SitesBLAST
Comparing WP_074882175.1 NCBI__GCF_001623255.1:WP_074882175.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7k3pA The structure of the udp-glc/glcnac 4-epimerase from the human pathogen campylobacter jejuni
50% identity, 97% coverage: 3:322/329 of query aligns to 4:328/329 of 7k3pA
- binding nicotinamide-adenine-dinucleotide: G8 (= G7), G11 (= G10), Y12 (= Y11), I13 (= I12), D32 (= D31), N33 (= N32), S35 (= S34), G37 (= G36), D57 (= D51), L58 (≠ I52), F79 (= F73), A80 (= A74), I83 (= I77), N98 (= N92), Y147 (= Y141), K151 (= K145), Y175 (= Y168), N177 (= N170), V178 (= V171)
2c20A Crystal structure of udp-glucose 4-epimerase
45% identity, 98% coverage: 2:322/329 of query aligns to 2:322/329 of 2c20A
- active site: T117 (= T117), A118 (= A118), A119 (= A119), Y141 (= Y141), K145 (= K145), H184 (≠ T184)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), Q34 (≠ S34), T35 (= T35), G36 (= G36), D51 (= D51), L52 (≠ I52), F73 (= F73), A74 (= A74), A75 (≠ G75), N92 (= N92), Y141 (= Y141), K145 (= K145), Y168 (= Y168), F169 (= F169), V171 (= V171), H184 (≠ T184)
- binding zinc ion: E182 (≠ Q182), H184 (≠ T184), E187 (≠ A187), H189 (= H189)
8wxkA Crystal structure of udp-glucose 4-epimerase (all4713) with udp- glucose and NAD from nostoc sp. Pcc 7120
46% identity, 98% coverage: 2:322/329 of query aligns to 7:329/332 of 8wxkA
- binding nicotinamide-adenine-dinucleotide: G12 (= G7), G15 (= G10), Y16 (= Y11), I17 (= I12), D36 (= D31), N37 (= N32), V39 (≠ S34), Y40 (≠ T35), G41 (= G36), D58 (= D51), T59 (≠ I52), F80 (= F73), S81 (≠ A74), A82 (≠ G75), N99 (= N92), S122 (= S115), T124 (= T117), Y148 (= Y141), K152 (= K145), Y175 (= Y168), A178 (≠ V171), H191 (≠ T184)
- binding uridine-5'-diphosphate-glucose: T124 (= T117), C125 (≠ A118), Y148 (= Y141), N177 (= N170), H196 (= H189), L197 (= L190), S213 (≠ G206), F215 (= F208), C226 (≠ G219), R228 (= R221), V266 (= V259), R289 (= R282), D292 (= D285)
4twrA Structure of udp-glucose 4-epimerase from brucella abortus
43% identity, 95% coverage: 3:316/329 of query aligns to 4:316/325 of 4twrA
- active site: S117 (≠ T117), C118 (≠ A118), A119 (= A119), Y141 (= Y141), K145 (= K145), H184 (≠ T184), H189 (= H189)
- binding nicotinamide-adenine-dinucleotide: G8 (= G7), G11 (= G10), F12 (≠ Y11), I13 (= I12), D32 (= D31), N33 (= N32), L34 (= L33), S35 (= S34), T36 (= T35), G37 (= G36), D51 (= D51), I52 (= I52), F73 (= F73), A74 (= A74), A75 (≠ G75), N92 (= N92), S115 (= S115), K145 (= K145), Y168 (= Y168), A171 (≠ V171), H184 (≠ T184)
- binding zinc ion: E182 (≠ Q182), H184 (≠ T184), E187 (≠ A187), H189 (= H189)
2udpA Udp-galactose 4-epimerase complexed with udp-phenol (see paper)
43% identity, 92% coverage: 1:303/329 of query aligns to 1:313/338 of 2udpA
- active site: S124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ T180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), L33 (= L33), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (= G75), K84 (≠ I77), S122 (= S115), S124 (≠ T117), Y149 (= Y141), K153 (= K145), Y177 (= Y168)
- binding phenyl-uridine-5'-diphosphate: N179 (= N170), N199 (≠ H189), L200 (= L190), A216 (≠ G206), I217 (= I207), F218 (= F208), R231 (= R221), Y233 (= Y223), V269 (= V259), R292 (= R282), D295 (= D285)
1udcA Structure of udp-galactose-4-epimerase complexed with udp-mannose (see paper)
43% identity, 92% coverage: 1:303/329 of query aligns to 1:313/338 of 1udcA
- active site: S124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ T180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (= G75), K84 (≠ I77), S122 (= S115), Y149 (= Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding uridine-5'-diphosphate-mannose: T126 (≠ A119), Y149 (= Y141), N179 (= N170), N199 (≠ H189), L200 (= L190), L215 (= L205), A216 (≠ G206), I217 (= I207), F218 (= F208), R231 (= R221), Y233 (= Y223), V269 (= V259), R292 (= R282)
P09147 UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Escherichia coli (strain K12) (see 10 papers)
43% identity, 92% coverage: 1:303/329 of query aligns to 1:313/338 of P09147
- YI 11:12 (= YI 11:12) binding NAD(+)
- DNLCNS 31:36 (≠ DNLSTG 31:36) binding NAD(+)
- DI 58:59 (= DI 51:52) binding NAD(+)
- FAGLK 80:84 (≠ FAGSI 73:77) binding NAD(+)
- N99 (= N92) binding NAD(+)
- S124 (≠ T117) binding NAD(+); mutation to A: No major structural changes. Catalytic efficiency is very low and affinity binding is 21% of the wild-type enzyme.; mutation to T: No major structural changes. Catalytic efficiency is about 30% of that of the wild-type enzyme, and affinity binding is similar to that of the native enzyme.
- Y149 (= Y141) active site, Proton acceptor; binding NAD(+); mutation to F: No major structural changes. Catalytic efficiency is very low and affinity binding is 12% of the wild-type enzyme.
- K153 (= K145) binding NAD(+); mutation to A: Decreases the catalytic activity. Not reduced by sugars in the presence or absence of UMP. It contains very little NADH.; mutation to M: Decreases the catalytic activity. Not reduced by sugars in the presence or absence of UMP. It contains very little NADH.
- F178 (= F169) binding NAD(+)
- Y299 (≠ V289) mutation to C: Loss of epimerase activity with UDP-Gal by almost 5-fold, but it results in a gain of epimerase activity with uridine diphosphate N-acetylglucosamine (UDP-GlcNAc) by 230-fold with minimal changes in its three-dimensional structure.
1udaA Structure of udp-galactose-4-epimerase complexed with udp-4-deoxy-4- fluoro-alpha-d-galactose (see paper)
43% identity, 92% coverage: 1:303/329 of query aligns to 1:313/338 of 1udaA
- active site: S124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ T180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), L33 (= L33), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (= G75), K84 (≠ I77), S122 (= S115), Y149 (= Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding uridine-5'-diphosphate-4-deoxy-4-fluoro-alpha-d-galactose: T126 (≠ A119), N179 (= N170), N199 (≠ H189), L200 (= L190), A216 (≠ G206), I217 (= I207), F218 (= F208), R231 (= R221), Y233 (= Y223), R292 (= R282), D295 (= D285), Y299 (≠ V289)
1naiA Udp-galactose 4-epimerase from escherichia coli, oxidized (see paper)
43% identity, 92% coverage: 1:303/329 of query aligns to 1:313/338 of 1naiA
- active site: S124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ T180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), L33 (= L33), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (= G75), K84 (≠ I77), Y149 (= Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding 1,3-propandiol: N35 (≠ T35), K84 (≠ I77), E191 (≠ Q182), P193 (≠ T184)
- binding uridine-5'-diphosphate: N179 (= N170), N199 (≠ H189), L200 (= L190), L215 (= L205), A216 (≠ G206), R231 (= R221), Y233 (= Y223), R292 (= R282)
1lrjA Crystal structure of e. Coli udp-galactose 4-epimerase complexed with udp-n-acetylglucosamine (see paper)
43% identity, 92% coverage: 1:303/329 of query aligns to 1:313/338 of 1lrjA
- active site: S124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ T180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), L33 (= L33), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (= G75), K84 (≠ I77), Y149 (= Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding uridine-diphosphate-n-acetylglucosamine: V86 (= V79), S124 (≠ T117), F178 (= F169), N179 (= N170), L200 (= L190), L215 (= L205), A216 (≠ G206), F218 (= F208), R231 (= R221), Y233 (= Y223), V269 (= V259), R292 (= R282), D295 (= D285)
1kvrA Udp-galactose 4-epimerase complexed with udp-phenol (see paper)
43% identity, 92% coverage: 1:303/329 of query aligns to 1:313/338 of 1kvrA
- active site: A124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ T180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (= G75), K84 (≠ I77), S122 (= S115), S123 (= S116), Y149 (= Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding uridine-5'-diphosphate: N179 (= N170), N198 (≠ T188), N199 (≠ H189), L200 (= L190), A216 (≠ G206), I217 (= I207), F218 (= F208), R231 (= R221), Y233 (= Y223), V269 (= V259), R292 (= R282), D295 (= D285)
1a9yA Udp-galactose 4-epimerase mutant s124a/y149f complexed with udp- glucose (see paper)
43% identity, 92% coverage: 1:303/329 of query aligns to 1:313/338 of 1a9yA
- active site: A124 (≠ T117), A125 (= A118), T126 (≠ A119), F149 (≠ Y141), K153 (= K145)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (= G75), K84 (≠ I77), S122 (= S115), S123 (= S116), F149 (≠ Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding uridine-5'-diphosphate-glucose: A125 (= A118), T126 (≠ A119), N179 (= N170), N199 (≠ H189), L200 (= L190), A216 (≠ G206), I217 (= I207), F218 (= F208), R231 (= R221), Y233 (= Y223), R292 (= R282), D295 (= D285), Y299 (≠ V289)
7xpoA Crystal structure of udp-glc/glcnac 4-epimerase with NAD/udp-glc (see paper)
40% identity, 98% coverage: 2:322/329 of query aligns to 3:337/344 of 7xpoA