Comparing WP_078427103.1 NCBI__GCF_002019605.1:WP_078427103.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
37% identity, 94% coverage: 1:479/509 of query aligns to 1:473/501 of P04983
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
34% identity, 45% coverage: 4:232/509 of query aligns to 1:223/240 of 4ymuJ
3c4jA Abc protein artp in complex with atp-gamma-s
33% identity, 45% coverage: 4:232/509 of query aligns to 3:225/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
33% identity, 45% coverage: 4:232/509 of query aligns to 3:225/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
33% identity, 45% coverage: 4:232/509 of query aligns to 3:225/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
33% identity, 45% coverage: 4:232/509 of query aligns to 3:225/242 of 2oljA
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
31% identity, 41% coverage: 4:213/509 of query aligns to 2:209/241 of 4u00A
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
31% identity, 48% coverage: 4:248/509 of query aligns to 1:252/343 of P30750
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
30% identity, 48% coverage: 3:248/509 of query aligns to 1:253/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
30% identity, 48% coverage: 3:248/509 of query aligns to 1:253/344 of 3tuiC
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
30% identity, 48% coverage: 3:248/509 of query aligns to 1:253/344 of 6cvlD
7e7oA Cryo-em structure of human abca4 in nrpe-bound state (see paper)
30% identity, 39% coverage: 18:217/509 of query aligns to 823:1016/2003 of 7e7oA
Sites not aligning to the query:
7lkpA Structure of atp-free human abca4 (see paper)
29% identity, 40% coverage: 12:217/509 of query aligns to 732:940/1941 of 7lkpA
Sites not aligning to the query:
8f5bA Human abca4 structure in complex with amp-pnp (see paper)
30% identity, 40% coverage: 16:217/509 of query aligns to 734:929/1924 of 8f5bA
Sites not aligning to the query:
P78363 Retinal-specific phospholipid-transporting ATPase ABCA4; ATP-binding cassette sub-family A member 4; RIM ABC transporter; RIM proteinv; RmP; Retinal-specific ATP-binding cassette transporter; Stargardt disease protein; EC 7.6.2.1 from Homo sapiens (Human) (see 43 papers)
30% identity, 40% coverage: 16:217/509 of query aligns to 942:1137/2273 of P78363