SitesBLAST
Comparing WP_068747442.1 NCBI__GCF_001601575.1:WP_068747442.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 11 hits to proteins with known functional sites (download)
1b4nA Formaldehyde ferredoxin oxidoreductase from pyrococcus furiosus, complexed with glutarate (see paper)
42% identity, 100% coverage: 1:611/613 of query aligns to 1:604/611 of 1b4nA
- binding calcium ion: G179 (= G180), E304 (≠ Y307), D306 (≠ E312)
- binding glutaric acid: Y307 (= Y313), E308 (= E314), Y416 (= Y429), H437 (= H450), R473 (= R481), R484 (= R491)
- binding tungstopterin cofactor: K75 (= K76), G91 (≠ S92), N92 (= N93), L93 (≠ M94), G94 (= G95), R180 (= R181), A181 (≠ Q182), A182 (= A183), G183 (= G184), R184 (= R185), D306 (≠ E312), E308 (= E314), N309 (≠ T315), D333 (= D339), M337 (≠ I343), D338 (= D344), T339 (= T345), H436 (= H449), H437 (= H450), K438 (≠ N451), F477 (≠ I484), E478 (≠ D485), A482 (≠ V489), C483 (= C490), R484 (= R491), L485 (≠ F492)
- binding iron/sulfur cluster: K75 (= K76), G283 (= G285), C284 (= C286), C287 (= C289), M289 (≠ I291), C291 (= C293), C483 (= C490), L485 (≠ F492)
1b25A Formaldehyde ferredoxin oxidoreductase from pyrococcus furiosus (see paper)
42% identity, 100% coverage: 1:611/613 of query aligns to 1:604/611 of 1b25A
- binding tungstopterin: K75 (= K76), G91 (≠ S92), N92 (= N93), L93 (≠ M94), G94 (= G95), G179 (= G180), R180 (= R181), A181 (≠ Q182), G183 (= G184), R184 (= R185), T240 (= T241), E304 (≠ Y307), D306 (≠ E312), Y307 (= Y313), E308 (= E314), N309 (≠ T315), D333 (= D339), D338 (= D344), T339 (= T345), I340 (= I346), H436 (= H449), H437 (= H450), K438 (≠ N451), E478 (≠ D485), A482 (≠ V489), C483 (= C490), R484 (= R491), L485 (≠ F492)
- binding iron/sulfur cluster: K75 (= K76), R180 (= R181), C284 (= C286), C287 (= C289), M289 (≠ I291), C291 (= C293), C483 (= C490)
1aorA Structure of a hyperthermophilic tungstopterin enzyme, aldehyde ferredoxin oxidoreductase (see paper)
38% identity, 99% coverage: 1:604/613 of query aligns to 1:601/605 of 1aorA
- binding fe (iii) ion: E332 (≠ Y333), H383 (≠ I383)
- binding tungstopterin cofactor: R76 (≠ K76), A92 (≠ S92), N93 (= N93), G95 (= G95), R182 (= R181), A183 (≠ Q182), G185 (= G184), R186 (= R185), E311 (= E312), E313 (= E314), D338 (= D339), D343 (= D344), T344 (= T345), R444 (≠ I446), H448 (= H450), I449 (≠ N451), K450 (≠ R452), D489 (= D485), C494 (= C490), L495 (≠ R491), F496 (= F492)
- binding iron/sulfur cluster: R76 (≠ K76), C288 (= C286), C291 (= C289), I293 (= I291), C295 (= C293), C494 (= C490), F496 (= F492)
Q51739 Tungsten-containing aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; AOR; EC 1.2.7.5 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see paper)
38% identity, 99% coverage: 1:604/613 of query aligns to 1:601/605 of Q51739
- R76 (≠ K76) binding tungstopterin
- N93 (= N93) binding tungstopterin
- G95 (= G95) binding tungstopterin
- R182 (= R181) binding tungstopterin
- A183 (≠ Q182) binding tungstopterin
- G185 (= G184) binding tungstopterin
- R186 (= R185) binding tungstopterin
- C288 (= C286) binding [4Fe-4S] cluster
- C291 (= C289) binding [4Fe-4S] cluster
- C295 (= C293) binding [4Fe-4S] cluster
- D338 (= D339) binding tungstopterin
- L342 (≠ I343) binding tungstopterin
- D343 (= D344) binding tungstopterin
- R444 (≠ I446) binding tungstopterin
- K450 (≠ R452) binding tungstopterin
- D489 (= D485) binding tungstopterin
- L493 (≠ V489) binding tungstopterin
- C494 (= C490) binding [4Fe-4S] cluster
- L495 (≠ R491) binding tungstopterin
8c0zB Cryoem structure of a tungsten-containing aldehyde oxidoreductase from aromatoleum aromaticum (see paper)
33% identity, 98% coverage: 3:605/613 of query aligns to 2:616/616 of 8c0zB
- binding magnesium ion: N92 (= N93), A182 (≠ Q182)
- binding iron/sulfur cluster: R75 (≠ K76), C295 (= C286), C298 (= C289), C302 (= C293), C509 (= C490)
- binding tungsten cofactor: R75 (≠ K76), S91 (= S92), N92 (= N93), G94 (= G95), R181 (= R181), A182 (≠ Q182), A183 (= A183), G184 (= G184), E329 (= E312), E331 (= E314), N356 (≠ D339), P362 (≠ T345), L465 (≠ N451), D504 (= D485), V510 (≠ R491), F511 (= F492)
8c0zA Cryoem structure of a tungsten-containing aldehyde oxidoreductase from aromatoleum aromaticum (see paper)
33% identity, 98% coverage: 3:605/613 of query aligns to 2:616/616 of 8c0zA
- binding iron/sulfur cluster: R181 (= R181), C295 (= C286), C298 (= C289), C302 (= C293), C509 (= C490)
- binding tungsten cofactor: R75 (≠ K76), N92 (= N93), G94 (= G95), R181 (= R181), A183 (= A183), G184 (= G184), R185 (= R185), E329 (= E312), E331 (= E314), N356 (≠ D339), P362 (≠ T345), L465 (≠ N451), D504 (= D485), V510 (≠ R491), F511 (= F492)
6x1oC Wor5 from pyrococcus furiosus, as crystallized (see paper)
31% identity, 99% coverage: 1:604/613 of query aligns to 1:608/624 of 6x1oC
- binding magnesium ion: M194 (≠ G180), D323 (≠ E309), D326 (≠ E312)
- binding phosphate ion: R249 (≠ K234), Y296 (≠ D283)
- binding tungstopterin cofactor: K77 (= K76), S93 (= S92), V94 (≠ N93), L95 (≠ M94), S96 (≠ G95), H195 (≠ R181), A196 (≠ Q182), A197 (= A183), G198 (= G184), Y199 (≠ R185), D326 (≠ E312), E328 (= E314), D353 (= D339), D358 (= D344), G359 (≠ T345), I360 (= I346), H469 (= H450), T470 (≠ N451), Y489 (= Y458), D490 (= D459), I494 (vs. gap), C495 (≠ G463), N496 (≠ R464), F497 (≠ Y465)
- binding iron/sulfur cluster: S96 (≠ G95), D299 (≠ C286), C302 (= C289), C306 (= C293), C495 (≠ G463), F497 (≠ Y465), V498 (≠ E466)
- binding (1R)-1-hydroxybutane-1-sulfonic acid: T253 (= T237), Y327 (= Y313), E328 (= E314), H446 (≠ Y429), H469 (= H450)
E7FHH1 Aliphatic sulfonate oxidoreductase, WOR-like subunit; Aliphatic sulfonate ferredoxin oxidoreductase; ASOR; Tungsten-containing aldehyde oxidoreductase; WOR5; WOR5 large subunit; WOR5-L; EC 1.97.1.13 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see paper)
31% identity, 99% coverage: 1:604/613 of query aligns to 1:608/624 of E7FHH1
- D299 (≠ C286) binding [4Fe-4S] cluster
- C302 (= C289) binding [4Fe-4S] cluster
- C306 (= C293) binding [4Fe-4S] cluster
- C495 (≠ G463) binding [4Fe-4S] cluster
4z3zA Active site complex bambc of benzoyl coenzyme a reductase in complex with zinc (see paper)
29% identity, 99% coverage: 8:611/613 of query aligns to 9:644/652 of 4z3zA
- binding magnesium ion: M94 (≠ N93), S183 (vs. gap)
- binding iron/sulfur cluster: R77 (≠ K76), R181 (= R181), C299 (= C286), C302 (= C289), M304 (≠ I291), C306 (= C293), C534 (= C490)
- binding zinc ion: E251 (≠ Q246), H255 (≠ D250), E257 (≠ G252), H260 (≠ P255)
4z3yA Active site complex bambc of benzoyl coenzyme a reductase in complex with benzoyl-coa (see paper)
29% identity, 99% coverage: 8:611/613 of query aligns to 9:644/653 of 4z3yA
- binding benzoyl coenzyme A: P249 (≠ I244), W259 (≠ F254), F323 (≠ E312), L436 (vs. gap), S439 (vs. gap), M440 (vs. gap), Y445 (vs. gap), T458 (≠ L424), E461 (≠ S427), Q466 (≠ R432), R500 (≠ T457), S504 (≠ A461)
- binding magnesium ion: M94 (≠ N93), S183 (vs. gap)
- binding iron/sulfur cluster: R77 (≠ K76), R181 (= R181), C299 (= C286), C302 (= C289), M304 (≠ I291), K305 (≠ P292), C306 (= C293), C534 (= C490)
4z3wC Active site complex bambc of benzoyl coenzyme a reductase in complex with 1,5 dienoyl-coa (see paper)
29% identity, 99% coverage: 8:611/613 of query aligns to 9:644/653 of 4z3wC
- binding 1,5 Dienoyl-CoA: P249 (≠ I244), W259 (≠ F254), H260 (≠ P255), F323 (≠ E312), L436 (vs. gap), L438 (vs. gap), S439 (vs. gap), M440 (vs. gap), Y445 (vs. gap), T458 (≠ L424), E461 (≠ S427), Q466 (≠ R432), P499 (≠ I456), R500 (≠ T457), S504 (≠ A461)
- binding magnesium ion: M94 (≠ N93), S183 (vs. gap)
- binding iron/sulfur cluster: R77 (≠ K76), R181 (= R181), C299 (= C286), C302 (= C289), M304 (≠ I291), C306 (= C293), C534 (= C490)
Query Sequence
>WP_068747442.1 NCBI__GCF_001601575.1:WP_068747442.1
MYGYNKKLLRVNLTDEKFTVEGIDDSTILNFIGGRGFVAKYLYDEIKKGVNPLSEENKII
IAIGPLSGSFLPSSGKIEFGSKSPLTGGYGDSNMGGHIAAELKLAGYDAVIIEGKCESPK
VLVIENEKIKLIDGTKYWGKGAITCEKMLKEDLGEEYQIATIGPAGENLVKFSCISHDFG
RQAGRTGIAAVMGFKKLKAIAIRGNKTVPVKDPDKLLEKGKEMYNEIYRLPAFKTWTPYG
TADITQWVNDNGAFPTKNFSMGYFEGASKLTGQKLRETIHVLDKGCFSCPIPCGKYSRVR
YSGKEAYVEGPEYETIALIGGNCMIDDIEKVGYINFLMDEYGIDTISGGNVIAFALECFE
KGVINKDDCDGKELKFGDMESVIYLIEKIVKREGIGDVLANGVRNASKTFGKGSENYAIH
VKGLEVSGYEPRNAAGMLLAYMTCDIGAHHNRAWAITYDIAVGRYEVEGKAEKIIELQHI
RPMIDSLNVCRFPWIELGFQLHHYKDVFKYITGIEYEWEDLLRVGEREYNLTRAFNFREI
DDFGRKYDYPPARFYKEELKGEGPTAGQKISFETIEKLLDKYYELRGWDSNGRPTRKKLE
ELNLKYVADELGL
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory