SitesBLAST
Comparing WP_077275711.1 NCBI__GCF_001998885.1:WP_077275711.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1gegE Cryatal structure analysis of meso-2,3-butanediol dehydrogenase (see paper)
70% identity, 98% coverage: 6:260/260 of query aligns to 2:256/256 of 1gegE
- active site: G13 (= G17), S139 (= S143), Y152 (= Y156), K156 (= K160), V197 (≠ T201)
- binding alpha-D-glucopyranose: R63 (= R67), D64 (≠ E68), F67 (= F71), E123 (≠ K127)
- binding nicotinamide-adenine-dinucleotide: G9 (= G13), Q12 (= Q16), I14 (= I18), D33 (= D37), Y34 (= Y38), V58 (= V62), D59 (= D63), V60 (= V64), N86 (= N90), A87 (= A91), I109 (= I113), S139 (= S143), Y152 (= Y156), K156 (= K160), P182 (= P186), V185 (= V189), T187 (= T191), M189 (= M193)
Q48436 Diacetyl reductase [(S)-acetoin forming]; Acetoin(diacetyl) reductase; AR; Meso-2,3-butanediol dehydrogenase; EC 1.1.1.304 from Klebsiella pneumoniae (see paper)
70% identity, 98% coverage: 6:260/260 of query aligns to 2:256/256 of Q48436
- 6:33 (vs. 10:37, 71% identical) binding NAD(+)
- D59 (= D63) binding NAD(+)
- K156 (= K160) binding NAD(+)
3wyeA Crystal structure of chimeric engineered (2s,3s)-butanediol dehydrogenase complexed with NAD+
60% identity, 98% coverage: 6:260/260 of query aligns to 1:255/255 of 3wyeA
- active site: G12 (= G17), S138 (= S143), Y151 (= Y156), K155 (= K160), L196 (≠ T201)
- binding nicotinamide-adenine-dinucleotide: G8 (= G13), Q11 (= Q16), G12 (= G17), I13 (= I18), D32 (= D37), Y33 (= Y38), V57 (= V62), D58 (= D63), V59 (= V64), N85 (= N90), A86 (= A91), S138 (= S143), Y151 (= Y156), K155 (= K160), P181 (= P186), G182 (= G187), V184 (= V189), T186 (= T191), M188 (= M193), W189 (≠ M194)
Q9ZNN8 L-2,3-butanediol dehydrogenase; L-BDH; (S,S)-butanediol dehydrogenase; Diacetyl reductase [(S)-acetoin forming]; EC 1.1.1.76; EC 1.1.1.304 from Corynebacterium glutamicum (Brevibacterium saccharolyticum) (see paper)
48% identity, 98% coverage: 7:260/260 of query aligns to 3:258/258 of Q9ZNN8
- QGI 12:14 (= QGI 16:18) binding NAD(+)
- D33 (= D37) binding NAD(+)
- Q37 (≠ N39) binding NAD(+)
- DV 61:62 (= DV 63:64) binding NAD(+)
- N88 (= N90) binding NAD(+)
- I142 (≠ Q144) mutation to Q: Loss of L-BD oxidizing activity, and does not gain the ability to use meso-BD as substrate; when associated with N-148.; mutation to Q: Loss of L-BD oxidizing activity. Does not gain the ability to use meso-BD as substrate.
- F148 (≠ N150) mutation to N: Loss of L-BD oxidizing activity, and does not gain the ability to use meso-BD as substrate; when associated with Q-142.; mutation to N: Loss of L-BD oxidizing activity. Does not gain the ability to use meso-BD as substrate.
- Y154 (= Y156) binding NAD(+)
- K158 (= K160) binding NAD(+)
- PGIVGT 184:189 (≠ PGIVKT 186:191) binding NAD(+)
3a28C Crystal structure of l-2,3-butanediol dehydrogenase (see paper)
48% identity, 98% coverage: 7:260/260 of query aligns to 2:257/257 of 3a28C
- active site: G12 (= G17), S140 (= S143), Y153 (= Y156), K157 (= K160), L198 (≠ T201)
- binding nicotinamide-adenine-dinucleotide: G8 (= G13), Q11 (= Q16), I13 (= I18), D32 (= D37), L33 (≠ Y38), Q36 (≠ N39), L59 (≠ V62), D60 (= D63), V61 (= V64), N87 (= N90), S140 (= S143), Y153 (= Y156), K157 (= K160), P183 (= P186), V186 (= V189), T188 (= T191), M190 (= M193), W191 (≠ M194)
6pejA Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol
36% identity, 95% coverage: 9:256/260 of query aligns to 9:253/257 of 6pejA
4nbuB Crystal structure of fabg from bacillus sp (see paper)
35% identity, 100% coverage: 1:259/260 of query aligns to 2:244/244 of 4nbuB
- active site: G18 (= G17), N111 (= N114), S139 (= S143), Q149 (≠ L153), Y152 (= Y156), K156 (= K160)
- binding acetoacetyl-coenzyme a: D93 (≠ Q96), K98 (≠ E101), S139 (= S143), N146 (= N150), V147 (≠ P151), Q149 (≠ L153), Y152 (= Y156), F184 (≠ I188), M189 (= M193), K200 (≠ Q215)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G14 (= G13), N17 (≠ Q16), G18 (= G17), I19 (= I18), D38 (= D37), F39 (≠ Y38), V59 (= V62), D60 (= D63), V61 (= V64), N87 (= N90), A88 (= A91), G89 (= G92), I90 (≠ L93), T137 (≠ A141), S139 (= S143), Y152 (= Y156), K156 (= K160), P182 (= P186), F184 (≠ I188), T185 (≠ V189), T187 (= T191), M189 (= M193)
3ak4A Crystal structure of nadh-dependent quinuclidinone reductase from agrobacterium tumefaciens
38% identity, 97% coverage: 9:260/260 of query aligns to 10:258/258 of 3ak4A
- active site: G18 (= G17), S141 (= S143), L151 (= L153), Y154 (= Y156), K158 (= K160), E199 (≠ T201)
- binding nicotinamide-adenine-dinucleotide: K17 (≠ Q16), G18 (= G17), I19 (= I18), D38 (= D37), L39 (≠ Y38), V60 (= V62), D61 (= D63), V62 (= V64), N88 (= N90), A89 (= A91), G90 (= G92), T139 (≠ A141), S141 (= S143), Y154 (= Y156), K158 (= K160), G185 (= G187), V187 (= V189), T189 (= T191), M191 (= M193)
6j7uA Crystal structure of blue fluorescent protein from metagenomic library in complex with NADPH (see paper)
40% identity, 96% coverage: 8:256/260 of query aligns to 7:244/247 of 6j7uA
- active site: G16 (= G17), S142 (= S142), Y156 (= Y156)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G12 (= G13), S14 (≠ G15), R15 (≠ Q16), I17 (= I18), Y36 (vs. gap), V37 (= V35), S38 (≠ A36), S41 (≠ N39), D65 (= D63), S66 (≠ V64), N92 (= N90), A93 (= A91), G94 (= G92), I115 (= I113), G141 (≠ A141), S142 (= S142), Y156 (= Y156), K160 (= K160), P186 (= P186), T191 (= T191), M193 (= M193), N194 (≠ M194)
6zzqA Crystal structure of (r)-3-hydroxybutyrate dehydrogenase from acinetobacter baumannii complexed with NAD+ and acetoacetate (see paper)
35% identity, 97% coverage: 8:258/260 of query aligns to 8:258/260 of 6zzqA
- active site: G17 (= G17), S142 (= S143), Y155 (= Y156)
- binding acetoacetic acid: Q94 (≠ G94), S142 (= S143), K152 (≠ L153), Y155 (= Y156), Q196 (≠ I197)
- binding nicotinamide-adenine-dinucleotide: G13 (= G13), S16 (≠ Q16), G17 (= G17), I18 (= I18), D37 (= D37), M38 (≠ Y38), D63 (= D63), V64 (= V64), N90 (= N90), A91 (= A91), G92 (= G92), M140 (≠ A141), A141 (≠ S142), S142 (= S143), Y155 (= Y156), K159 (= K160), Y187 (≠ I188), V188 (= V189), T190 (= T191)
6zzsD Crystal structure of (r)-3-hydroxybutyrate dehydrogenase from acinetobacter baumannii complexed with NAD+ and 3-oxovalerate (see paper)
35% identity, 97% coverage: 8:258/260 of query aligns to 9:259/261 of 6zzsD
- active site: G18 (= G17), S143 (= S143), Y156 (= Y156)
- binding nicotinamide-adenine-dinucleotide: G14 (= G13), S17 (≠ Q16), I19 (= I18), D38 (= D37), M39 (≠ Y38), D64 (= D63), V65 (= V64), N91 (= N90), A92 (= A91), G93 (= G92), M141 (≠ A141), A142 (≠ S142), S143 (= S143), Y156 (= Y156), K160 (= K160), P186 (= P186), G187 (= G187), V189 (= V189), T191 (= T191), L193 (≠ M193)
- binding 3-oxidanylidenepentanoic acid: Q95 (≠ G94), S143 (= S143), N145 (≠ A145), K153 (≠ L153), Y156 (= Y156), Q197 (≠ I197)
8cxaA Crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase from mycobacterium smegmatis with bound NAD
37% identity, 99% coverage: 2:259/260 of query aligns to 1:250/251 of 8cxaA
- binding nicotinamide-adenine-dinucleotide: G12 (= G13), Q15 (= Q16), G16 (= G17), I17 (= I18), D36 (= D37), V63 (= V64), N89 (= N90), A91 (≠ G92), S94 (≠ P95), I142 (≠ A141), S143 (= S142), S144 (= S143), Y157 (= Y156), K161 (= K160), P187 (= P186), H188 (vs. gap), I190 (= I188), I194 (= I197)
3osuA Crystal structure of the 3-oxoacyl-acyl carrier protein reductase, fabg, from staphylococcus aureus
35% identity, 96% coverage: 9:257/260 of query aligns to 7:244/246 of 3osuA
1vl8B Crystal structure of gluconate 5-dehydrogenase (tm0441) from thermotoga maritima at 2.07 a resolution
33% identity, 98% coverage: 5:260/260 of query aligns to 5:252/252 of 1vl8B
- active site: G17 (= G17), S143 (= S142), I154 (≠ L153), Y157 (= Y156), K161 (= K160)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G13 (= G13), R16 (≠ Q16), G17 (= G17), L18 (≠ I18), S37 (≠ D37), R38 (≠ Y38), C63 (≠ V62), D64 (= D63), V65 (= V64), A91 (≠ N90), A92 (= A91), G93 (= G92), I94 (≠ L93), V114 (≠ I113), I141 (≠ N140), S143 (= S142), Y157 (= Y156), K161 (= K160), P187 (= P186), G188 (= G187), Y190 (≠ V189), T192 (= T191), M194 (= M193), T195 (≠ M194)
H9XP47 Meso-2,3-butanediol dehydrogenase; BDH; meso-2,3-BDH; (R,S)-butane-2,3-diol dehydrogenase; NAD(H)-dependent meso-2,3-BDH; SmBdh; EC 1.1.1.- from Serratia marcescens (see paper)
33% identity, 97% coverage: 8:258/260 of query aligns to 7:242/251 of H9XP47
- N15 (≠ Q16) binding NAD(+)
- M17 (≠ I18) binding NAD(+)
- D36 (= D37) binding NAD(+)
- D60 (= D63) binding NAD(+)
- V61 (= V64) binding NAD(+)
- N87 (= N90) binding NAD(+)
- S138 (= S143) binding (R)-acetoin; binding (S)-acetoin
- V139 (≠ Q144) mutation to Q: Retains 50% of activity with acetoin as substrate; when associated with A-247.
- S140 (≠ A145) binding (R)-acetoin
- Y151 (= Y156) binding (R)-acetoin; binding (S)-acetoin; binding NAD(+)
- K155 (= K160) binding NAD(+)
- V184 (= V189) binding NAD(+)
- T186 (= T191) binding NAD(+)
- RDK 197:199 (≠ LEQ 213:215) mutation to SEAAGKPLGYGTET: Mimics longer alpha6 helix. Retains 3% of activity with acetoin as substrate.
Sites not aligning to the query:
- 247 Q→A: Retains 10% of activity with acetoin as substrate. Retains 50% of activity with acetoin as substrate; when associated with Q-139.
6vspB Structure of serratia marcescens 2,3-butanediol dehydrogenase mutant q247a (see paper)
33% identity, 97% coverage: 8:258/260 of query aligns to 9:244/252 of 6vspB