Comparing WP_073037840.1 NCBI__GCF_900129305.1:WP_073037840.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3c4jA Abc protein artp in complex with atp-gamma-s
67% identity, 99% coverage: 1:240/242 of query aligns to 3:242/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
67% identity, 99% coverage: 1:240/242 of query aligns to 3:242/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
67% identity, 99% coverage: 1:240/242 of query aligns to 3:242/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
67% identity, 99% coverage: 1:240/242 of query aligns to 3:242/242 of 2oljA
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
65% identity, 99% coverage: 1:240/242 of query aligns to 1:240/240 of 4ymuJ
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
65% identity, 99% coverage: 1:240/242 of query aligns to 2:240/241 of 4u00A
P02915 Histidine/lysine/arginine/ornithine transport ATP-binding protein HisP; EC 7.4.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
57% identity, 97% coverage: 2:236/242 of query aligns to 7:253/258 of P02915
1b0uA Atp-binding subunit of the histidine permease from salmonella typhimurium (see paper)
57% identity, 97% coverage: 2:236/242 of query aligns to 3:249/258 of 1b0uA
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
43% identity, 99% coverage: 1:240/242 of query aligns to 1:245/343 of P30750
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
42% identity, 99% coverage: 1:240/242 of query aligns to 2:246/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
42% identity, 99% coverage: 1:240/242 of query aligns to 2:246/344 of 3tuiC
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
42% identity, 99% coverage: 1:240/242 of query aligns to 2:246/344 of 6cvlD
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
42% identity, 99% coverage: 1:239/242 of query aligns to 17:251/378 of P69874
Sites not aligning to the query:
2d62A Crystal structure of multiple sugar binding transport atp- binding protein
38% identity, 98% coverage: 2:237/242 of query aligns to 7:244/375 of 2d62A
1g291 Malk (see paper)
37% identity, 98% coverage: 2:237/242 of query aligns to 4:241/372 of 1g291
Sites not aligning to the query:
7ahhC Opua inhibited inward-facing, sbd docked (see paper)
38% identity, 94% coverage: 9:236/242 of query aligns to 34:263/382 of 7ahhC
Sites not aligning to the query:
7aheC Opua inhibited inward facing (see paper)
38% identity, 94% coverage: 9:236/242 of query aligns to 34:263/382 of 7aheC
Sites not aligning to the query:
1f3oA Crystal structure of mj0796 atp-binding cassette (see paper)
43% identity, 90% coverage: 1:217/242 of query aligns to 1:226/232 of 1f3oA
7ahdC Opua (e190q) occluded (see paper)
38% identity, 93% coverage: 9:233/242 of query aligns to 34:260/260 of 7ahdC
Sites not aligning to the query:
1l2tA Dimeric structure of mj0796, a bacterial abc transporter cassette (see paper)
43% identity, 90% coverage: 1:217/242 of query aligns to 1:226/230 of 1l2tA
>WP_073037840.1 NCBI__GCF_900129305.1:WP_073037840.1
MIRIENLHKSFGSLEVIKGIDLHVRPGEVVCIIGPSGSGKSTVLRCINRLEQPTSGRIVV
DGKDITDPKTNMNLVRAEATMVFQQFNLFPHMTVLHNVTLGPVKVRGLSKAEAEKRGMEL
LAKVGLAEKAHNYPDQLSGGQKQRVAIARALALQPKVILFDEPTSALDPELVGEVLEVMK
QLAREGMTMVVVTHEMGFAKEVADRVIFIDGGRIQEEGPPEEFFSNPKNPRLRDFLGKVI
AH
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory