Comparing WP_075385005.1 NCBI__GCF_002019605.1:WP_075385005.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 14 hits to proteins with known functional sites (download)
3oa4A Crystal structure of hypothetical protein bh1468 from bacillus halodurans c-125
70% identity, 91% coverage: 9:137/141 of query aligns to 4:132/138 of 3oa4A
6wfhA Streptomyces coelicolor methylmalonyl-coa epimerase substrate complex (see paper)
39% identity, 89% coverage: 9:134/141 of query aligns to 4:135/139 of 6wfhA
6wf6A Streptomyces coelicolor methylmalonyl-coa epimerase (see paper)
39% identity, 89% coverage: 9:134/141 of query aligns to 4:135/141 of 6wf6A
6xbqA Streptomyces coelicolor methylmalonyl-coa epimerase in complex with carboxy-carba(dethia)-coa
39% identity, 89% coverage: 9:134/141 of query aligns to 4:135/144 of 6xbqA
6wfiA Methylmalonyl-coa epimerase in complex with 2-nitronate-propionyl-coa (see paper)
39% identity, 89% coverage: 9:134/141 of query aligns to 4:135/144 of 6wfiA
6wf7A Methylmalonyl-coa epimerase in complex with methylmalonyl-coa and nh4+ (see paper)
39% identity, 89% coverage: 9:134/141 of query aligns to 4:135/144 of 6wf7A
6xbtA Streptomyces coelicolor methylmalonyl-coa epimerase (q60a) in complex with 2-nitronate-propionyl-coa
39% identity, 89% coverage: 9:134/141 of query aligns to 4:135/140 of 6xbtA
Q96PE7 Methylmalonyl-CoA epimerase, mitochondrial; DL-methylmalonyl-CoA racemase; EC 5.1.99.1 from Homo sapiens (Human) (see paper)
38% identity, 89% coverage: 9:134/141 of query aligns to 47:173/176 of Q96PE7
6qh4C Crystal structure of human methylmalonyl-coa epimerase (mcee) p.Arg143cys variant
38% identity, 93% coverage: 4:134/141 of query aligns to 6:135/138 of 6qh4C
2qh0A Crystal structure of a glyoxalase from clostridium acetobutylicum
31% identity, 91% coverage: 9:137/141 of query aligns to 3:129/129 of 2qh0A
7yvvA Acmp1, r-4-hydroxymandelate synthase
28% identity, 71% coverage: 9:108/141 of query aligns to 146:254/335 of 7yvvA
Sites not aligning to the query:
P0AC81 Lactoylglutathione lyase; Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase; EC 4.4.1.5 from Escherichia coli (strain K12) (see paper)
28% identity, 81% coverage: 9:122/141 of query aligns to 2:113/135 of P0AC81
Sites not aligning to the query:
1fa6A Crystal structure of the co(ii)-bound glyoxalase i of escherichia coli (see paper)
28% identity, 81% coverage: 9:122/141 of query aligns to 2:113/128 of 1fa6A
Sites not aligning to the query:
1fa5A Crystal structure of the zn(ii)-bound glyoxalase i of escherichia coli (see paper)
28% identity, 81% coverage: 9:122/141 of query aligns to 2:113/128 of 1fa5A
Sites not aligning to the query:
>WP_075385005.1 NCBI__GCF_002019605.1:WP_075385005.1
MQKQNAPKKIDHIGIAVQSIEKTLPFYTEQLNLELLAIEEVSSQGVKVAFIKIGESKIEL
LEPLHDESPIAKFIAKKGEGIHHIALGVAGIQERINEIREKGIQMINNEPVKGAGGAQVA
FIHPKSAGGILFEFCEKNKSE
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory