Comparing WP_068175025.1 NCBI__GCF_001592305.1:WP_068175025.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3pckM Structure of protocatechuate 3,4-dioxygenase complexed with 6- hydroxynicotinic acid n-oxide (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:224/233 of 3pckM
Sites not aligning to the query:
3pcjM Structure of protocatechuate 3,4-dioxygenase complexed with 2- hydroxyisonicotinic acid n-oxide (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:224/233 of 3pcjM
Sites not aligning to the query:
3pciM Structure of protocatechuate 3,4-dioxygenase complexed with 3-iodo-4- hydroxybenzoate (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:224/233 of 3pciM
3pchM Structure of protocatechuate 3,4-dioxygenase complexed with 3-chloro- 4-hydroxybenzoate (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:224/233 of 3pchM
Sites not aligning to the query:
3pcgM Structure of protocatechuate 3,4-dioxygenase complexed with the inhibitor 4-hydroxyphenylacetate (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:224/233 of 3pcgM
Sites not aligning to the query:
3pcfM Structure of protocatechuate 3,4-dioxygenase complexed with 3-fluro-4- hydroxybenzoate (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:224/233 of 3pcfM
Sites not aligning to the query:
3pceM Structure of protocatechuate 3,4-dioxygenase complexed with 3- hydroxyphenylacetate (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:224/233 of 3pceM
3pcbM Structure of protocatechuate 3,4-dioxygenase complexed with 3- hydroxybenzoate (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:224/233 of 3pcbM
Sites not aligning to the query:
2buqB Crystal structure of wild-type protocatechuate 3,4-dioxygenase from acinetobacter sp. Adp1 in complex with catechol (see paper)
35% identity, 74% coverage: 12:153/193 of query aligns to 29:181/238 of 2buqB
2bumB Crystal structure of wild-type protocatechuate 3,4-dioxygenase from acinetobacter sp. Adp1 (see paper)
35% identity, 74% coverage: 12:153/193 of query aligns to 29:181/238 of 2bumB
1eocB Crystal structure of acinetobacter sp. Adp1 protocatechuate 3,4- dioxygenase in complex with 4-nitrocatechol (see paper)
35% identity, 74% coverage: 12:153/193 of query aligns to 29:181/238 of 1eocB
Sites not aligning to the query:
1eoaB Crystal structure of acinetobacter sp. Adp1 protocatechuate 3,4- dioxygenase in complex with cyanide (see paper)
35% identity, 74% coverage: 12:153/193 of query aligns to 29:181/238 of 1eoaB
1eo9B Crystal structure of acinetobacter sp. Adp1 protocatechuate 3,4- dioxygenase at ph < 7.0 (see paper)
35% identity, 74% coverage: 12:153/193 of query aligns to 29:181/238 of 1eo9B
P00437 Protocatechuate 3,4-dioxygenase beta chain; 3,4-PCD; EC 1.13.11.3 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
35% identity, 94% coverage: 12:192/193 of query aligns to 32:228/239 of P00437
Sites not aligning to the query:
4whrB Anhydride reaction intermediate trapped in protocatechuate 3,4- dioxygenase (pseudomonas putida) at ph 8.5 (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:227/238 of 4whrB
Sites not aligning to the query:
4whqB Alkylperoxo reaction intermediate trapped in protocatechuate 3,4- dioxygenase (pseudomonas putida) at ph 6.5 (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:227/238 of 4whqB
4whqF Alkylperoxo reaction intermediate trapped in protocatechuate 3,4- dioxygenase (pseudomonas putida) at ph 6.5 (see paper)
35% identity, 94% coverage: 12:192/193 of query aligns to 31:227/236 of 4whqF
3lxvM Tyrosine 447 of protocatechuate 3,4-dioxygenase controls efficient progress through catalysis
34% identity, 94% coverage: 12:192/193 of query aligns to 31:227/238 of 3lxvM
Sites not aligning to the query:
3lktM Tyrosine 447 of protocatechuate 3,4-dioxygenase controls efficient progress through catalysis
34% identity, 94% coverage: 12:192/193 of query aligns to 31:227/238 of 3lktM
3mv4M Axial ligand swapping in double mutant maintains intradiol-cleavage chemistry in protocatechuate 3,4-dioxygenase
34% identity, 94% coverage: 12:192/193 of query aligns to 31:227/238 of 3mv4M
>WP_068175025.1 NCBI__GCF_001592305.1:WP_068175025.1
MIATTAAPAWLSPARAQTALRPTPSQTEGPYYPVALPADTDFDLLRNGGARYNEGQAAWV
EGSVTDTRGVPVAGAVVEIWQCDQAGHYHHPGDGGRADPAFQGFGRVSVGRDGRYRFRTL
RPAPYSGRTPHIHVKVKLDRAELLTTQLYVAGDPGNERDFLWRRLGEQGQAALTRPFAAG
ADGLRAEFPIVLG
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Lawrence Berkeley National Laboratory