (= E54), H69 (= H77), T376 (≠ G371), S377 (≠ T372), L402 (≠ I397), G426 (≠ S421), G428 (= G423), S429 (= S424), Y432 (= Y427), N454 (= N449), T456 (≠ Q451), Y457 (= Y452), G458 (≠ N457), A459 (≠ E458), L460 (= L459)
7orxCCC jostii RHA1 thiamine diphosphate-dependent 4-hydroxybenzoylformate decarboxylase
28% identity, 96% coverage: 21:521/523 of query aligns to 19:524/531 of 7orxCCC
- active site: N26 (= N28), G28 (= G30), S29 (≠ T31), N30 (≠ T32), E31 (= E33), E50 (= E54), H73 (= H77), M112 (≠ P116), L113 (= L117), S114 (≠ T118), N115 (≠ S119), Y163 (≠ A166), P257 (= P263), H284 (≠ F291), S379 (≠ G370), G404 (= G395), L406 (≠ I397), D431 (= D422), N458 (= N449), T460 (≠ Q451), Y461 (= Y452), A463 (≠ I454), L464 (= L455), F467 (≠ G463)
- binding thiamine diphosphate: N26 (= N28), S29 (≠ T31), E50 (= E54), H73 (= H77), T380 (≠ G371), S381 (≠ T372), G404 (= G395), L406 (≠ I397), G430 (≠ S421), G432 (= G423), S433 (= S424), Y436 (= Y427), N458 (= N449), T460 (≠ Q451), Y461 (= Y452), G462 (≠ A453)
4q9dB X-ray structure of a putative thiamin diphosphate-dependent enzyme isolated from mycobacterium smegmatis (see paper)
26% identity, 95% coverage: 21:519/523 of query aligns to 17:513/519 of 4q9dB
- active site: N24 (= N28), G26 (= G30), S27 (≠ T31), T28 (= T32), E29 (= E33), Q47 (= Q53), E48 (= E54), H71 (= H77), V107 (≠ Y113), D108 (= D114), Y110 (≠ P116), L111 (= L117), N112 (≠ T118), N113 (≠ S119), L161 (≠ A166), P252 (= P263), Y279 (≠ F291), M374 (≠ V368), S376 (≠ G370), G401 (= G395), I403 (= I397), D432 (= D422), N459 (= N449), E461 (≠ Q451), Y462 (= Y452), I464 (= I454)
- binding magnesium ion: D432 (= D422), N459 (= N449), E461 (≠ Q451)
Sites not aligning to the query:
4k9qA The crystal structure of benzoylformate decarboxylase from polynucleobacter necessarius
25% identity, 95% coverage: 22:519/523 of query aligns to 17:520/531 of 4k9qA
- active site: N23 (= N28), G25 (= G30), S26 (≠ T31), T27 (= T32), E28 (= E33), E47 (= E54), H70 (= H77), N106 (≠ D114), E107 (≠ S115), L110 (≠ T118), T111 (≠ S119), L160 (≠ A166), T251 (≠ P263), Y278 (≠ F291), V370 (= V368), C373 (≠ G371), G398 (= G395), L400 (≠ I397), D429 (= D422), N456 (= N449), E458 (≠ Q451), Y459 (= Y452), G460 (≠ A453), I461 (= I454), L462 (= L455), F465 (vs. gap)
- binding magnesium ion: D429 (= D422), N456 (= N449), E458 (≠ Q451)
- binding thiamine diphosphate: P374 (≠ T372), S375 (≠ C373), L400 (≠ I397), G428 (≠ S421), D429 (= D422), G430 (= G423), S431 (= S424), Y434 (= Y427), N456 (= N449), E458 (≠ Q451), Y459 (= Y452), G460 (≠ A453), I461 (= I454), L462 (= L455)
Sites not aligning to the query:
7tzzA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase p197t mutant in complex with bispyribac-sodium (see paper)
25% identity, 98% coverage: 9:521/523 of query aligns to 14:554/582 of 7tzzA
- binding 2,6-bis[(4,6-dimethoxypyrimidin-2-yl)oxy]benzoic acid: M266 (≠ L237), R292 (= R261), W489 (≠ N457)
- binding 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-[(1~{S})-1-(dioxidanyl)-1-oxidanyl-ethyl]-4-methyl-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate: V400 (≠ G370), G401 (= G371), Q402 (≠ T372), H403 (≠ C373), G426 (= G395), M428 (≠ I397), G452 (≠ S421), D453 (= D422), G454 (= G423), S455 (= S424), L483 (≠ Q451), G484 (≠ Y452), M485 (≠ A453), V486 (≠ I454)
- binding flavin-adenine dinucleotide: R161 (≠ Q158), G222 (= G215), G223 (= G216), G224 (= G217), T246 (vs. gap), L247 (vs. gap), M248 (vs. gap), M263 (≠ C234), L264 (≠ A235), M266 (≠ L237), H267 (≠ G238), G286 (= G255), R288 (≠ P257), V293 (vs. gap), D310 (vs. gap), I311 (≠ L273), D329 (≠ E304), V330 (≠ R305), M405 (≠ Y375), G423 (≠ T393)
- binding magnesium ion: A37 (≠ T32), T82 (≠ H77), S83 (≠ L78), Q122 (≠ L117), Y381 (≠ I352), D453 (= D422), M458 (≠ Y427), Q461 (= Q430), N480 (= N449), H482 (= H450), K533 (≠ S500)
Sites not aligning to the query:
6lpiB Crystal structure of ahas holo-enzyme (see paper)
22% identity, 100% coverage: 2:523/523 of query aligns to 1:519/539 of 6lpiB
- active site: I27 (≠ N28), G29 (= G30), G30 (≠ T31), S31 (≠ T32), I32 (≠ E33), E53 (= E54), C76 (≠ H77), F115 (≠ P116), Q116 (≠ L117), E117 (≠ T118), K165 (≠ H168), M256 (≠ L256), A283 (vs. gap), V375 (≠ G370), G401 (= G395), M403 (≠ I397), D428 (= D422), N455 (= N449), A457 (≠ Q451), L458 (≠ Y452), L460 (≠ I454), V461 (≠ L455), Q464 (≠ E458)
- binding flavin-adenine dinucleotide: R155 (≠ Q158), G212 (= G214), G213 (= G215), G214 (= G216), T236 (≠ L233), L237 (≠ C234), M238 (≠ A235), L254 (≠ Q254), M256 (≠ L256), H257 (≠ P257), G276 (= G283), A277 (= A284), R278 (≠ Y290), D280 (≠ G292), R282 (≠ E294), A283 (vs. gap), D300 (vs. gap), I301 (vs. gap), D319 (= D325), V320 (≠ L326), M380 (≠ Y375), G398 (≠ T393)
- binding magnesium ion: D428 (= D422), N455 (= N449)
- binding thiamine diphosphate: E53 (= E54), C76 (≠ H77), P79 (= P80), G376 (= G371), Q377 (≠ T372), H378 (≠ C373), G401 (= G395), M403 (≠ I397), G427 (≠ S421), D428 (= D422), G429 (= G423), S430 (= S424), M433 (≠ Y427), N455 (= N449), A457 (≠ Q451), L458 (≠ Y452), G459 (≠ A453), L460 (≠ I454), V461 (≠ L455)
1y9dD Pyruvate oxidase variant v265a from lactobacillus plantarum (see paper)
24% identity, 98% coverage: 12:523/523 of query aligns to 8:511/560 of 1y9dD
- active site: I24 (≠ N28), G26 (= G30), G27 (≠ T31), S28 (≠ T32), I29 (≠ E33), E51 (= E54), S74 (≠ H77), E108 (≠ L111), V155 (≠ A166), R241 (vs. gap), V361 (≠ G370), A387 (≠ G395), M389 (≠ I397), D414 (= D422), N441 (= N449), Q443 (= Q451), Y444 (= Y452), F446 (≠ I454), I447 (≠ L455), E450 (= E458)
- binding flavin-adenine dinucleotide: I198 (≠ G215), G199 (= G216), T221 (= T245), P223 (= P247), G261 (= G283), N262 (≠ A284), N263 (≠ L285), D273 (vs. gap), I274 (vs. gap), K278 (vs. gap), D292 (≠ P302), A293 (= A303)
- binding magnesium ion: D414 (= D422), N441 (= N449), Q443 (= Q451)
- binding thiamine diphosphate: E51 (= E54), S74 (≠ H77), P77 (= P80), H81 (≠ N84), D363 (≠ T372), M389 (≠ I397), G413 (≠ S421), G415 (= G423), N441 (= N449), Q443 (= Q451), Y444 (= Y452), G445 (≠ A453), F446 (≠ I454), I447 (≠ L455)
Sites not aligning to the query:
4rjkF Acetolactate synthase from bacillus subtilis bound to lthdp - crystal form ii (see paper)
24% identity, 98% coverage: 9:521/523 of query aligns to 3:529/552 of 4rjkF
- binding magnesium ion: D437 (= D422), D464 (≠ N449), T466 (≠ Q451)
- binding pyruvic acid: A25 (≠ T31), K26 (≠ E33)
- binding thiamine diphosphate: P23 (= P29), E47 (= E54), P73 (= P80), G385 (= G371), S386 (≠ T372), H387 (≠ C373), Q410 (≠ G395), L412 (≠ I397), G436 (≠ S421), D437 (= D422), G438 (= G423), G439 (≠ S424), T466 (≠ Q451), Y467 (= Y452), D468 (≠ A453), M469 (≠ I454), V470 (≠ L455)
Sites not aligning to the query:
4rjkG Acetolactate synthase from bacillus subtilis bound to lthdp - crystal form ii (see paper)
24% identity, 98% coverage: 9:521/523 of query aligns to 3:529/553 of 4rjkG
- binding magnesium ion: D437 (= D422), D464 (≠ N449), T466 (≠ Q451)
- binding 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-(1-carboxy-1-hydroxyethyl)-5-(2-{[hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium: E47 (= E54), Q110 (≠ L117)
- binding thiamine diphosphate: I384 (≠ G370), G385 (= G371), S386 (≠ T372), H387 (≠ C373), Q410 (≠ G395), L412 (≠ I397), G436 (≠ S421), D437 (= D422), G438 (= G423), G439 (≠ S424), T466 (≠ Q451), Y467 (= Y452), D468 (≠ A453), M469 (≠ I454), V470 (≠ L455)
Sites not aligning to the query:
4rjiC Acetolactate synthase from bacillus subtilis bound to thdp - crystal form i (see paper)
24% identity, 98% coverage: 9:521/523 of query aligns to 4:530/555 of 4rjiC
- binding magnesium ion: D438 (= D422), D465 (≠ N449), T467 (≠ Q451)
- binding thiamine diphosphate: P24 (= P29), E48 (= E54), P74 (= P80), S387 (≠ T372), H388 (≠ C373), Q411 (≠ G395), G437 (≠ S421), D438 (= D422), G439 (= G423), G440 (≠ S424), T467 (≠ Q451), Y468 (= Y452), D469 (≠ A453), M470 (≠ I454), V471 (≠ L455)
Sites not aligning to the query:
2djiA Crystal structure of pyruvate oxidase from aerococcus viridans containing fad (see paper)
22% identity, 96% coverage: 12:512/523 of query aligns to 9:523/590 of 2djiA
- active site: I25 (≠ N28), S27 (≠ G30), G28 (≠ T31), T29 (= T32), L30 (≠ E33), E52 (= E54), S75 (≠ H77), F114 (≠ P116), Q115 (≠ L117), G163 (≠ A166), R257 (= R261), E284 (vs. gap), V387 (≠ G370), A413 (≠ G395), M415 (≠ I397), D440 (= D422), N467 (= N449), E469 (≠ Q451), Y470 (= Y452), F472 (≠ I454), I473 (≠ L455), K476 (≠ E458)
- binding flavin-adenine dinucleotide: G213 (= G214), I214 (≠ G215), G215 (= G216), T237 (= T240), G238 (≠ A241), K239 (≠ Y242), T255 (≠ P257), Y256 (≠ A258), R257 (= R261), V258 (≠ L262), G277 (= G283), S278 (≠ A284), N279 (≠ L285), F280 (≠ P286), P281 (= P287), F282 (≠ V288), D299 (≠ E294), I300 (≠ G295), M304 (≠ L299), D318 (= D315), A319 (= A316), P410 (vs. gap)
Sites not aligning to the query:
1v5gA Crystal structure of the reaction intermediate between pyruvate oxidase containing fad and tpp, and substrate pyruvate (see paper)
22% identity, 96% coverage: 12:512/523 of query aligns to 8:522/589 of 1v5gA
- binding flavin-adenine dinucleotide: G212 (= G214), I213 (≠ G215), G214 (= G216), T236 (= T240), G237 (≠ A241), K238 (≠ Y242), T254 (≠ P257), Y255 (≠ A258), R256 (= R261), V257 (≠ L262), G276 (= G283), S277 (≠ A284), N278 (≠ L285), F279 (≠ P286), F281 (≠ V288), D298 (≠ E294), I299 (≠ G295), M303 (≠ L299), D317 (= D315), A318 (= A316), P409 (vs. gap)
- binding 2-acetyl-thiamine diphosphate: V386 (≠ G370), N388 (≠ T372), M414 (≠ I397), G438 (≠ S421), G440 (= G423), A441 (≠ S424), N466 (= N449), E468 (≠ Q451), Y469 (= Y452), A470 (= A453), F471 (≠ I454), I472 (≠ L455)
- binding magnesium ion: D439 (= D422), N466 (= N449), E468 (≠ Q451)
Query Sequence
>WP_068174298.1 NCBI__GCF_001592305.1:WP_068174298.1
MTNRKDMTGADALLAALADEGVTVCFANPGTTELDLVRSLEREERMRCVVGLQENVCTGG
ADGYGRMTGRPAATLLHLGPGFANGIANLHNARRAHTPIVNLIGDHTSWHLPYDSPLTSD
IESLARPVSGWVHRIAAVEQSDAAGREAVKQSLARGGQGATLIFPADHQAHTGGEQVALQ
QPAADVGAEVPAAFDPVAAVQRLKAANRIVFLLGGGGELSGLGVRAQKAVQRLCAALGAT
AYAETFPSRSERGQGLPAFDRLPYFPEPAREVLDPADLVVLVGALPPVTYFGYEGHPSLL
VPAERLLKLAAVGDDAATRLEQVADLLGAVEVAIPVAVLSPPEEGPLTPARIALALANEL
PERAIVSVEGGTCGYPFYAVSAAARPHTTLTNTGGAIGQGLPVAMGAAIACPNRQVVALL
SDGSTQYTIQTLWSLAHEDLDVVVLIAANHQYAILRNELRRGGAVLGNRAAEITSLDKPR
IDWVTLAQSYGVPGGRATTSSELTALLRQAFAKRGPMLIEMAL
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory