Comparing WP_075858772.1 NCBI__GCF_001950255.1:WP_075858772.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
6cyzA Mycobacterial homoserine kinase thrb in complex with amppnp
39% identity, 84% coverage: 4:258/304 of query aligns to 12:263/295 of 6cyzA
P00547 Homoserine kinase; HK; HSK; EC 2.7.1.39 from Escherichia coli (strain K12) (see paper)
31% identity, 96% coverage: 1:292/304 of query aligns to 1:305/310 of P00547
1h74B Crystal structure of homoserine kinase complexed with ile (see paper)
32% identity, 90% coverage: 2:275/304 of query aligns to 3:283/296 of 1h74B
1h74A Crystal structure of homoserine kinase complexed with ile (see paper)
32% identity, 90% coverage: 2:275/304 of query aligns to 3:283/296 of 1h74A
1h73A Crystal structure of homoserine kinase complexed with threonine (see paper)
32% identity, 90% coverage: 2:275/304 of query aligns to 3:283/296 of 1h73A
1h72C Crystal structure of homoserine kinase complexed with hse (see paper)
32% identity, 90% coverage: 2:275/304 of query aligns to 3:283/296 of 1h72C
1fwkA Crystal structure of homoserine kinase complexed with adp (see paper)
32% identity, 90% coverage: 2:275/304 of query aligns to 3:283/296 of 1fwkA
Q8L7R2 Homoserine kinase; Protein DOWNY MILDEW RESISTANT 1; EC 2.7.1.39 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
34% identity, 89% coverage: 2:273/304 of query aligns to 54:342/370 of Q8L7R2
Sites not aligning to the query:
4dxlA Crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abscessus, bound to cmp and atp (see paper)
24% identity, 76% coverage: 23:254/304 of query aligns to 41:264/304 of 4dxlA
Sites not aligning to the query:
3pyeA Mycobacterium tuberculosis 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (ispe) in complex with cdpme
27% identity, 34% coverage: 23:125/304 of query aligns to 37:137/301 of 3pyeA
Sites not aligning to the query:
3pyfA Mycobacterium tuberculosis 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (ispe) in complex with amp-pnp
27% identity, 34% coverage: 23:125/304 of query aligns to 33:133/296 of 3pyfA
Sites not aligning to the query:
3pygA Mycobacterium tuberculosis 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (ispe) in complex with adp
27% identity, 34% coverage: 23:125/304 of query aligns to 34:134/298 of 3pygA
Sites not aligning to the query:
>WP_075858772.1 NCBI__GCF_001950255.1:WP_075858772.1
MVRVLIPATSANLGPGFDAVGMALSFYNEVCLKPSPKELEIDVWGDGSEIIPKDRNNLVY
IAVTKVFESLGKIPRNLKLSLKNRVPFARGLGSSAAAIVGGLVAANAYLGNPLPTDELLR
LATELEGHPDNVAPALLGGVVVSGFDRDKVKYLKLPVPEVEVVVAIPKFQLKTVDSRQIL
PVEIPFSQAVLNVNRVSFLIAAFCLKKYEYLQIGMEDYLHQPYRSQLIPGFYQVMEEAKK
AGAYGVALSGSGPTVIAFARESEAVGRAIREAFLNFNVEAEIIYTRPENRGAIDLIMHKG
EGDC
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory