Comparing WP_069333144.1 NCBI__GCF_003046325.1:WP_069333144.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
8wdbD Cryo-em structure of the atp-bound dppabcd complex
46% identity, 79% coverage: 6:267/331 of query aligns to 258:513/513 of 8wdbD
Sites not aligning to the query:
8xfcD Cryo-em structure of the atp-bound mtb dppabcd with the d445a mutation of dppa
46% identity, 79% coverage: 6:267/331 of query aligns to 259:514/517 of 8xfcD
Sites not aligning to the query:
8j5qD Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- translocation state (see paper)
45% identity, 72% coverage: 38:275/331 of query aligns to 373:611/611 of 8j5qD
Sites not aligning to the query:
8j5tD Cryo-em structure of mycobacterium tuberculosis oppabcd in the catalytic intermediate state (see paper)
45% identity, 70% coverage: 38:268/331 of query aligns to 373:604/608 of 8j5tD
Sites not aligning to the query:
8j5sD Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- catalytic intermediate state (see paper)
45% identity, 70% coverage: 38:268/331 of query aligns to 373:604/608 of 8j5sD
Sites not aligning to the query:
Q8RDH4 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis) (see paper)
36% identity, 88% coverage: 38:329/331 of query aligns to 21:321/326 of Q8RDH4
4fwiB Crystal structure of the nucleotide-binding domain of a dipeptide abc transporter (see paper)
36% identity, 88% coverage: 38:329/331 of query aligns to 20:310/310 of 4fwiB
Sites not aligning to the query:
P0AAH4 Putrescine export system ATP-binding protein SapD from Escherichia coli (strain K12) (see paper)
34% identity, 82% coverage: 38:307/331 of query aligns to 20:306/330 of P0AAH4
7z18I E. Coli c-p lyase bound to a phnk abc dimer and atp (see paper)
38% identity, 67% coverage: 44:264/331 of query aligns to 22:245/250 of 7z18I
Sites not aligning to the query:
7z15I E. Coli c-p lyase bound to a phnk/phnl dual abc dimer and adp + pi (see paper)
38% identity, 67% coverage: 44:264/331 of query aligns to 22:245/253 of 7z15I
Sites not aligning to the query:
7z16I E. Coli c-p lyase bound to phnk/phnl dual abc dimer with amppnp and phnk e171q mutation (see paper)
37% identity, 67% coverage: 44:264/331 of query aligns to 22:245/250 of 7z16I
Sites not aligning to the query:
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
35% identity, 71% coverage: 29:263/331 of query aligns to 9:241/343 of P30750
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
35% identity, 71% coverage: 29:263/331 of query aligns to 10:242/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
35% identity, 71% coverage: 29:263/331 of query aligns to 10:242/344 of 3tuiC
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
35% identity, 71% coverage: 29:263/331 of query aligns to 10:242/344 of 6cvlD
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
36% identity, 66% coverage: 44:263/331 of query aligns to 21:236/241 of 4u00A
Sites not aligning to the query:
3c4jA Abc protein artp in complex with atp-gamma-s
33% identity, 67% coverage: 44:264/331 of query aligns to 22:239/242 of 3c4jA
Sites not aligning to the query:
3c41J Abc protein artp in complex with amp-pnp/mg2+
33% identity, 67% coverage: 44:264/331 of query aligns to 22:239/242 of 3c41J