SitesBLAST
Comparing WP_074201862.1 NCBI__GCF_900141795.1:WP_074201862.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7do7A Crystal structure of azotobacter vinelandii l-rhamnose 1- dehydrogenase(NAD and l-rhamnose bound-form) (see paper)
36% identity, 92% coverage: 8:254/269 of query aligns to 3:251/256 of 7do7A
- active site: G16 (= G21), S146 (= S149), Y159 (= Y162)
- binding nicotinamide-adenine-dinucleotide: G12 (= G17), R15 (≠ S20), G16 (= G21), I17 (= I22), S37 (≠ N42), D66 (= D68), A67 (≠ F69), N93 (= N95), A94 (= A96), G95 (= G97), I96 (= I98), V144 (≠ N147), S145 (= S148), S146 (= S149), Y159 (= Y162), K163 (= K166), P189 (= P192), G190 (= G193), I192 (≠ V195), T194 (≠ V197), I196 (≠ R199)
- binding beta-L-rhamnopyranose: F99 (≠ K101), S146 (= S149), S148 (≠ H151), Q156 (≠ F159), Y159 (= Y162), N197 (≠ T200), D235 (= D238), M236 (≠ R239), R238 (≠ A241)
7b81A Crystal structure of azotobacter vinelandii l-rhamnose 1-dehydrogenase (NAD bound-form) (see paper)
36% identity, 92% coverage: 8:254/269 of query aligns to 3:251/256 of 7b81A
- active site: G16 (= G21), S146 (= S149), Y159 (= Y162)
- binding nicotinamide-adenine-dinucleotide: G12 (= G17), S14 (= S19), R15 (≠ S20), I17 (= I22), D66 (= D68), A67 (≠ F69), N93 (= N95), A94 (= A96), G95 (= G97), I96 (= I98), T116 (≠ V119), V144 (≠ N147), S146 (= S149), Y159 (= Y162), K163 (= K166), P189 (= P192), G190 (= G193), I192 (≠ V195), T194 (≠ V197), I196 (≠ R199)
C1DMX5 L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii (strain DJ / ATCC BAA-1303) (see paper)
36% identity, 92% coverage: 8:254/269 of query aligns to 3:251/256 of C1DMX5
- G12 (= G17) binding NADP(+)
- S14 (= S19) binding NADP(+)
- R15 (≠ S20) binding NADP(+); mutation to T: Increases specificity toward NAD(+). Shows a strong decrease in catalytic efficiency with NADP(+).
- I17 (= I22) binding NADP(+)
- S37 (≠ N42) binding NADP(+); mutation to H: Increases specificity toward NAD(+). Shows a strong decrease in catalytic efficiency with NADP(+) and an increase in catalytic efficiency with NAD(+).
- D66 (= D68) binding NADP(+)
- A67 (≠ F69) binding NADP(+)
- N93 (= N95) binding NADP(+)
- F99 (≠ K101) mutation F->A,Y: Shows a strong decrease in catalytic efficiency with L-rhamnose, L-lyxose and L-mannose.
- S146 (= S149) binding beta-L-rhamnose
- S148 (≠ H151) binding beta-L-rhamnose
- Q156 (≠ F159) binding beta-L-rhamnose; mutation to A: Almost loss of activity with L-rhamnose as substrate.
- Y159 (= Y162) binding beta-L-rhamnose; binding NADP(+)
- K163 (= K166) binding NADP(+)
- T191 (≠ V194) binding beta-L-rhamnose; mutation to F: Retains 4% of wild-type activity with L-rhamnose as substrate.
- I192 (≠ V195) binding NADP(+)
- I196 (≠ R199) mutation to A: Shows a strong decrease in catalytic efficiency with L-rhamnose as substrate, but does not affect catalytic efficiency with L-lyxose and L-mannose.
- N197 (≠ T200) binding beta-L-rhamnose
- D200 (≠ I203) mutation to A: Retains 16% of wild-type activity with L-rhamnose as substrate.; mutation to H: Retains 22% of wild-type activity with L-rhamnose as substrate.
4jroC Crystal structure of 3-oxoacyl-[acyl-carrier protein]reductase (fabg) from listeria monocytogenes in complex with NADP+
33% identity, 92% coverage: 8:255/269 of query aligns to 3:246/247 of 4jroC
- active site: G16 (= G21), S142 (= S149), Q152 (≠ F159), Y155 (= Y162), K159 (= K166)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G12 (= G17), S14 (= S19), R15 (≠ S20), G16 (= G21), I17 (= I22), N35 (≠ H40), Y36 (= Y41), N37 (= N42), G38 (≠ R43), S39 (≠ N44), N63 (≠ D68), V64 (≠ F69), N90 (= N95), A91 (= A96), I93 (= I98), I113 (≠ V119), S142 (= S149), Y155 (= Y162), K159 (= K166), P185 (= P192), I188 (≠ V195), T190 (≠ V197)
1vl8B Crystal structure of gluconate 5-dehydrogenase (tm0441) from thermotoga maritima at 2.07 a resolution
33% identity, 93% coverage: 7:256/269 of query aligns to 3:251/252 of 1vl8B
- active site: G17 (= G21), S143 (= S148), I154 (≠ F159), Y157 (= Y162), K161 (= K166)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G13 (= G17), R16 (≠ S20), G17 (= G21), L18 (≠ I22), S37 (≠ Y41), R38 (≠ N42), C63 (= C67), D64 (= D68), V65 (≠ F69), A91 (≠ N95), A92 (= A96), G93 (= G97), I94 (= I98), V114 (= V119), I141 (≠ N146), S143 (= S148), Y157 (= Y162), K161 (= K166), P187 (= P192), G188 (= G193), Y190 (≠ V195), T192 (≠ V197), M194 (≠ R199), T195 (= T200)
8w0oA Gdh-105 crystal structure
31% identity, 93% coverage: 4:254/269 of query aligns to 1:250/259 of 8w0oA
- binding nicotinamide-adenine-dinucleotide: G14 (= G17), S17 (= S20), G18 (= G21), L19 (≠ I22), Y39 (≠ N42), Q43 (≠ A46), D65 (= D68), V66 (≠ F69), N92 (= N95), A93 (= A96), G94 (= G97), M143 (≠ N147), Y158 (= Y162), K162 (= K166), P188 (= P192), G189 (= G193), I191 (≠ V195), T193 (≠ V197)
7do6A Crystal structure of azotobacter vinelandii l-rhamnose 1- dehydrogenase(NADP bound-form) (see paper)
35% identity, 92% coverage: 8:254/269 of query aligns to 3:242/247 of 7do6A
- active site: G16 (= G21), S146 (= S149), Y159 (= Y162)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G12 (= G17), S14 (= S19), R15 (≠ S20), G16 (= G21), I17 (= I22), H36 (≠ Y41), S37 (≠ N42), G42 (= G47), D66 (= D68), A67 (≠ F69), N93 (= N95), A94 (= A96), G95 (= G97), I96 (= I98), T116 (≠ V119), S146 (= S149), Y159 (= Y162), K163 (= K166), I192 (≠ V195)
1g6kA Crystal structure of glucose dehydrogenase mutant e96a complexed with NAD+
29% identity, 96% coverage: 4:261/269 of query aligns to 1:254/261 of 1g6kA
- active site: G18 (= G21), S145 (= S149), Y158 (= Y162), K162 (= K166)
- binding nicotinamide-adenine-dinucleotide: T17 (≠ S20), G18 (= G21), L19 (≠ I22), R39 (≠ N42), D65 (= D68), V66 (≠ F69), N92 (= N95), A93 (= A96), G94 (= G97), M143 (≠ N147), S145 (= S149), Y158 (= Y162), P188 (= P192), G189 (= G193), I191 (≠ V195), T193 (≠ V197)
3ay6B Crystal structure of bacillus megaterium glucose dehydrogenase 4 a258f mutant in complex with nadh and d-glucose (see paper)
29% identity, 96% coverage: 4:262/269 of query aligns to 7:264/267 of 3ay6B
- active site: G24 (= G21), S151 (= S149), Y164 (= Y162), K168 (= K166)
- binding beta-D-glucopyranose: E102 (≠ V99), S151 (= S149), H153 (= H151), W158 (≠ C156), Y164 (= Y162), N202 (≠ T200), K205 (≠ I203)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G20 (= G17), T23 (≠ S20), G24 (= G21), L25 (≠ I22), Y45 (≠ N42), D71 (= D68), V72 (≠ F69), N98 (= N95), A99 (= A96), G100 (= G97), V101 (≠ I98), M149 (≠ N147), S151 (= S149), Y164 (= Y162), K168 (= K166), P194 (= P192), G195 (= G193), M197 (≠ V195), T199 (≠ V197), P200 (≠ E198), I201 (≠ R199), N202 (≠ T200)
P40288 Glucose 1-dehydrogenase; EC 1.1.1.47 from Priestia megaterium (Bacillus megaterium) (see 2 papers)
29% identity, 96% coverage: 4:261/269 of query aligns to 1:254/261 of P40288
- 11:35 (vs. 14:38, 40% identical) binding NADP(+)
- E96 (≠ V99) mutation E->A,G,K: Heat stable.
- D108 (≠ E111) mutation to N: Heat stable.
- V112 (= V116) mutation to A: Heat stable.
- E133 (= E137) mutation to K: Heat stable.
- V183 (≠ L187) mutation to I: Heat stable.
- P194 (≠ E198) mutation to Q: Heat stable.
- E210 (≠ M214) mutation to K: Heat stable.
- Y217 (≠ R221) mutation to H: Heat stable.
- Q252 (≠ N259) mutation to L: Heat stable.
- Y253 (= Y260) mutation to C: Heat stable.
Sites not aligning to the query:
- 258 A→G: Heat stable.
4hp8B Crystal structure of a putative 2-deoxy-d-gluconate 3-dehydrogenase from agrobacterium tumefaciens (target efi-506435) with bound NADP
34% identity, 93% coverage: 7:257/269 of query aligns to 5:246/246 of 4hp8B
- active site: G19 (= G21), S138 (= S149), V148 (≠ F159), Y151 (= Y162), K155 (= K166)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G15 (= G17), N17 (≠ S19), T18 (≠ S20), G19 (= G21), L20 (≠ I22), R40 (≠ N42), R41 (= R43), D63 (= D68), F64 (= F69), N85 (= N95), G87 (= G97), I88 (= I98), I136 (≠ N147), Y151 (= Y162), K155 (= K166), P181 (= P192), G182 (= G193), I184 (≠ V195), T186 (≠ V197), N188 (≠ R199), T189 (= T200)
2ae2A Tropinone reductase-ii complexed with NADP+ and pseudotropine (see paper)
33% identity, 92% coverage: 14:260/269 of query aligns to 12:259/259 of 2ae2A
- active site: G19 (= G21), S145 (= S149), Y158 (= Y162), K162 (= K166)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G15 (= G17), S17 (= S19), R18 (≠ S20), G19 (= G21), I20 (= I22), S39 (≠ N42), R40 (= R43), C64 (= C67), L66 (≠ F69), N93 (= N95), G95 (= G97), I116 (≠ V119), I143 (≠ N147), S145 (= S149), Y158 (= Y162), K162 (= K166), P188 (= P192), G189 (= G193), V190 (= V194), I191 (≠ V195), T193 (≠ V197), S194 (≠ E198), L195 (≠ R199), V196 (≠ T200)
- binding pseudotropine: S145 (= S149), E155 (≠ F159), Y158 (= Y162), L195 (≠ R199)
1ipfA Tropinone reductase-ii complexed with NADPH and tropinone (see paper)
33% identity, 92% coverage: 14:260/269 of query aligns to 12:259/259 of 1ipfA
- active site: G19 (= G21), S145 (= S149), Y158 (= Y162), K162 (= K166)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G15 (= G17), R18 (≠ S20), G19 (= G21), I20 (= I22), S39 (≠ N42), R40 (= R43), C64 (= C67), D65 (= D68), L66 (≠ F69), N93 (= N95), S145 (= S149), Y158 (= Y162), K162 (= K166), P188 (= P192), V190 (= V194), I191 (≠ V195), T193 (≠ V197), S194 (≠ E198), L195 (≠ R199), V196 (≠ T200)
- binding 8-methyl-8-azabicyclo[3,2,1]octan-3-one: S147 (≠ H151), E155 (≠ F159), Y158 (= Y162)
1ipeA Tropinone reductase-ii complexed with NADPH (see paper)
33% identity, 92% coverage: 14:260/269 of query aligns to 12:259/259 of 1ipeA
- active site: G19 (= G21), S145 (= S149), Y158 (= Y162), K162 (= K166)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G15 (= G17), S17 (= S19), R18 (≠ S20), G19 (= G21), I20 (= I22), S39 (≠ N42), R40 (= R43), C64 (= C67), D65 (= D68), L66 (≠ F69), N93 (= N95), I116 (≠ V119), S145 (= S149), Y158 (= Y162), K162 (= K166), P188 (= P192), I191 (≠ V195), T193 (≠ V197), S194 (≠ E198), L195 (≠ R199), V196 (≠ T200)
P50163 Tropinone reductase 2; Tropinone reductase II; TR-II; EC 1.1.1.236 from Datura stramonium (Jimsonweed) (Common thornapple) (see paper)
33% identity, 92% coverage: 14:260/269 of query aligns to 13:260/260 of P50163
- 18:41 (vs. 19:43, 44% identical) binding NADP(+)
- S146 (= S149) binding substrate
- IATSL 192:196 (≠ VPVER 195:199) binding NADP(+)
7caxD Crystal structure of bacterial reductase
32% identity, 91% coverage: 10:255/269 of query aligns to 1:238/238 of 7caxD
- active site: G12 (= G21), S139 (= S149), Y152 (= Y162)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G8 (= G17), S10 (= S19), R11 (≠ S20), I13 (= I22), H31 (= H40), R33 (≠ N42), S34 (≠ R43), R35 (≠ N44), D59 (= D68), V60 (≠ F69), N86 (= N95), A87 (= A96), G88 (= G97), S139 (= S149), Y152 (= Y162), K156 (= K166), P182 (= P192), G183 (= G193), I185 (≠ V195)
6ixmC Crystal structure of the ketone reductase chkred20 from the genome of chryseobacterium sp. Ca49 complexed with NAD (see paper)
32% identity, 93% coverage: 8:256/269 of query aligns to 3:247/248 of 6ixmC
- active site: G16 (= G21), S142 (= S149), Y155 (= Y162), K159 (= K166)
- binding nicotinamide-adenine-dinucleotide: G12 (= G17), S15 (= S20), G16 (= G21), I17 (= I22), D36 (≠ N42), I37 (≠ R43), A61 (≠ C67), D62 (= D68), T63 (≠ F69), N89 (= N95), A90 (= A96), M140 (≠ N147), S142 (= S149), Y155 (= Y162), K159 (= K166), P185 (= P192), A186 (≠ G193), Y187 (≠ V194), I188 (≠ V195), L192 (≠ R199)
4urfB Molecular genetic and crystal structural analysis of 1-(4- hydroxyphenyl)-ethanol dehydrogenase from aromatoleum aromaticum ebn1 (see paper)
35% identity, 93% coverage: 8:257/269 of query aligns to 3:248/248 of 4urfB
- active site: G16 (= G21), S142 (= S149), I152 (≠ F159), Y155 (= Y162), K159 (= K166)
- binding 3-pyridinium-1-ylpropane-1-sulfonate: L210 (= L219), R211 (≠ G220), R212 (= R221)
- binding bicarbonate ion: I92 (= I98), G94 (≠ S100), R109 (≠ E115), R179 (= R186), S228 (= S237)
- binding nicotinamide-adenine-dinucleotide: G12 (= G17), G14 (≠ S19), N15 (≠ S20), G16 (= G21), I17 (= I22), D36 (≠ Y41), I37 (≠ N42), D62 (= D68), T63 (≠ F69), N89 (= N95), A90 (= A96), G91 (= G97), I140 (≠ N147), Y155 (= Y162), K159 (= K166), P185 (= P192), A186 (≠ G193), I188 (≠ V195), T190 (= T200)
4urfA Molecular genetic and crystal structural analysis of 1-(4- hydroxyphenyl)-ethanol dehydrogenase from aromatoleum aromaticum ebn1 (see paper)
35% identity, 93% coverage: 8:257/269 of query aligns to 3:248/248 of 4urfA
- active site: G16 (= G21), S142 (= S149), I152 (≠ F159), Y155 (= Y162), K159 (= K166)
- binding 3-pyridinium-1-ylpropane-1-sulfonate: I92 (= I98), S93 (≠ V99), G94 (≠ S100), E95 (≠ K101), T97 (= T103), E101 (≠ D107), T103 (≠ H109), Q106 (≠ A112), R109 (≠ E115), S175 (≠ P182), G177 (= G184)
- binding magnesium ion: S237 (= S246), Y238 (≠ I247)
- binding nicotinamide-adenine-dinucleotide: G12 (= G17), G14 (≠ S19), N15 (≠ S20), G16 (= G21), I17 (= I22), D36 (≠ Y41), I37 (≠ N42), W41 (≠ A46), D62 (= D68), T63 (≠ F69), N89 (= N95), A90 (= A96), G91 (= G97), I140 (≠ N147), Y155 (= Y162), K159 (= K166), P185 (= P192), I188 (≠ V195), T190 (= T200)
4ureB Molecular genetic and crystal structural analysis of 1-(4- hydroxyphenyl)-ethanol dehydrogenase from aromatoleum aromaticum ebn1 (see paper)
35% identity, 93% coverage: 8:257/269 of query aligns to 3:248/248 of 4ureB
- active site: G16 (= G21), S142 (= S149), I152 (≠ F159), Y155 (= Y162), K159 (= K166)
- binding 3-pyridinium-1-ylpropane-1-sulfonate: N15 (≠ S20), G16 (= G21), I17 (= I22), N89 (= N95), G91 (= G97), Y155 (= Y162), P185 (= P192), A186 (≠ G193)
Query Sequence
>WP_074201862.1 NCBI__GCF_900141795.1:WP_074201862.1
MTVLYPELNNKRVLITGASSGIGAGIARVLAREGCRLVLHYNRNEAGIEKTLSDVQALGA
EAEVLHCDFRELDRVVPFFEAAWQAFNGLDALINNAGIVSKVTSLKDPHGEAFDEVLAVN
LQAPYRLATAFAQHCIEAGHGGVVVNNSSIHGQKSCEWFSAYGAAKAGLDRLTEVQAIEW
GPHGIRLVGIAPGVVPVERTEVILSQPPVKDRWMKCTPLGRYGTTDEMGEAVAFLISDRA
AWMTGSILTVDGGLIARGNYPFRDEMTKS
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory