Comparing WP_078427057.1 NCBI__GCF_002019605.1:WP_078427057.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 10 hits to proteins with known functional sites (download)
4knvA The crystal structure of apo human hdhd4 from se-mad (see paper)
29% identity, 100% coverage: 2:262/262 of query aligns to 1:235/241 of 4knvA
3qnmA Haloalkane dehalogenase family member from bacteroides thetaiotaomicron of unknown function
27% identity, 98% coverage: 3:260/262 of query aligns to 4:231/231 of 3qnmA
3vayA Crystal structure of 2-haloacid dehalogenase from pseudomonas syringae pv. Tomato dc3000 (see paper)
28% identity, 100% coverage: 1:261/262 of query aligns to 1:228/230 of 3vayA
4ygrA Crystal structure of had phosphatase from thermococcus onnurineus (see paper)
37% identity, 48% coverage: 133:259/262 of query aligns to 87:210/215 of 4ygrA
Sites not aligning to the query:
3i76B The crystal structure of the orthorhombic form of the putative had- hydrolase yfnb from bacillus subtilis bound to magnesium reveals interdomain movement
29% identity, 61% coverage: 101:259/262 of query aligns to 70:226/229 of 3i76B
Sites not aligning to the query:
8bp1A Crystal structure of bhmehis1.0, an engineered enzyme for the morita- baylis-hillman reaction (see paper)
26% identity, 89% coverage: 1:234/262 of query aligns to 1:201/231 of 8bp1A
6q7oA Crystal structure of oe1 (see paper)
32% identity, 39% coverage: 133:234/262 of query aligns to 101:201/230 of 6q7oA
Sites not aligning to the query:
6q7nA Crystal structure of bh32 alkylated with the mechanistic inhibitor 2- bromoacetophenone (see paper)
32% identity, 39% coverage: 133:234/262 of query aligns to 101:201/230 of 6q7nA
Sites not aligning to the query:
8ywoA Crystal structure of l-azetidine-2-carboxylate hydrolase soaked in (s)-azetidine-2-carboxylic acid
31% identity, 44% coverage: 121:234/262 of query aligns to 89:201/240 of 8ywoA
Sites not aligning to the query:
4o8cB Structure of the h170y mutant of thermostable p-nitrophenylphosphatase from bacillus stearothermophilus (see paper)
38% identity, 18% coverage: 187:233/262 of query aligns to 180:226/255 of 4o8cB
Sites not aligning to the query:
>WP_078427057.1 NCBI__GCF_002019605.1:WP_078427057.1
MLKAVIFDLDDTLLWDKKSVAESFKATCQVAVDKYGVDIHHFEEAVREAARQLYSNYETY
EFTKMIGINPFEGLWGNFGDKINVNFRKMKEIVPQYRTDAWTAGLKALGIDDPAFGAELG
ELFAKKRRTLPFIYEDTFTLLEELKKDYQLLLLTNGSPELQNEKLDMTPELVPYFDHIII
SGAFGRGKPDPAIFEHCLYLTELTKDQAVMVGDNLHTDIIGSNRIGMKNVWINRDDKDIV
DDIYPTHTIKELSELPKLLQKI
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory