SitesBLAST
Comparing WP_072908806.1 NCBI__GCF_900142125.1:WP_072908806.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
1snyA Carbonyl reductase sniffer of d. Melanogaster (see paper)
32% identity, 100% coverage: 1:220/220 of query aligns to 2:248/248 of 1snyA
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G9 (= G8), N11 (= N10), R12 (= R11), G13 (= G12), L14 (≠ I13), R37 (= R33), L62 (≠ V52), N90 (= N76), A91 (= A77), G92 (= G78), I93 (≠ L79), M152 (≠ I124), S153 (≠ T125), S154 (= S126), Y170 (= Y142), K174 (= K146), H199 (= H171), P200 (= P172), W202 (≠ Y174), V203 (= V175), T205 (= T177), M207 (= M179), G208 (≠ V180)
3wxbA Crystal structure of NADPH bound carbonyl reductase from chicken fatty liver (see paper)
34% identity, 100% coverage: 1:220/220 of query aligns to 16:269/269 of 3wxbA
- binding 1,2-ethanediol: S169 (= S126), Y188 (= Y142)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G23 (= G8), N25 (= N10), R26 (= R11), G27 (= G12), I28 (= I13), R51 (= R33), R57 (≠ S35), E77 (≠ D51), V78 (= V52), N106 (= N76), G108 (= G78), I109 (≠ L79), I167 (= I124), S169 (= S126), Y188 (= Y142), K192 (= K146), P218 (= P172), G219 (= G173), W220 (≠ Y174), V221 (= V175), T223 (= T177), M225 (≠ F182)
5uzxA Crystal structure of putative short-chain dehydrogenase/reductase from burkholderia multivorans with bound NADP
33% identity, 89% coverage: 4:199/220 of query aligns to 5:210/231 of 5uzxA
- binding nadp nicotinamide-adenine-dinucleotide phosphate: S11 (≠ N10), R12 (= R11), G13 (= G12), L14 (≠ I13), R34 (= R33), D59 (= D51), I60 (≠ V52), N84 (= N76), A85 (= A77), G86 (= G78), M135 (≠ I124), S137 (= S126), Y153 (= Y142), K157 (= K146), P183 (= P172), G184 (= G173), W185 (≠ Y174), V186 (= V175), T188 (= T177), L190 (≠ M179)
5idwA Crystal structure of an oxidoreductase from burkholderia vietnamiensis in complex with NADP
33% identity, 100% coverage: 1:220/220 of query aligns to 1:225/225 of 5idwA
- binding nadp nicotinamide-adenine-dinucleotide phosphate: S10 (≠ N10), R11 (= R11), G12 (= G12), L13 (≠ I13), R33 (= R33), D52 (= D51), V77 (≠ N76), S78 (≠ A77), G79 (= G78), V80 (≠ L79), T102 (≠ I99), S129 (≠ T125), S130 (= S126), Y146 (= Y142), K150 (= K146), P174 (= P172), G175 (= G173), W176 (≠ Y174), V177 (= V175), T179 (= T177), M181 (= M179)
5wqpA Crystal structure of a carbonyl reductase from pseudomonas aeruginosa pao1 in complex with NADP (condition ii) (see paper)
31% identity, 100% coverage: 1:220/220 of query aligns to 2:230/230 of 5wqpA
- binding nadp nicotinamide-adenine-dinucleotide phosphate: S11 (≠ N10), R12 (= R11), I14 (= I13), R34 (= R33), D59 (= D51), L60 (≠ V52), N84 (= N76), A85 (= A77), G86 (= G78), M134 (≠ I124), Y152 (= Y142), K156 (= K146), P182 (= P172), W184 (≠ Y174), V185 (= V175), T187 (= T177), M189 (= M179)
- binding nicotinamide: S136 (= S126), Q137 (≠ R127), M149 (≠ R139), Y152 (= Y142), H181 (= H171), W184 (≠ Y174)
5wqoA Crystal structure of a carbonyl reductase from pseudomonas aeruginosa pao1 in complex with NADP (condition i) (see paper)
31% identity, 100% coverage: 1:220/220 of query aligns to 6:234/234 of 5wqoA
- binding nadp nicotinamide-adenine-dinucleotide phosphate: S15 (≠ N10), R16 (= R11), G17 (= G12), I18 (= I13), R38 (= R33), D63 (= D51), L64 (≠ V52), N88 (= N76), A89 (= A77), M138 (≠ I124), Y156 (= Y142), K160 (= K146), P186 (= P172), W188 (≠ Y174), V189 (= V175), T191 (= T177), M193 (= M179)
7xwiB Structure of patulin-detoxifying enzyme with NADPH (see paper)
33% identity, 98% coverage: 6:220/220 of query aligns to 7:224/224 of 7xwiB
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G9 (= G8), N11 (= N10), R12 (= R11), G13 (= G12), I14 (= I13), R35 (= R33), D59 (= D51), I60 (≠ V52), N86 (= N76), A87 (= A77), A88 (≠ G78), I137 (= I124), S139 (= S126), Y155 (= Y142), K159 (= K146), H184 (= H171), P185 (= P172), G186 (= G173), V187 (≠ Y174), V188 (= V175)
7xwhA Structure of patulin-detoxifying enzyme with NADP+ (see paper)
32% identity, 98% coverage: 6:220/220 of query aligns to 7:223/223 of 7xwhA
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G9 (= G8), N11 (= N10), R12 (= R11), G13 (= G12), I14 (= I13), R35 (= R33), D59 (= D51), I60 (≠ V52), N86 (= N76), A87 (= A77), A88 (≠ G78), I137 (= I124), S139 (= S126), Y155 (= Y142), K159 (= K146), P185 (= P172), G186 (= G173), V187 (≠ Y174), V188 (= V175)
7xwkA Structure of patulin-detoxifying enzyme y155f with NADPH and substrate (see paper)
32% identity, 98% coverage: 6:220/220 of query aligns to 7:223/223 of 7xwkA
- binding (4~{S})-4-oxidanyl-4,6-dihydrofuro[3,2-c]pyran-2-one: S61 (≠ T53), F109 (≠ E98)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G9 (= G8), N11 (= N10), R12 (= R11), G13 (= G12), I14 (= I13), R35 (= R33), D59 (= D51), I60 (≠ V52), N86 (= N76), A87 (= A77), A88 (≠ G78), I137 (= I124), S139 (= S126), F155 (≠ Y142), K159 (= K146), G186 (= G173), V187 (≠ Y174), V188 (= V175)
5vp5A Crystal structure of a 3-oxoacyl-acyl-carrier protein reductase fabg4 from mycobacterium smegmatis bound to NAD (see paper)
31% identity, 82% coverage: 2:181/220 of query aligns to 185:370/411 of 5vp5A
- active site: S318 (= S126), Y331 (= Y142), K335 (= K146)
- binding nicotinamide-adenine-dinucleotide: G191 (= G8), R194 (= R11), I196 (= I13), D215 (≠ C32), V216 (≠ R33), D238 (= D51), V239 (= V52), N266 (= N76), A267 (= A77), I269 (≠ L79), S318 (= S126), Y331 (= Y142), K335 (= K146), P361 (= P172)
3v1uA Crystal structure of a beta-ketoacyl reductase fabg4 from mycobacterium tuberculosis h37rv complexed with NAD+ and hexanoyl-coa at 2.5 angstrom resolution (see paper)
32% identity, 82% coverage: 2:182/220 of query aligns to 179:365/416 of 3v1uA
- active site: S312 (= S126), Y325 (= Y142), K329 (= K146)
- binding hexanoyl-coenzyme a: G262 (= G78), K267 (≠ E83), L268 (≠ V84), N271 (≠ S87), N319 (= N134)
- binding nicotinamide-adenine-dinucleotide: G185 (= G8), R188 (= R11), G189 (= G12), I190 (= I13), D209 (≠ C32), V210 (≠ R33), D232 (= D51), V233 (= V52), N260 (= N76), A261 (= A77), I263 (≠ L79), V283 (≠ I99), S312 (= S126), Y325 (= Y142), K329 (= K146), P355 (= P172), G356 (= G173), Q361 (≠ R178)
I6Y778 3-oxoacyl-[acyl-carrier-protein] reductase [NADH]; Beta-ketoacyl CoA reductase; FASII-like 3-oxoacyl-thioester reductase; HMwFabG; EC 1.1.1.212 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
32% identity, 81% coverage: 2:180/220 of query aligns to 214:398/454 of I6Y778
- RGI 223:225 (= RGI 11:13) binding NAD(+)
- D244 (≠ C32) binding NAD(+)
- DV 267:268 (= DV 51:52) binding NAD(+)
- NAG 295:297 (= NAG 76:78) binding NAD(+)
- KLLAN 302:306 (≠ EVLGS 83:87) binding substrate
- N354 (= N134) binding substrate
- Y360 (= Y142) binding NAD(+)
- K364 (= K146) binding NAD(+)
- T395 (= T177) binding NAD(+)
Sites not aligning to the query:
- 146 R→A: 2.2-fold decrease in catalytic efficiency with NADH as substrate. 26-fold decrease in catalytic efficiency; when associated with A-445.
- 445 R→A: 12-fold decrease in catalytic efficiency with NADH as substrate. 26-fold decrease in catalytic efficiency; when associated with A-146.
- 449:454 mutation Missing: Drastic reduction of ketoreductase activity.
4fw8A Crystal structure of fabg4 complexed with coenzyme nadh (see paper)
32% identity, 81% coverage: 2:180/220 of query aligns to 187:371/427 of 4fw8A
- active site: S320 (= S126), Y333 (= Y142), K337 (= K146)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G193 (= G8), R196 (= R11), I198 (= I13), D217 (≠ C32), L239 (≠ I50), V241 (= V52), N268 (= N76), A269 (= A77), G270 (= G78), L318 (≠ I124), Y333 (= Y142), K337 (= K146), P363 (= P172)
3q6iA Crystal structure of fabg4 and coenzyme binary complex
32% identity, 81% coverage: 2:180/220 of query aligns to 187:371/427 of 3q6iA
- active site: S320 (= S126), Y333 (= Y142), K337 (= K146)
- binding nicotinamide-adenine-dinucleotide: G193 (= G8), I198 (= I13), D217 (≠ C32), L239 (≠ I50), D240 (= D51), V241 (= V52), N268 (= N76), A269 (= A77), G270 (= G78), L318 (≠ I124), Y333 (= Y142), K337 (= K146), P363 (= P172), T368 (= T177)
7emgB Carbonyl reductase variant 4 (r123c/l209p/f183y/v61k) from serratia marcescens complexed with NADP+ (see paper)
34% identity, 81% coverage: 2:179/220 of query aligns to 5:187/243 of 7emgB
4nbuB Crystal structure of fabg from bacillus sp (see paper)
32% identity, 81% coverage: 2:180/220 of query aligns to 8:190/244 of 4nbuB
- active site: G18 (= G12), N111 (= N100), S139 (= S126), Q149 (≠ R139), Y152 (= Y142), K156 (= K146)
- binding acetoacetyl-coenzyme a: D93 (= D82), K98 (≠ S87), S139 (= S126), N146 (≠ D133), V147 (≠ N134), Q149 (≠ R139), Y152 (= Y142), F184 (≠ Y174), M189 (= M179)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G14 (= G8), N17 (≠ R11), G18 (= G12), I19 (= I13), D38 (≠ C32), F39 (≠ R33), V59 (≠ I50), D60 (= D51), V61 (= V52), N87 (= N76), A88 (= A77), G89 (= G78), I90 (≠ L79), T137 (≠ I124), S139 (= S126), Y152 (= Y142), K156 (= K146), P182 (= P172), F184 (≠ Y174), T185 (≠ V175), T187 (= T177), M189 (= M179)
Sites not aligning to the query:
4i08A Crystal structure of beta-ketoacyl-acyl carrier protein reductase (fabg) from vibrio cholerae in complex with NADPH (see paper)
28% identity, 82% coverage: 2:181/220 of query aligns to 9:193/243 of 4i08A
- active site: G19 (= G12), N113 (= N100), S141 (= S126), Q151 (≠ R139), Y154 (= Y142), K158 (= K146)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G15 (= G8), S17 (≠ N10), R18 (= R11), I20 (= I13), T40 (≠ R33), N62 (≠ D51), V63 (= V52), N89 (= N76), A90 (= A77), G140 (≠ T125), S141 (= S126), Y154 (= Y142), K158 (= K146), P184 (= P172), G185 (= G173), T189 (= T177)
5el0A Crystal structure of an oxidoreductase (short chain dehydrogenase/reductase family) from brucella ovis in complex with a partially ordered NAD
30% identity, 97% coverage: 2:214/220 of query aligns to 3:223/223 of 5el0A
- active site: G13 (= G12), S142 (= S126), A152 (≠ S136), Y156 (= Y142), K160 (= K146)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G9 (= G8), S11 (≠ N10), S33 (≠ C32), R34 (= R33), V53 (≠ I50), D54 (= D51), L55 (≠ V52), G87 (= G78), I88 (≠ L79), A192 (≠ R178), L194 (= L185)
3op4A Crystal structure of putative 3-ketoacyl-(acyl-carrier-protein) reductase from vibrio cholerae o1 biovar eltor str. N16961 in complex with NADP+ (see paper)
28% identity, 81% coverage: 2:179/220 of query aligns to 9:191/247 of 3op4A
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G15 (= G8), S17 (≠ N10), R18 (= R11), I20 (= I13), T40 (≠ R33), N62 (≠ D51), V63 (= V52), N89 (= N76), A90 (= A77), I92 (≠ L79), V139 (≠ I124), S141 (= S126), Y154 (= Y142), K158 (= K146), P184 (= P172), G185 (= G173), I187 (≠ V175), T189 (= T177), M191 (= M179)
6t77A Crystal structure of klebsiella pneumoniae fabg(NADPH-dependent) NADP- complex at 1.75 a resolution (see paper)
33% identity, 81% coverage: 2:179/220 of query aligns to 6:188/244 of 6t77A
- active site: G16 (= G12), S138 (= S126), Y151 (= Y142)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G12 (= G8), S14 (≠ N10), R15 (= R11), T37 (≠ R33), L58 (≠ S48), N59 (= N49), V60 (≠ I50), A87 (= A77), G88 (= G78), I89 (≠ L79)
Query Sequence
>WP_072908806.1 NCBI__GCF_900142125.1:WP_072908806.1
MKHVVITGANRGIGLELAQHYHAEKWKVTGVCRESSAELDAAAEQVISNIDVTSKEDVDK
LVASLSGQSIDLLINNAGLLQDEVLGSIDYDSIRLQMEINAYAPLRISEALLPNLQAGSK
IANITSRMGSIADNDSGGRYGYRASKAALNAFGKSLAVDLQPRGIAVAQLHPGYVKTRMV
DFGGLITTKESVEGLIKLIDNLNLENSGSFWHSNGEELPW
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory