SitesBLAST
Comparing WP_078210593.1 NCBI__GCF_002017945.1:WP_078210593.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3uqdB Crystal structure of the phosphofructokinase-2 from escherichia coli in complex with substrates and products (see paper)
41% identity, 97% coverage: 6:307/310 of query aligns to 4:307/309 of 3uqdB
- active site: G253 (= G253), A254 (= A254), G255 (= G255), D256 (= D256)
- binding adenosine-5'-diphosphate: K185 (= K185), N187 (= N187), S224 (= S224), G226 (= G226), P227 (= P227), G229 (= G229), S248 (≠ K248), M258 (= M258), V280 (= V280), G283 (= G283), S284 (= S284)
- binding adenosine-5'-triphosphate: Y23 (≠ V25), K27 (= K29)
- binding 6-O-phosphono-beta-D-fructofuranose: K27 (= K29), R29 (= R31)
- binding 1,6-di-O-phosphono-beta-D-fructofuranose: D14 (= D16), G39 (= G41), N43 (= N45), R90 (= R92), R105 (= R107), S139 (= S140), G253 (= G253)
3uqdA Crystal structure of the phosphofructokinase-2 from escherichia coli in complex with substrates and products (see paper)
41% identity, 97% coverage: 6:307/310 of query aligns to 4:307/309 of 3uqdA
- active site: G253 (= G253), A254 (= A254), G255 (= G255), D256 (= D256)
- binding adenosine-5'-triphosphate: K185 (= K185), S224 (= S224), G226 (= G226), P227 (= P227), G229 (= G229), T251 (= T251), G255 (= G255), M258 (= M258), V280 (= V280), G283 (= G283), S284 (= S284), T287 (= T287)
- binding 6-O-phosphono-beta-D-fructofuranose: D14 (= D16), G38 (= G40), G39 (= G41), N43 (= N45), R90 (= R92), S139 (= S140), D256 (= D256)
- binding 1,6-di-O-phosphono-beta-D-fructofuranose: K27 (= K29), R29 (= R31)
3n1cA Crystal structure of the phosphofructokinase-2 from escherichia coli in complex with fructose-6-phosphate (see paper)
41% identity, 97% coverage: 6:307/310 of query aligns to 4:307/309 of 3n1cA
- active site: G253 (= G253), A254 (= A254), G255 (= G255), D256 (= D256)
- binding 6-O-phosphono-beta-D-fructofuranose: D14 (= D16), K27 (= K29), R29 (= R31), G39 (= G41), N43 (= N45), R90 (= R92), G138 (= G139), S139 (= S140), D256 (= D256)
P06999 ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; 6-phosphofructokinase isozyme II; Phosphohexokinase 2; EC 2.7.1.11 from Escherichia coli (strain K12) (see 3 papers)
41% identity, 97% coverage: 6:307/310 of query aligns to 4:307/309 of P06999
- K27 (= K29) binding ATP; binding ATP
- KPN 185:187 (= KPN 185:187) binding in other chain
- NQK 187:189 (≠ NVG 187:189) binding in other chain
- E190 (= E190) mutation to Q: Causes a 50-fold decrease in the kcat value and a 15-fold increment in the apparent KM for ATP.
- SLGPQG 224:229 (= SLGPQG 224:229) binding in other chain
- S248 (≠ K248) binding in other chain
- S250 (= S250) binding K(+)
- V252 (= V252) binding K(+)
- V280 (= V280) binding in other chain
- S284 (= S284) binding in other chain
- A286 (= A286) binding K(+)
- N289 (= N289) binding K(+)
- G291 (= G291) binding K(+)
- R293 (≠ Q293) binding K(+)
3uqeA Crystal structure of the phosphofructokinase-2 mutant y23d from escherichia coli
41% identity, 97% coverage: 6:307/310 of query aligns to 4:305/307 of 3uqeA
- active site: G253 (= G253), A254 (= A254), G255 (= G255), D256 (= D256)
- binding adenosine-5'-triphosphate: K185 (= K185), N187 (= N187), S224 (= S224), G226 (= G226), P227 (= P227), G229 (= G229), S248 (≠ K248), A254 (= A254), G255 (= G255), M258 (= M258), V280 (= V280), G283 (= G283), S284 (= S284), T287 (= T287)
- binding pyrophosphate 2-: N187 (= N187), K189 (≠ G189)
3cqdA Structure of the tetrameric inhibited form of phosphofructokinase-2 from escherichia coli (see paper)
40% identity, 97% coverage: 6:307/310 of query aligns to 4:302/304 of 3cqdA
- active site: G253 (= G253), A254 (= A254), G255 (= G255), D256 (= D256)
- binding adenosine-5'-triphosphate: Y23 (≠ V25), G26 (≠ Q28), K27 (= K29), K185 (= K185), N187 (= N187), N187 (= N187), K189 (≠ G189), S224 (= S224), G226 (= G226), P227 (= P227), G229 (= G229), S248 (≠ K248), T251 (= T251), A254 (= A254), G255 (= G255), M258 (= M258), V280 (= V280), G283 (= G283), S284 (= S284), T287 (= T287)
P9WID3 ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; Phosphofructokinase B; Phosphohexokinase 2; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
41% identity, 97% coverage: 6:305/310 of query aligns to 14:314/339 of P9WID3
- K283 (≠ E274) modified: Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-Cter in protein Pup)
2f02A Crystal structure of lacc from enterococcus faecalis in complex with atp
34% identity, 90% coverage: 6:285/310 of query aligns to 3:285/319 of 2f02A
- binding adenosine-5'-triphosphate: N186 (= N187), S224 (= S224), G226 (= G226), I243 (≠ A243), I246 (≠ V246), G253 (= G253), S254 (≠ A254), G255 (= G255), T258 (≠ M258), M280 (≠ V280), G283 (= G283), M284 (≠ S284)
2jg1C Structure of staphylococcus aureus d-tagatose-6-phosphate kinase with cofactor and substrate (see paper)
27% identity, 98% coverage: 6:308/310 of query aligns to 7:311/315 of 2jg1C
- active site: G256 (= G253), S257 (≠ A254), G258 (= G255), D259 (= D256)
- binding phosphoaminophosphonic acid-adenylate ester: S227 (= S224), G229 (= G226), A230 (≠ P227), G232 (= G229), I246 (≠ A243), I249 (≠ V246), V251 (≠ K248), V255 (= V252), G256 (= G253), S257 (≠ A254), G258 (= G255), D259 (= D256), T261 (≠ M258), N283 (≠ V280), G286 (= G283), M287 (≠ S284)
- binding 6-O-phosphono-beta-D-tagatofuranose: D17 (= D16), G42 (= G41), K43 (≠ G42), R93 (= R92), C95 (≠ S94), L108 (≠ G109), G140 (= G139), S141 (= S140), D259 (= D256)
2jg1A Structure of staphylococcus aureus d-tagatose-6-phosphate kinase with cofactor and substrate (see paper)
27% identity, 98% coverage: 6:308/310 of query aligns to 10:314/318 of 2jg1A
- active site: G259 (= G253), S260 (≠ A254), G261 (= G255), D262 (= D256)
- binding phosphoaminophosphonic acid-adenylate ester: K46 (≠ G42), N193 (= N187), S230 (= S224), G232 (= G226), G235 (= G229), I252 (≠ V246), V254 (≠ K248), G259 (= G253), S260 (≠ A254), G261 (= G255), D262 (= D256), T264 (≠ M258), N286 (≠ V280), G289 (= G283), M290 (≠ S284)
2jgvB Structure of staphylococcus aureus d-tagatose-6-phosphate kinase in complex with adp (see paper)
27% identity, 98% coverage: 6:308/310 of query aligns to 6:310/314 of 2jgvB
- active site: G255 (= G253), S256 (≠ A254), G257 (= G255), D258 (= D256)
- binding adenosine-5'-diphosphate: S226 (= S224), A229 (≠ P227), I248 (≠ V246), P253 (≠ T251), S256 (≠ A254), G257 (= G255), N282 (≠ V280), G285 (= G283), M286 (≠ S284)
3ie7A The crystal structure of phosphofructokinase (lin2199) from listeria innocua in complex with atp at 1.6a
28% identity, 96% coverage: 6:303/310 of query aligns to 3:299/309 of 3ie7A
- binding adenosine-5'-triphosphate: N188 (= N187), S220 (= S224), G222 (= G226), A223 (≠ P227), G225 (= G229), V242 (= V246), G249 (= G253), A250 (= A254), G251 (= G255), D252 (= D256), S279 (≠ G283), V283 (≠ T287)
3julA Crystal structure of listeria innocua d-tagatose-6-phosphate kinase bound with substrate
27% identity, 92% coverage: 6:290/310 of query aligns to 3:279/298 of 3julA
2ajrA Crystal structure of possible 1-phosphofructokinase (ec 2.7.1.56) (tm0828) from thermotoga maritima at 2.46 a resolution
27% identity, 91% coverage: 6:287/310 of query aligns to 3:294/320 of 2ajrA
Sites not aligning to the query:
5eynA Crystal structure of fructokinase from vibrio cholerae o395 in fructose, adp, beryllium trifluoride and calcium ion bound form
27% identity, 81% coverage: 40:291/310 of query aligns to 27:290/306 of 5eynA
- active site: G246 (= G253), A247 (= A254), G248 (= G255), D249 (= D256)
- binding adenosine-5'-diphosphate: H91 (≠ N103), T217 (≠ S224), G219 (= G226), A220 (≠ P227), A238 (≠ N245), V239 (= V246), T244 (= T251), G246 (= G253), A247 (= A254), G248 (= G255), F251 (≠ M258), N279 (≠ V280), G282 (= G283), A283 (≠ S284)
- binding beryllium trifluoride ion: G246 (= G253), G248 (= G255), D249 (= D256)
- binding beta-D-fructofuranose: G28 (= G41), A29 (≠ G42), N32 (= N45), F96 (= F108), F98 (= F110), R159 (≠ G189), D249 (= D256)
Sites not aligning to the query:
5yggA Crystal structure of fructokinase double-mutant (t261c-h108c) from vibrio cholerae o395 in fructose, adp and potassium ion bound form (see paper)
27% identity, 81% coverage: 40:291/310 of query aligns to 31:294/310 of 5yggA
- binding adenosine-5'-diphosphate: K188 (vs. gap), T221 (≠ S224), G223 (= G226), A242 (≠ N245), V243 (= V246), F255 (≠ M258), N283 (≠ V280), G286 (= G283), A287 (≠ S284)
- binding beta-D-fructofuranose: G32 (= G41), A33 (≠ G42), F100 (= F108), F102 (= F110), R163 (≠ G189), D253 (= D256)
Sites not aligning to the query:
1tz3A Crystal structure of aminoimidazole riboside kinase complexed with aminoimidazole riboside (see paper)
32% identity, 36% coverage: 181:291/310 of query aligns to 172:281/299 of 1tz3A
Sites not aligning to the query:
1tz6A Crystal structure of aminoimidazole riboside kinase from salmonella enterica complexed with aminoimidazole riboside and atp analog (see paper)
32% identity, 36% coverage: 181:291/310 of query aligns to 172:281/297 of 1tz6A
- active site: G238 (= G253), A239 (= A254), G240 (= G255), D241 (= D256)
- binding phosphomethylphosphonic acid adenylate ester: K176 (= K185), E181 (= E190), S209 (= S224), G211 (= G226), A212 (≠ P227), G214 (= G229), A239 (= A254), G240 (= G255), F243 (≠ M258), N270 (≠ V280), G273 (= G283), A274 (≠ S284)
- binding 5-aminoimidazole ribonucleoside: D241 (= D256)
Sites not aligning to the query:
Q8ZKR2 Aminoimidazole riboside kinase; AIRs kinase; EC 2.7.1.223 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
32% identity, 36% coverage: 181:291/310 of query aligns to 183:292/319 of Q8ZKR2
- A183 (= A181) binding K(+)
- G213 (= G217) binding K(+)
- D246 (≠ S250) binding K(+)
- T248 (≠ V252) binding K(+)
- D252 (= D256) binding 5-amino-1-(beta-D-ribosyl)imidazole
- A287 (= A286) binding K(+)
- A290 (≠ N289) binding K(+)
- G292 (= G291) binding K(+)
Sites not aligning to the query:
- 16 binding 5-amino-1-(beta-D-ribosyl)imidazole
- 31 binding 5-amino-1-(beta-D-ribosyl)imidazole
- 101 binding 5-amino-1-(beta-D-ribosyl)imidazole
- 162 binding 5-amino-1-(beta-D-ribosyl)imidazole
- 180 binding K(+)
- 181 binding K(+)
3in1A Crystal structure of a putative ribokinase in complex with adp from e.Coli
26% identity, 81% coverage: 40:291/310 of query aligns to 39:293/312 of 3in1A
- active site: R106 (≠ E121), G255 (= G253), A256 (= A254), G257 (= G255), D258 (= D256)
- binding adenosine-5'-diphosphate: N194 (= N187), K225 (≠ S224), G227 (= G226), G230 (= G229), A244 (= A243), T253 (= T251), N282 (≠ V280), A285 (≠ G283)
Query Sequence
>WP_078210593.1 NCBI__GCF_002017945.1:WP_078210593.1
MKAFDIVTLTVNPAVDKSTSFKGLVAEQKIRCEVPRYDAGGGGINVSKAIARLGGNSMAL
FTSGGAMGQLLEELVAKENIASEAVAVESWTRESFVAVDTNTNSQYRFGFTGGAITPEES
ECFLAKIAEFKPKFLVGSGSLNEGLNADFYQKVAQIAKANGSKLIVDTSGAALEKVLEVG
AYLIKPNVGELAKLIGEERLEMEEVNEAAKKIIAKGGAEIVVVSLGPQGAVLVTKDHYEF
VPAPNVAKKSTVGAGDSMVGGMVWALSQNKPLKEVIRWGVACGSAATMNEGTQLFKGSDA
QRLFDWLKDK
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory