SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing WP_078717499.1 NCBI__GCF_900167125.1:WP_078717499.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

P26276 Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 10 papers)
46% identity, 96% coverage: 7:451/464 of query aligns to 12:447/463 of P26276

query
sites
P26276

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R15 (= R10) mutation to A: KM halves, decreases processivity as dissociation of G1,6P intermediate increases 25-fold.
Y17 (= Y12) binding alpha-D-glucose 1-phosphate; binding alpha-D-mannose 1-phosphate
R20 (= R15) mutation to A: No phosphoglucomutase activity.
S108 (= S103) binding via phosphate group; modified: Phosphoserine; mutation S->A,V: About 5% activity, still subject to substrate inhibition and requires G1,6P as an activator; phosphorylation occurs at a different site.; mutation to C: KM for G1P unchanged, kcat decreases 24-fold; G1,6P stimulates reaction by 2-3 orders of magnitude. No stable protein phosphorylation detected, altered ligation of metal residue.
N110 (= N105) mutation to A: KM halves, decreases processivity as dissociation of G1,6P intermediate increases 30-fold.
D242 (= D247) binding Mg(2+)
D244 (= D249) binding Mg(2+)
D246 (= D251) binding Mg(2+)
R247 (= R252) mutation to A: Small reduction in KM, small increase in dissociation of G1,6P intermediate.
R262 (= R267) mutation to A: Increases KM 2-fold, decreases kcat 9-fold for G1P. Alters flexibility of the hinge region.
K285 (= K290) binding alpha-D-glucose 1-phosphate
H308 (= H313) binding alpha-D-glucose 1-phosphate; binding alpha-D-mannose 1-phosphate
E325 (= E330) mutation to A: Reduces KM and Vmax approximately 2-fold.
EMSGH 325:329 (≠ ELSGH 330:334) binding alpha-D-glucose 1-phosphate; binding alpha-D-mannose 1-phosphate
H329 (= H334) mutation to A: No phosphoglucomutase activity using G1P as substrate, protein is less easily phosphorylated, no significant change in structure.
P368 (≠ S373) mutation to G: Increases KM 2-fold, decreases kcat 6-fold for G1P. Alters flexibility of the hinge region, structure is less compact.
R421 (= R425) mutation to C: Loss of phosphomannomutase activity, very low phosphoglucomutase activity.
RASNT 421:425 (= RASNT 425:429) binding alpha-D-glucose 1-phosphate; binding alpha-D-mannose 1-phosphate

Sites not aligning to the query:

1 modified: Initiator methionine, Removed

Q02E40 Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
46% identity, 96% coverage: 7:451/464 of query aligns to 12:447/463 of Q02E40

query
sites
Q02E40

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S108 (= S103) active site, Non-phosphorylated intermediate; modified: Phosphoserine

2h5aX Complex of the enzyme pmm/pgm with xylose 1-phosphate (see paper)
46% identity, 96% coverage: 7:451/464 of query aligns to 4:439/455 of 2h5aX

query
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2h5aX

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E

E

Q

T

G

G

A

A

A

L

L

L

A

A

G

G

E
|
E

L

M

S
|
S

G

G

H
|
H

I

V

F

F

G

K

Q

E

G

R

F

W

F

F

G

G

W

F

D
|
D

D

D

A

G

A

I

Y

Y

A

S

A

A

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

S

R

Q

S

D

S

Q

R

R

P

D

V

S

S

E

R

H

M

V

L

F

E

S

D

A

W

F

S

P

P

S

A

D

E

I

S

S

T

T

P

P

E

E

I

I

R

N

I

I

P

T

C

V

P

T

D

E

E

D

H

S

K

K

F

F

E

A

V

I

R

E

R

A

V

L

Q

Q

K

R

D

D

L

A

E

Q

-

W

K

G

Q

E

H

G

R

N

I

I

I

T

D

T

V

L

D

D

G

G

V

V

R

R

V

V

L

D

H

Y

P

P

G

K

G

G

W

W

G

G

L

L

V

V

R
|
R

A

A

S
|
S

N
|
N

T
|
T

Q

T

P

P

E

V

L

L

T

V

L

L

R

R

F

F

E

E

A

A

A

D

T

T

R

E

T

E

Q

E

L

L

E

E

E

R

L

I

R

K

T

T

V

V

active site: H101 (= H104), D234 (= D247), D236 (= D249), D238 (= D251), R239 (= R252), D332 (= D345)
binding 1-O-phosphono-alpha-D-xylopyranose: Y9 (= Y12), T298 (= T311), G299 (= G312), H300 (= H313), E317 (= E330), S319 (= S332), H321 (= H334), R413 (= R425), S415 (= S427), N416 (= N428), T417 (= T429)
binding zinc ion: S100 (= S103), D234 (= D247), D236 (= D249), D238 (= D251)

2h4lX Complex of pmm/pgm with ribose 1-phosphate (see paper)
46% identity, 96% coverage: 7:451/464 of query aligns to 4:439/455 of 2h4lX

query
sites
2h4lX

A

S

V

I

F

F

R

R

A

A

Y
|
Y

D

D

I

I

R
|
R

G

G

V

V

G

G

V

D

D

T

F

L

T

T

A

A

S

E

W

T

M

A

E

Y

R

W

L

I

G

G

R

R

A

A

F

I

G

G

T

S

W

E

L

S

S

L

E

A

R

R

G

G

L

E

G

P

R

C

V

V

V

A

L

V

G

G

R

R

D

D

G

G

R

R

A

L

S

S

S

G

P

P

E

E

Y

L

Q

V

L

K

A

Q

M

L

A

I

R

Q

G

G

L

L

L

V

A

D

T

C

G

G

R

C

D

Q

V

V

L

S

L

D

G

V

G

G

C

M

M

V

A

P

T

T

P

P

V

V

L

L

Y

Y

H

Y

A

A

V

A

H

N

S

V

L

L

G

E

T

G

R

K

A

S

G

G

G

V

M

M

V

L

T

T

A

G

S
|
S

H
|
H

N

N

P

P

E

D

Y

Y

N

N

G

G

C

F

K

K

L

I

W

V

G

V

G

A

D

G

T

E

V

T

L

L

S

A

P

N

E

E

E

Q

I

I

Q

Q

E

A

V

L

R

R

Y

E

I

R

F

I

E

E

R

K

G

N

V

D

F

L

A

A

V

S

G

G

R

V

G

G

V

S

L

V

G

E

S

Q

H

V

D

D

P

I

I

L

P

P

S

R

W

Y

L

F

E

K

E

Q

V

-

A

-

G

-

L

-

E

-

R

-

I

I

Q

R

P

D

A

I

N

A

G

M

A

A

K

K

P

P

L

M

H

K

I

V

V

V

D

D

G

C

G

G

N

N

G

G

P

V

A

A

G

G

T

V

L

I

T

A

A

P

D

Q

L

L

L

I

E

E

R

A

A

L

G

G

A

C

E

S

A

-

G

-

I

-

R

-

V

V

E

I

R

P

L

L

F

Y

C

C

D

E

V

V

D

D

P

G

A

N

F

F

P

P

N

N

H

H

P

P

D

D

P

P

V

G

V

K

E

P

E

E

N

N

M

L

R

K

Q

D

L

L

Q

I

E

A

R

K

V

V

K

K

T

A

V

E

G

N

A

A

D

D

L

L

G

G

L

L

G

A

L

F

D
|
D

G

G

D
|
D

G

G

D
|
D

R
|
R

L

V

G

G

V

V

D

T

E

N

T

T

G

G

E

T

L

I

W

I

P

Y

G

P

D

D

R

R

L

L

A

M

L

L

F

F

A

A

R

K

D

D

V

V

L

V

T

S

R

R

V

N

P

P

G

G

A

A

R

D

I

I

A

F

D

D

V

V

K

K

C

C

S

T

Q

R

R

R

L

L

F

I

D

A

D

L

I

I

E

S

T

G

H

Y

G

G

E

R

A

P

V

V

M

M

G

W

V

K

T
|
T

G

G

H

H

S

S

I

L

M

I

K

K

R

K

A

K

L

M

R

K

E

E

Q

T

G

G

A

A

A

L

L

L

A

A

G

G

E
|
E

L

M

S

S

G

G

H

H

I

V

F

F

G

K

Q

E

G

R

F

W

F

F

G

G

W

F

D
|
D

D

D

A

G

A

I

Y

Y

A

S

A

A

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

S

R

Q

S

D

S

Q

R

R

P

D

V

S

S

E

R

H

M

V

L

F

E

S

D

A

W

F

S

P

P

S

A

D

E

I

S

S

T

T

P

P

E

E

I

I

R

N

I

I

P

T

C

V

P

T

D

E

E

D

H

S

K

K

F

F

E

A

V

I

R

E

R

A

V

L

Q

Q

K

R

D

D

L

A

E

Q

-

W

K

G

Q

E

H

G

R

N

I

I

I

T

D

T

V

L

D

D

G

G

V

V

R

R

V

V

L

D

H

Y

P

P

G

K

G

G

W

W

G

G

L

L

V

V

R
|
R

A

A

S
|
S

N
|
N

T
|
T

Q

T

P

P

E

V

L

L

T

V

L

L

R

R

F

F

E

E

A

A

A

D

T

T

R

E

T

E

Q

E

L

L

E

E

E

R

L

I

R

K

T

T

V

V

active site: H101 (= H104), D234 (= D247), D236 (= D249), D238 (= D251), R239 (= R252), D332 (= D345)
binding 1-O-phosphono-alpha-D-ribofuranose: Y9 (= Y12), R12 (= R15), S100 (= S103), T298 (= T311), E317 (= E330), R413 (= R425), S415 (= S427), N416 (= N428), T417 (= T429)
binding zinc ion: S100 (= S103), D234 (= D247), D236 (= D249), D238 (= D251)

2fkfA Phosphomannomutase/phosphoglucomutase from pseudomonas aeruginosa with alpha-d-glucose 1,6-bisphosphate bound (see paper)
46% identity, 96% coverage: 7:451/464 of query aligns to 4:439/455 of 2fkfA

query
sites
2fkfA

A

S

V

I

F

F

R
|
R

A

A

Y

Y

D

D

I

I

R
|
R

G

G

V

V

G

G

V

D

D

T

F

L

T

T

A

A

S

E

W

T

M

A

E

Y

R

W

L

I

G

G

R

R

A

A

F

I

G

G

T

S

W

E

L

S

S

L

E

A

R

R

G

G

L

E

G

P

R

C

V

V

V

A

L

V

G

G

R

R

D

D

G

G

R

R

A

L

S

S

S

G

P

P

E

E

Y

L

Q

V

L

K

A

Q

M

L

A

I

R

Q

G

G

L

L

L

V

A

D

T

C

G

G

R

C

D

Q

V

V

L

S

L

D

G

V

G

G

C

M

M

V

A

P

T

T

P

P

V

V

L

L

Y

Y

H

Y

A

A

V

A

H

N

S

V

L

L

G

E

T

G

R

K

A

S

G

G

G

V

M

M

V

L

T

T

A

G

S
|
S

H
|
H

N

N

P

P

E

D

Y

Y

N

N

G

G

C

F

K
|
K

L

I

W

V

G

V

G

A

D

G

T

E

V

T

L

L

S

A

P

N

E

E

E

Q

I

I

Q

Q

E

A

V

L

R

R

Y

E

I

R

F

I

E

E

R

K

G

N

V

D

F

L

A

A

V

S

G

G

R

V

G

G

V

S

L

V

G

E

S

Q

H

V

D

D

P

I

I

L

P

P

S

R

W

Y

L

F

E

K

E

Q

V

-

A

-

G

-

L

-

E

-

R

-

I

I

Q

R

P

D

A

I

N

A

G

M

A

A

K

K

P

P

L

M

H

K

I

V

V

V

D

D

G

C

G

G

N

N

G

G

P

V

A

A

G

G

T

V

L

I

T

A

A

P

D

Q

L

L

L

I

E

E

R

A

A

L

G

G

A

C

E

S

A

-

G

-

I

-

R

-

V

V

E

I

R

P

L

L

F

Y

C

C

D

E

V

V

D

D

P

G

A

N

F

F

P

P

N

N

H

H

P

P

D

D

P

P

V

G

V

K

E

P

E

E

N

N

M

L

R

K

Q

D

L

L

Q

I

E

A

R

K

V

V

K

K

T

A

V

E

G

N

A

A

D

D

L

L

G

G

L

L

G

A

L

F

D
|
D

G

G

D
|
D

G

G

D
|
D

R
|
R

L

V

G

G

V

V

D

T

E

N

T

T

G

G

E

T

L

I

W

I

P

Y

G

P

D

D

R

R

L

L

A

M

L

L

F

F

A

A

R

K

D

D

V

V

L

V

T

S

R

R

V

N

P

P

G

G

A

A

R

D

I

I

A

F

D

D

V

V

K

K

C

C

S

T

Q

R

R

R

L

L

F

I

D

A

D

L

I

I

E

S

T

G

H

Y

G

G

E

R

A

P

V

V

M

M

G

W

V

K

T

T

G

G

H

H

S

S

I

L

M

I

K

K

R

K

A

K

L

M

R

K

E

E

Q

T

G

G

A

A

A

L

L

L

A

A

G

G

E

E

L

M

S
|
S

G

G

H
|
H

I

V

F

F

G

K

Q

E

G

R

F

W

F

F

G

G

W

F

D
|
D

D

D

A

G

A

I

Y

Y

A

S

A

A

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

S

R

Q

S

D

S

Q

R

R

P

D

V

S

S

E

R

H

M

V

L

F

E

S

D

A

W

F

S

P

P

S

A

D

E

I

S

S

T

T

P

P

E

E

I

I

R

N

I

I

P

T

C

V

P

T

D

E

E

D

H

S

K

K

F

F

E

A

V

I

R

E

R

A

V

L

Q

Q

K

R

D

D

L

A

E

Q

-

W

K

G

Q

E

H

G

R

N

I

I

I

T

D

T

V

L

D

D

G

G

V

V

R

R

V

V

L

D

H

Y

P

P

G

K

G

G

W

W

G

G

L

L

V

V

R
|
R

A

A

S
|
S

N
|
N

T
|
T

Q

T

P

P

E

V

L

L

T

V

L

L

R

R

F

F

E

E

A

A

A

D

T

T

R

E

T

E

Q

E

L

L

E

E

E

R

L

I

R

K

T

T

V

V

active site: R12 (= R15), S100 (= S103), H101 (= H104), K110 (= K113), D234 (= D247), D236 (= D249), D238 (= D251), R239 (= R252), H321 (= H334), D332 (= D345)
binding 1,6-di-O-phosphono-alpha-D-glucopyranose: R7 (= R10), H101 (= H104), S319 (= S332), R413 (= R425), S415 (= S427), N416 (= N428), T417 (= T429)
binding zinc ion: S100 (= S103), D234 (= D247), D236 (= D249), D238 (= D251)

1pcmX Enzyme-ligand complex of p. Aeruginosa pmm/pgm (see paper)
46% identity, 96% coverage: 7:451/464 of query aligns to 4:439/455 of 1pcmX

query
sites
1pcmX

A

S

V

I

F

F

R

R

A

A

Y
|
Y

D

D

I

I

R
|
R

G

G

V

V

G

G

V

D

D

T

F

L

T

T

A

A

S

E

W

T

M

A

E

Y

R

W

L

I

G

G

R

R

A

A

F

I

G

G

T

S

W

E

L

S

S

L

E

A

R

R

G

G

L

E

G

P

R

C

V

V

V

A

L

V

G

G

R

R

D

D

G

G

R

R

A

L

S

S

S

G

P

P

E

E

Y

L

Q

V

L

K

A

Q

M

L

A

I

R

Q

G

G

L

L

L

V

A

D

T

C

G

G

R

C

D

Q

V

V

L

S

L

D

G

V

G

G

C

M

M

V

A

P

T

T

P

P

V

V

L

L

Y

Y

H

Y

A

A

V

A

H

N

S

V

L

L

G

E

T

G

R

K

A

S

G

G

G

V

M

M

V

L

T

T

A

G

S
|
S

H
|
H

N

N

P

P

E

D

Y

Y

N

N

G

G

C

F

K
|
K

L

I

W

V

G

V

G

A

D

G

T

E

V

T

L

L

S

A

P

N

E

E

E

Q

I

I

Q

Q

E

A

V

L

R

R

Y

E

I

R

F

I

E

E

R

K

G

N

V

D

F

L

A

A

V

S

G

G

R

V

G

G

V

S

L

V

G

E

S

Q

H

V

D

D

P

I

I

L

P

P

S

R

W

Y

L

F

E

K

E

Q

V

-

A

-

G

-

L

-

E

-

R

-

I

I

Q

R

P

D

A

I

N

A

G

M

A

A

K

K

P

P

L

M

H

K

I

V

V

V

D

D

G

C

G

G

N

N

G

G

P

V

A

A

G

G

T

V

L

I

T

A

A

P

D

Q

L

L

L

I

E

E

R

A

A

L

G

G

A

C

E

S

A

-

G

-

I

-

R

-

V

V

E

I

R

P

L

L

F

Y

C

C

D

E

V

V

D

D

P

G

A

N

F

F

P

P

N

N

H

H

P

P

D

D

P

P

V

G

V

K

E

P

E

E

N

N

M

L

R

K

Q

D

L

L

Q

I

E

A

R

K

V

V

K

K

T

A

V

E

G

N

A

A

D

D

L

L

G

G

L

L

G

A

L

F

D
|
D

G

G

D
|
D

G

G

D
|
D

R
|
R

L

V

G

G

V

V

D

T

E

N

T

T

G

G

E

T

L

I

W

I

P

Y

G

P

D

D

R

R

L

L

A

M

L

L

F

F

A

A

R

K

D

D

V

V

L

V

T

S

R

R

V

N

P

P

G

G

A

A

R

D

I

I

A

F

D

D

V

V

K

K

C

C

S

T

Q

R

R

R

L

L

F

I

D

A

D

L

I

I

E

S

T

G

H

Y

G

G

E

R

A

P

V

V

M

M

G

W

V

K

T
|
T

G
|
G

H
|
H

S

S

I

L

M

I

K

K

R

K

A

K

L

M

R

K

E

E

Q

T

G

G

A

A

A

L

L

L

A

A

G

G

E
|
E

L

M

S
|
S

G

G

H
|
H

I

V

F

F

G

K

Q

E

G

R

F

W

F

F

G

G

W

F

D
|
D

D

D

A

G

A

I

Y

Y

A

S

A

A

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

S

R

Q

S

D

S

Q

R

R

P

D

V

S

S

E

R

H

M

V

L

F

E

S

D

A

W

F

S

P

P

S

A

D

E

I

S

S

T

T

P

P

E

E

I

I

R

N

I

I

P

T

C

V

P

T

D

E

E

D

H

S

K

K

F

F

E

A

V

I

R

E

R

A

V

L

Q

Q

K

R

D

D

L

A

E

Q

-

W

K

G

Q

E

H

G

R

N

I

I

I

T

D

T

V

L

D

D

G

G

V

V

R

R

V

V

L

D

H

Y

P

P

G

K

G

G

W

W

G

G

L

L

V

V

R
|
R

A

A

S
|
S

N

N

T

T

Q

T

P

P

E

V

L

L

T

V

L

L

R

R

F

F

E

E

A

A

A

D

T

T

R

E

T

E

Q

E

L

L

E

E

E

R

L

I

R

K

T

T

V

V

active site: R12 (= R15), S100 (= S103), H101 (= H104), K110 (= K113), D234 (= D247), D236 (= D249), D238 (= D251), R239 (= R252), H321 (= H334), D332 (= D345)
binding 6-O-phosphono-alpha-D-mannopyranose: Y9 (= Y12), S100 (= S103), T298 (= T311), G299 (= G312), H300 (= H313), E317 (= E330), S319 (= S332), H321 (= H334), R413 (= R425), S415 (= S427)
binding zinc ion: S100 (= S103), D234 (= D247), D236 (= D249), D238 (= D251)

1p5gX Enzyme-ligand complex of p. Aeruginosa pmm/pgm (see paper)
46% identity, 96% coverage: 7:451/464 of query aligns to 4:439/455 of 1p5gX

query
sites
1p5gX

A

S

V

I

F

F

R

R

A

A

Y
|
Y

D

D

I

I

R
|
R

G

G

V

V

G

G

V

D

D

T

F

L

T

T

A

A

S

E

W

T

M

A

E

Y

R

W

L

I

G

G

R

R

A

A

F

I

G

G

T

S

W

E

L

S

S

L

E

A

R

R

G

G

L

E

G

P

R

C

V

V

V

A

L

V

G

G

R

R

D

D

G

G

R

R

A

L

S

S

S

G

P

P

E

E

Y

L

Q

V

L

K

A

Q

M

L

A

I

R

Q

G

G

L

L

L

V

A

D

T

C

G

G

R

C

D

Q

V

V

L

S

L

D

G

V

G

G

C

M

M

V

A

P

T

T

P

P

V

V

L

L

Y

Y

H

Y

A

A

V

A

H

N

S

V

L

L

G

E

T

G

R

K

A

S

G

G

G

V

M

M

V

L

T

T

A

G

S
|
S

H
|
H

N

N

P

P

E

D

Y

Y

N

N

G

G

C

F

K
|
K

L

I

W

V

G

V

G

A

D

G

T

E

V

T

L

L

S

A

P

N

E

E

E

Q

I

I

Q

Q

E

A

V

L

R

R

Y

E

I

R

F

I

E

E

R

K

G

N

V

D

F

L

A

A

V

S

G

G

R

V

G

G

V

S

L

V

G

E

S

Q

H

V

D

D

P

I

I

L

P

P

S

R

W

Y

L

F

E

K

E

Q

V

-

A

-

G

-

L

-

E

-

R

-

I

I

Q

R

P

D

A

I

N

A

G

M

A

A

K

K

P

P

L

M

H

K

I

V

V

V

D

D

G

C

G

G

N

N

G

G

P

V

A

A

G

G

T

V

L

I

T

A

A

P

D

Q

L

L

L

I

E

E

R

A

A

L

G

G

A

C

E

S

A

-

G

-

I

-

R

-

V

V

E

I

R

P

L

L

F

Y

C

C

D

E

V

V

D

D

P

G

A

N

F

F

P

P

N

N

H

H

P

P

D

D

P

P

V

G

V

K

E

P

E

E

N

N

M

L

R

K

Q

D

L

L

Q

I

E

A

R

K

V

V

K

K

T

A

V

E

G

N

A

A

D

D

L

L

G

G

L

L

G

A

L

F

D
|
D

G

G

D
|
D

G

G

D
|
D

R
|
R

L

V

G

G

V

V

D

T

E

N

T

T

G

G

E

T

L

I

W

I

P

Y

G

P

D

D

R

R

L

L

A

M

L

L

F

F

A

A

R

K

D

D

V

V

L

V

T

S

R

R

V

N

P

P

G

G

A

A

R

D

I

I

A

F

D

D

V

V

K
|
K

C

C

S

T

Q

R

R

R

L

L

F

I

D

A

D

L

I

I

E

S

T

G

H

Y

G

G

E

R

A

P

V

V

M

M

G

W

V

K

T

T

G
|
G

H
|
H

S

S

I

L

M

I

K

K

R

K

A

K

L

M

R

K

E

E

Q

T

G

G

A

A

A

L

L

L

A

A

G

G

E
|
E

L

M

S
|
S

G

G

H
|
H

I

V

F

F

G

K

Q

E

G

R

F

W

F

F

G

G

W

F

D
|
D

D

D

A

G

A

I

Y

Y

A

S

A

A

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

S

R

Q

S

D

S

Q

R

R

P

D

V

S

S

E

R

H

M

V

L

F

E

S

D

A

W

F

S

P

P

S

A

D

E

I

S

S

T

T

P

P

E

E

I

I

R

N

I

I

P

T

C

V

P

T

D

E

E

D

H

S

K

K

F

F

E

A

V

I

R

E

R

A

V

L

Q

Q

K

R

D

D

L

A

E

Q

-

W

K

G

Q

E

H

G

R

N

I

I

I

T

D

T

V

L

D

D

G

G

V

V

R

R

V

V

L

D

H

Y

P

P

G

K

G

G

W

W

G

G

L

L

V

V

R
|
R

A

A

S
|
S

N
|
N

T
|
T

Q

T

P

P

E

V

L

L

T

V

L

L

R

R

F

F

E

E

A

A

A

D

T

T

R

E

T

E

Q

E

L

L

E

E

E

R

L

I

R

K

T

T

V

V

active site: R12 (= R15), S100 (= S103), H101 (= H104), K110 (= K113), D234 (= D247), D236 (= D249), D238 (= D251), R239 (= R252), H321 (= H334), D332 (= D345)
binding 6-O-phosphono-alpha-D-glucopyranose: Y9 (= Y12), S100 (= S103), K277 (= K290), G299 (= G312), H300 (= H313), E317 (= E330), S319 (= S332), H321 (= H334), R413 (= R425), S415 (= S427), N416 (= N428), T417 (= T429)
binding zinc ion: S100 (= S103), D234 (= D247), D236 (= D249), D238 (= D251)

1p5dX Enzyme-ligand complex of p. Aeruginosa pmm/pgm (see paper)
46% identity, 96% coverage: 7:451/464 of query aligns to 4:439/455 of 1p5dX

query
sites
1p5dX

A

S

V

I

F

F

R

R

A

A

Y
|
Y

D

D

I

I

R
|
R

G

G

V

V

G

G

V

D

D

T

F

L

T

T

A

A

S

E

W

T

M

A

E

Y

R

W

L

I

G

G

R

R

A

A

F

I

G

G

T

S

W

E

L

S

S

L

E

A

R

R

G

G

L

E

G

P

R

C

V

V

V

A

L

V

G

G

R

R

D

D

G

G

R

R

A

L

S

S

S

G

P

P

E

E

Y

L

Q

V

L

K

A

Q

M

L

A

I

R

Q

G

G

L

L

L

V

A

D

T

C

G

G

R

C

D

Q

V

V

L

S

L

D

G

V

G

G

C

M

M

V

A

P

T

T

P

P

V

V

L

L

Y

Y

H

Y

A

A

V

A

H

N

S

V

L

L

G

E

T

G

R

K

A

S

G

G

G

V

M

M

V

L

T

T

A

G

S
|
S

H
|
H

N

N

P

P

E

D

Y

Y

N

N

G

G

C

F

K
|
K

L

I

W

V

G

V

G

A

D

G

T

E

V

T

L

L

S

A

P

N

E

E

E

Q

I

I

Q

Q

E

A

V

L

R

R

Y

E

I

R

F

I

E

E

R

K

G

N

V

D

F

L

A

A

V

S

G

G

R

V

G

G

V

S

L

V

G

E

S

Q

H

V

D

D

P

I

I

L

P

P

S

R

W

Y

L

F

E

K

E

Q

V

-

A

-

G

-

L

-

E

-

R

-

I

I

Q

R

P

D

A

I

N

A

G

M

A

A

K

K

P

P

L

M

H

K

I

V

V

V

D

D

G

C

G

G

N

N

G

G

P

V

A

A

G

G

T

V

L

I

T

A

A

P

D

Q

L

L

L

I

E

E

R

A

A

L

G

G

A

C

E

S

A

-

G

-

I

-

R

-

V

V

E

I

R

P

L

L

F

Y

C

C

D

E

V

V

D

D

P

G

A

N

F

F

P

P

N

N

H

H

P

P

D

D

P

P

V

G

V

K

E

P

E

E

N

N

M

L

R

K

Q

D

L

L

Q

I

E

A

R

K

V

V

K

K

T

A

V

E

G

N

A

A

D

D

L

L

G

G

L

L

G

A

L

F

D
|
D

G

G

D
|
D

G

G

D
|
D

R
|
R

L

V

G

G

V

V

D

T

E

N

T

T

G

G

E

T

L

I

W

I

P

Y

G

P

D

D

R

R

L

L

A

M

L

L

F

F

A

A

R

K

D

D

V

V

L

V

T

S

R

R

V

N

P

P

G

G

A

A

R

D

I

I

A

F

D

D

V

V

K

K

C

C

S

T

Q

R

R

R

L

L

F

I

D

A

D

L

I

I

E

S

T

G

H

Y

G

G

E

R

A

P

V

V

M

M

G

W

V

K

T
|
T

G
|
G

H
|
H

S

S

I

L

M

I

K

K

R

K

A

K

L

M

R

K

E

E

Q

T

G

G

A

A

A

L

L

L

A

A

G

G

E
|
E

L

M

S
|
S

G

G

H
|
H

I

V

F

F

G

K

Q

E

G

R

F

W

F

F

G

G

W

F

D
|
D

D

D

A

G

A

I

Y

Y

A

S

A

A

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

S

R

Q

S

D

S

Q

R

R

P

D

V

S

S

E

R

H

M

V

L

F

E

S

D

A

W

F

S

P

P

S

A

D

E

I

S

S

T

T

P

P

E

E

I

I

R

N

I

I

P

T

C

V

P

T

D

E

E

D

H

S

K

K

F

F

E

A

V

I

R

E

R

A

V

L

Q

Q

K

R

D

D

L

A

E

Q

-

W

K

G

Q

E

H

G

R

N

I

I

I

T

D

T

V

L

D

D

G

G

V

V

R

R

V

V

L

D

H

Y

P

P

G

K

G

G

W

W

G

G

L

L

V

V

R
|
R

A

A

S
|
S

N

N

T
|
T

Q

T

P

P

E

V

L

L

T

V

L

L

R

R

F

F

E

E

A

A

A

D

T

T

R

E

T

E

Q

E

L

L

E

E

E

R

L

I

R

K

T

T

V

V

active site: R12 (= R15), S100 (= S103), H101 (= H104), K110 (= K113), D234 (= D247), D236 (= D249), D238 (= D251), R239 (= R252), H321 (= H334), D332 (= D345)
binding 1-O-phosphono-alpha-D-glucopyranose: Y9 (= Y12), S100 (= S103), R239 (= R252), T298 (= T311), G299 (= G312), H300 (= H313), E317 (= E330), S319 (= S332), H321 (= H334), R413 (= R425), S415 (= S427), T417 (= T429)
binding zinc ion: S100 (= S103), D234 (= D247), D236 (= D249), D238 (= D251)

1pcjX Enzyme-ligand complex of p. Aeruginosa pmm/pgm (see paper)
46% identity, 96% coverage: 7:451/464 of query aligns to 7:442/458 of 1pcjX

query
sites
1pcjX

A

S

V

I

F

F

R

R

A

A

Y
|
Y

D

D

I

I

R
|
R

G

G

V

V

G

G

V

D

D

T

F

L

T

T

A

A

S

E

W

T

M

A

E

Y

R

W

L

I

G

G

R

R

A

A

F

I

G

G

T

S

W

E

L

S

S

L

E

A

R

R

G

G

L

E

G

P

R

C

V

V

V

A

L

V

G

G

R

R

D

D

G

G

R

R

A

L

S

S

S

G

P

P

E

E

Y

L

Q

V

L

K

A

Q

M

L

A

I

R

Q

G

G

L

L

L

V

A

D

T

C

G

G

R

C

D

Q

V

V

L

S

L

D

G

V

G

G

C

M

M

V

A

P

T

T

P

P

V

V

L

L

Y

Y

H

Y

A

A

V

A

H

N

S

V

L

L

G

E

T

G

R

K

A

S

G

G

G

V

M

M

V

L

T

T

A

G

S
|
S

H
|
H

N

N

P

P

E

D

Y

Y

N

N

G

G

C

F

K
|
K

L

I

W

V

G

V

G

A

D

G

T

E

V

T

L

L

S

A

P

N

E

E

E

Q

I

I

Q

Q

E

A

V

L

R

R

Y

E

I

R

F

I

E

E

R

K

G

N

V

D

F

L

A

A

V

S

G

G

R

V

G

G

V

S

L

V

G

E

S

Q

H

V

D

D

P

I

I

L

P

P

S

R

W

Y

L

F

E

K

E

Q

V

-

A

-

G

-

L

-

E

-

R

-

I

I

Q

R

P

D

A

I

N

A

G

M

A

A

K

K

P

P

L

M

H

K

I

V

V

V

D

D

G

C

G

G

N

N

G

G

P

V

A

A

G

G

T

V

L

I

T

A

A

P

D

Q

L

L

L

I

E

E

R

A

A

L

G

G

A

C

E

S

A

-

G

-

I

-

R

-

V

V

E

I

R

P

L

L

F

Y

C

C

D

E

V

V

D

D

P

G

A

N

F

F

P

P

N

N

H

H

P

P

D

D

P

P

V

G

V

K

E

P

E

E

N

N

M

L

R

K

Q

D

L

L

Q

I

E

A

R

K

V

V

K

K

T

A

V

E

G

N

A

A

D

D

L

L

G

G

L

L

G

A

L

F

D
|
D

G

G

D
|
D

G

G

D
|
D

R
|
R

L

V

G

G

V

V

D

T

E

N

T

T

G

G

E

T

L

I

W

I

P

Y

G

P

D

D

R

R

L

L

A

M

L

L

F

F

A

A

R

K

D

D

V

V

L

V

T

S

R

R

V

N

P

P

G

G

A

A

R

D

I

I

A

F

D

D

V

V

K

K

C

C

S

T

Q

R

R

R

L

L

F

I

D

A

D

L

I

I

E

S

T

G

H

Y

G

G

E

R

A

P

V

V

M

M

G

W

V

K

T
|
T

G
|
G

H

H

S

S

I

L

M

I

K

K

R

K

A

K

L

M

R

K

E

E

Q

T

G

G

A

A

A

L

L

L

A

A

G

G

E
|
E

L

M

S
|
S

G

G

H
|
H

I

V

F

F

G

K

Q

E

G

R

F

W

F

F

G

G

W

F

D
|
D

D

D

A

G

A

I

Y

Y

A

S

A

A

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

S

R

Q

S

D

S

Q

R

R

P

D

V

S

S

E

R

H

M

V

L

F

E

S

D

A

W

F

S

P

P

S

A

D

E

I

S

S

T

T

P

P

E

E

I

I

R

N

I

I

P

T

C

V

P

T

D

E

E

D

H

S

K

K

F

F

E

A

V

I

R

E

R

A

V

L

Q

Q

K

R

D

D

L

A

E

Q

-

W

K

G

Q

E

H

G

R

N

I

I

I

T

D

T

V

L

D

D

G

G

V

V

R

R

V

V

L

D

H

Y

P

P

G

K

G

G

W

W

G

G

L

L

V

V

R
|
R

A

A

S
|
S

N
|
N

T
|
T

Q

T

P

P

E

V

L

L

T

V

L

L

R

R

F

F

E

E

A

A

A

D

T

T

R

E

T

E

Q

E

L

L

E

E

E

R

L

I

R

K

T

T

V

V

active site: R15 (= R15), S103 (= S103), H104 (= H104), K113 (= K113), D237 (= D247), D239 (= D249), D241 (= D251), R242 (= R252), H324 (= H334), D335 (= D345)
binding 1-O-phosphono-alpha-D-mannopyranose: Y12 (= Y12), S103 (= S103), T301 (= T311), G302 (= G312), E320 (= E330), S322 (= S332), H324 (= H334), R416 (= R425), S418 (= S427), N419 (= N428), T420 (= T429)
binding zinc ion: S103 (= S103), D237 (= D247), D239 (= D249), D241 (= D251)

1k2yX Crystal structure of phosphomannomutase/phosphoglucomutase s108a mutant from p. Aeruginosa (see paper)
46% identity, 96% coverage: 7:451/464 of query aligns to 8:443/459 of 1k2yX

query
sites
1k2yX

A

S

V

I

F

F

R

R

A

A

Y

Y

D

D

I

I

R

R

G

G

V

V

G

G

V

D

D

T

F

L

T

T

A

A

S

E

W

T

M

A

E

Y

R

W

L

I

G

G

R

R

A

A

F

I

G

G

T

S

W

E

L

S

S

L

E

A

R

R

G

G

L

E

G

P

R

C

V

V

V

A

L

V

G

G

R

R

D

D

G

G

R

R

A

L

S

S

S

G

P

P

E

E

Y

L

Q

V

L

K

A

Q

M

L

A

I

R

Q

G

G

L

L

L

V

A

D

T

C

G

G

R

C

D

Q

V

V

L

S

L

D

G

V

G

G

C

M

M

V

A

P

T

T

P

P

V

V

L

L

Y

Y

H

Y

A

A

V

A

H

N

S

V

L

L

G

E

T

G

R

K

A

S

G

G

G

V

M

M

V

L

T

T

A

G

S

A

H
|
H

N

N

P

P

E

D

Y

Y

N

N

G

G

C

F

K

K

L

I

W

V

G

V

G

A

D

G

T

E

V

T

L

L

S

A

P

N

E

E

E

Q

I

I

Q

Q

E

A

V

L

R

R

Y

E

I

R

F

I

E

E

R

K

G

N

V

D

F

L

A

A

V

S

G

G

R

V

G

G

V

S

L

V

G

E

S

Q

H

V

D

D

P

I

I

L

P

P

S

R

W

Y

L

F

E

K

E

Q

V

-

A

-

G

-

L

-

E

-

R

-

I

I

Q

R

P

D

A

I

N

A

G

M

A

A

K

K

P

P

L

M

H

K

I

V

V

V

D

D

G

C

G

G

N

N

G

G

P

V

A

A

G

G

T

V

L

I

T

A

A

P

D

Q

L

L

L

I

E

E

R

A

A

L

G

G

A

C

E

S

A

-

G

-

I

-

R

-

V

V

E

I

R

P

L

L

F

Y

C

C

D

E

V

V

D

D

P

G

A

N

F

F

P

P

N

N

H

H

P

P

D

D

P

P

V

G

V

K

E

P

E

E

N

N

M

L

R

K

Q

D

L

L

Q

I

E

A

R

K

V

V

K

K

T

A

V

E

G

N

A

A

D

D

L

L

G

G

L

L

G

A

L

F

D
|
D

G

G

D
|
D

G

G

D
|
D

R
|
R

L

V

G

G

V

V

D

T

E

N

T

T

G

G

E

T

L

I

W

I

P

Y

G

P

D

D

R

R

L

L

A

M

L

L

F

F

A

A

R

K

D

D

V

V

L

V

T

S

R

R

V

N

P

P

G

G

A

A

R

D

I

I

A

F

D

D

V

V

K

K

C

C

S

T

Q

R

R

R

L

L

F

I

D

A

D

L

I

I

E

S

T

G

H

Y

G

G

E

R

A

P

V

V

M

M

G

W

V

K

T

T

G

G

H

H

S

S

I

L

M

I

K

K

R

K

A

K

L

M

R

K

E

E

Q

T

G

G

A

A

A

L

L

L

A

A

G

G

E

E

L

M

S

S

G

G

H

H

I

V

F

F

G

K

Q

E

G

R

F

W

F

F

G

G

W

F

D
|
D

D

D

A

G

A

I

Y

Y

A

S

A

A

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

S

R

Q

S

D

S

Q

R

R

P

D

V

S

S

E

R

H

M

V

L

F

E

S

D

A

W

F

S

P

P

S

A

D

E

I

S

S

T

T

P

P

E

E

I

I

R

N

I

I

P

T

C

V

P

T

D

E

E

D

H

S

K

K

F

F

E

A

V

I

R

E

R

A

V

L

Q

Q

K

R

D

D

L

A

E

Q

-

W

K

G

Q

E

H

G

R

N

I

I

I

T

D

T

V

L

D

D

G

G

V

V

R

R

V

V

L

D

H

Y

P

P

G

K

G

G

W

W

G

G

L

L

V

V

R

R

A

A

S

S

N

N

T

T

Q

T

P

P

E

V

L

L

T

V

L

L

R

R

F

F

E

E

A

A

A

D

T

T

R

E

T

E

Q

E

L

L

E

E

E

R

L

I

R

K

T

T

V

V

active site: H105 (= H104), D238 (= D247), D240 (= D249), D242 (= D251), R243 (= R252), D336 (= D345)
binding zinc ion: D238 (= D247), D240 (= D249), D242 (= D251)

4il8A Crystal structure of an h329a mutant of p. Aeruginosa pmm/pgm (see paper)
46% identity, 96% coverage: 7:451/464 of query aligns to 8:443/459 of 4il8A

query
sites
4il8A

A

S

V

I

F

F

R

R

A

A

Y

Y

D

D

I

I

R
|
R

G

G

V

V

G

G

V

D

D

T

F

L

T

T

A

A

S

E

W

T

M

A

E

Y

R

W

L

I

G

G

R

R

A

A

F

I

G

G

T

S

W

E

L

S

S

L

E

A

R

R

G

G

L

E

G

P

R

C

V

V

V

A

L

V

G

G

R

R

D

D

G

G

R

R

A

L

S

S

S

G

P

P

E

E

Y

L

Q

V

L

K

A

Q

M

L

A

I

R

Q

G

G

L

L

L

V

A

D

T

C

G

G

R

C

D

Q

V

V

L

S

L

D

G

V

G

G

C

M

M

V

A

P

T

T

P

P

V

V

L

L

Y

Y

H

Y

A

A

V

A

H

N

S

V

L

L

G

E

T

G

R

K

A

S

G

G

G

V

M

M

V

L

T

T

A

G

S
|
S

H
|
H

N

N

P

P

E

D

Y

Y

N

N

G

G

C

F

K
|
K

L

I

W

V

G

V

G

A

D

G

T

E

V

T

L

L

S

A

P

N

E

E

E

Q

I

I

Q

Q

E

A

V

L

R

R

Y

E

I

R

F

I

E

E

R

K

G

N

V

D

F

L

A

A

V

S

G

G

R

V

G

G

V

S

L

V

G

E

S

Q

H

V

D

D

P

I

I

L

P

P

S

R

W

Y

L

F

E

K

E

Q

V

-

A

-

G

-

L

-

E

-

R

-

I

I

Q

R

P

D

A

I

N

A

G

M

A

A

K

K

P

P

L

M

H

K

I

V

V

V

D

D

G

C

G

G

N

N

G

G

P

V

A

A

G

G

T

V

L

I

T

A

A

P

D

Q

L

L

L

I

E

E

R

A

A

L

G

G

A

C

E

S

A

-

G

-

I

-

R

-

V

V

E

I

R

P

L

L

F

Y

C

C

D

E

V

V

D

D

P

G

A

N

F

F

P

P

N

N

H

H

P

P

D

D

P

P

V

G

V

K

E

P

E

E

N

N

M

L

R

K

Q

D

L

L

Q

I

E

A

R

K

V

V

K

K

T

A

V

E

G

N

A

A

D

D

L

L

G

G

L

L

G

A

L

F

D
|
D

G

G

D
|
D

G

G

D
|
D

R
|
R

L

V

G

G

V

V

D

T

E

N

T

T

G

G

E

T

L

I

W

I

P

Y

G

P

D

D

R

R

L

L

A

M

L

L

F

F

A

A

R

K

D

D

V

V

L

V

T

S

R

R

V

N

P

P

G

G

A

A

R

D

I

I

A

F

D

D

V

V

K

K

C

C

S

T

Q

R

R

R

L

L

F

I

D

A

D

L

I

I

E

S

T

G

H

Y

G

G

E

R

A

P

V

V

M

M

G

W

V

K

T

T

G

G

H

H

S

S

I

L

M

I

K

K

R

K

A

K

L

M

R

K

E

E

Q

T

G

G

A

A

A

L

L

L

A

A

G

G

E

E

L

M

S

S

G

G

H
x
A

I

V

F

F

G

K

Q

E

G

R

F

W

F

F

G

G

W

F

D
|
D

D

D

A

G

A

I

Y

Y

A

S

A

A

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

S

R

Q

S

D

S

Q

R

R

P

D

V

S

S

E

R

H

M

V

L

F

E

S

D

A

W

F

S

P

P

S

A

D

E

I

S

S

T

T

P

P

E

E

I

I

R

N

I

I

P

T

C

V

P

T

D

E

E

D

H

S

K

K

F

F

E

A

V

I

R

E

R

A

V

L

Q

Q

K

R

D

D

L

A

E

Q

-

W

K

G

Q

E

H

G

R

N

I

I

I

T

D

T

V

L

D

D

G

G

V

V

R

R

V

V

L

D

H

Y

P

P

G

K

G

G

W

W

G

G

L

L

V

V

R

R

A

A

S

S

N

N

T

T

Q

T

P

P

E

V

L

L

T

V

L

L

R

R

F

F

E

E

A

A

A

D

T

T

R

E

T

E

Q

E

L

L

E

E

E

R

L

I

R

K

T

T

V

V

active site: R16 (= R15), S104 (= S103), H105 (= H104), K114 (= K113), D238 (= D247), D240 (= D249), D242 (= D251), R243 (= R252), A325 (≠ H334), D336 (= D345)
binding magnesium ion: S104 (= S103), D238 (= D247), D240 (= D249), D242 (= D251)

3rsmA Crystal structure of s108c mutant of pmm/pgm (see paper)
44% identity, 92% coverage: 23:451/464 of query aligns to 10:420/436 of 3rsmA

query
sites
3rsmA

T

T

A

A

S

Y

W

W

M

-

E

-

R

-

L

I

G

G

R

R

A

A

F

I

G

G

T

S

W

E

L

S

S

L

E

A

R

R

G

G

L

E

G

P

R

C

V

V

V

A

L

V

G

G

R

R

D

D

G

G

R

R

A

L

S

S

S

G

P

P

E

E

Y

L

Q

V

L

K

A

Q

M

L

A

I

R

Q

G

G

L

L

L

V

A

D

T

C

G

G

R

C

D

Q

V

V

L

S

L

D

G

V

G

G

C

M

M

V

A

P

T

T

P

P

V

V

L

L

Y

Y

H

Y

A

A

V

A

H

N

S

V

L

L

G

E

T

G

R

K

A

S

G

G

G

V

M

M

V

L

T

T

A

G

S
x
C

H

-

N

-

P

-

E

-

Y

-

N

N

G

G

C

F

K
|
K

L

I

W

V

G

V

G

A

D

G

T

E

V

T

L

L

S

A

P

N

E

E

E

Q

I

I

Q

Q

E

A

V

L

R

R

Y

E

I

R

F

I

E

E

R

K

G

N

V

D

F

L

A

A

V

S

G

G

R

V

G

G

V

S

L

V

G

E

S

Q

H

V

D

D

P

I

I

L

P

P

S

R

W

Y

L

F

E

K

E

Q

V

-

A

-

G

-

L

-

E

-

R

-

I

I

Q

R

P

D

A

I

N

A

G

M

A

A

K

K

P

P

L

M

H

K

I

V

V

V

D

D

G

C

G

G

N

N

G

G

P

V

A

A

G

G

T

V

L

I

T

A

A

P

D

Q

L

L

L

I

E

E

R

A

A

L

G

G

A

C

E

S

A

-

G

-

I

-

R

-

V

V

E

I

R

P

L

L

F

Y

C

C

D

E

V

V

D

D

P

G

A

N

F

F

P

P

N

N

H

H

P

P

D

D

P

P

V

G

V

K

E

P

E

E

N

N

M

L

R

K

Q

D

L

L

Q

I

E

A

R

K

V

V

K

K

T

A

V

E

G

N

A

A

D

D

L

L

G

G

L

L

G

A

L

F

D
|
D

G

G

D
|
D

G

G

D
|
D

R
|
R

L

V

G

G

V

V

D

T

E

N

T

T

G

G

E

T

L

I

W

I

P

Y

G

P

D

D

R

R

L

L

A

M

L

L

F

F

A

A

R

K

D

D

V

V

L

V

T

S

R

R

V

N

P

P

G

G

A

A

R

D

I

I

A

F

D

D

V

V

K

K

C

C

S

T

Q

R

R

R

L

L

F

I

D

A

D

L

I

I

E

S

T

G

H

Y

G

G

E

R

A

P

V

V

M

M

G

W

V

K

T

T

G

G

H

H

S

S

I

L

M

I

K

K

R

K

A

K

L

M

R

K

E

E

Q

T

G

G

A

A

A

L

L

L

A

A

G

G

E

E

L

M

S

S

G

G

H
|
H

I

V

F

F

G

K

Q

E

G

R

F

W

F

F

G

G

W

F

D
|
D

D

D

A

G

A

I

Y

Y

A

S

A

A

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

S

R

Q

S

D

S

Q

R

R

P

D

V

S

S

E

R

H

M

V

L

F

E

S

D

A

W

F

S

P

P

S

A

D

E

I

S

S

T

T

P

P

E

E

I

I

R

N

I

I

P

T

C

V

P

T

D

E

E

D

H

S

K

K

F

F

E

A

V

I

R

E

R

A

V

L

Q

Q

K

R

D

D

L

A

E

Q

-

W

K

G

Q

E

H

G

R

N

I

I

I

T

D

T

V

L

D

D

G

G

V

V

R

R

V

V

L

D

H

Y

P

P

G

K

G

G

W

W

G

G

L

L

V

V

R

R

A

A

S

S

N

N

T

T

Q

T

P

P

E

V

L

L

T

V

L

L

R

R

F

F

E

E

A

A

A

D

T

T

R

E

T

E

Q

E

L

L

E

E

E

R

L

I

R

K

T

T

V

V

active site: C87 (≠ S103), K91 (= K113), D215 (= D247), D217 (= D249), D219 (= D251), R220 (= R252), H302 (= H334), D313 (= D345)
binding phosphate ion: C87 (≠ S103), D215 (= D247), D217 (= D249), D219 (= D251), R220 (= R252)
binding zinc ion: D215 (= D247), D217 (= D249), D219 (= D251)

3uw2A X-ray crystal structure of phosphoglucomutase/phosphomannomutase family protein (bth_i1489)from burkholderia thailandensis (see paper)
39% identity, 99% coverage: 7:464/464 of query aligns to 5:451/458 of 3uw2A

query
sites
3uw2A

A

S

V

I

F

F

R

K

A

A

Y

Y

D

D

I

I

R
|
R

G

G

V

V

V

I

G

G

V

K

D

T

F

L

T

D

A

A

S

D

W

V

M

A

E

R

R

S

L

I

G

G

R

R

A

A

F

F

G

G

T

S

W

E

L

V

S

R

E

A

R

Q

G

G

L

G

G

D

R

A

V

V

L

V

G

A

R

R

D

D

G

G

R

R

A

L

S

S

S

G

P

P

E

E

Y

L

Q

V

L

G

A

A

M

L

A

A

R

D

G

G

L

L

L

R

A

A

T

A

G

G

R

V

D

D

V

V

L

V

L

D

G

V

G

G

C

M

M

V

A

P

T

T

P

P

V

V

L

G

Y

Y

H

F

A

A

V

A

H

S

S

V

L

P

G

L

T

A

R

L

A

S

G

G

-

E

-

R

-

V

-

D

-

S

-

C

-

I

M

V

V

V

T

T

A

G

S
|
S

H
|
H

N

N

P

P

E

D

Y

Y

N

N

G

G

C

F

K
|
K

L

M

W

V

G

L

G

R

D

G

T

A

V

A

L

I

S

Y

P

G

E

D

E

Q

I

I

Q

Q

E

G

V

L

R

Y

Y

K

I

R

F

I

E

V

R

D

G

A

V

R

F

F

A

E

V

T

G

G

R

S

G

G

V

S

L

Y

G

E

S

Q

H

Y

D

D

P

V

I

A

P

D

S

Q

W

Y

L

V

E

E

E

R

V

I

A

V

G

G

L

D

E

I

R

K

I

L

Q

-

P

-

A

-

N

-

G

-

A

T

K

R

P

P

L

L

H

K

I

L

V

V

D

D

G

A

G

G

N

N

G

G

P

V

A

A

G

G

T

P

L

L

T

A

A

T

D

R

L

L

L

F

E

K

R

A

A

L

G

G

A

C

E

E

A

-

G

-

I

-

R

-

V

L

E

V

R

E

L

L

F

F

C

T

D

D

V

I

D

D

P

G

A

N

F

F

P

P

N

N

H

H

P

P

D

D

P

P

V

A

V

H

E

P

E

E

N

N

M

L

R

Q

Q

D

L

V

Q

I

E

A

R

K

V

L

K

K

T

A

V

T

G

D

A

A

D

E

L

I

G

G

L

F

G

A

L

F

D
|
D

G

G

D
|
D

G

G

D
|
D

R
|
R

L

L

G

G

V

V

D

T

E

K

T

D

G

G

E

Q

L

I

W

I

P

Y

G

P

D

D

R

R

L

Q

L

L

A

M

L

L

F

F

A

A

R

E

D

E

V

V

L

L

T

S

R

R

V

N

P

P

G

G

A

A

R

Q

I

I

A

Y

D

D

V

V

K

K

C

C

S

T

Q

R

R

N

L

L

F

A

D

R

D

W

I

V

E

R

T

E

H

K

G

G

E

E

A

P

V

L

M

M

G

W

V

K

T

T

G

G

H

H

S

S

I

L

M

V

K

K

R

A

A

K

L

L

R

R

E

E

Q

T

G

G

A

A

A

P

L

L

A

A

G

G

E

E

L

M

S

S

G

G

H
|
H

I

V

F

F

G

K

Q

D

G

R

F

W

F

Y

G

G

W

F

D

D

A

G

A

L

Y

Y

A

T

A

G

L

A

R

R

L

L

T

L

A

E

L

I

V

L

S

A

R

R

S

V

S

A

R

D

P

P

V

-

S

S

R

A

M

L

L

L

E

N

D

G

W

L

S

P

P

N

A

A

E

V

S

S

T

T

P

P

E

E

I

L

R

Q

I

L

P

N

C

V

P

K

D

L

E

I

H

D

K

K

F

L

E

-

V

-

R

-

R

R

V

A

Q

D

K

A

D

K

L

F

E

D

K

G

Q

A

H

D

R

E

I

V

D

T

V

I

D

D

G

G

V

L

R

R

V

V

L

E

H

Y

P

P

G

D

G

G

W

F

G

G

L

L

V

A

R

R

A

S

S

S

N

N

T

T

Q

T

P

P

E

V

L

V

T

V

L

L

R

R

F

F

E

E

A

A

A

T

T

S

R

D

T

A

Q

A

L

L

E

A

E

R

L

I

R

Q

T

-

V

-

C

-

D

D

A

D

V

F

N

R

R

R

A

A

V

L

R

K

A

A

L

A

Q

K

active site: R13 (= R15), S109 (= S103), H110 (= H104), K119 (= K113), D243 (= D247), D245 (= D249), D247 (= D251), R248 (= R252), H330 (= H334)
binding zinc ion: D243 (= D247), D245 (= D249), D247 (= D251)

1wqaA Crystal structure of pyrococcus horikoshii phosphomannomutase/phosphoglucomutase complexed with mg2+
30% identity, 98% coverage: 8:460/464 of query aligns to 4:454/455 of 1wqaA

query
sites
1wqaA

V

L

F

F

R

G

A

T

Y

F

D

G

I

V

R
|
R

G

G

V

I

V

A

G

N

V

E

D

K

F

I

T

T

A

P

S

E

W

F

M

A

E

M

R

K

L

I

G

G

R

M

A

A

F

F

G

G

T

T

W

L

L

L

S

K

E

R

R

E

G

G

L

R

G

K

R

K

-

P

-

L

V

V

L

V

G

G

R

R

D

D

G

T

R

R

A

V

S

S

S

G

P

E

E

M

Y

L

Q

K

L

E

A

A

M

L

A

I

R

S

G

G

L

L

A

S

T

V

G

G

R

C

D

D

V

V

L

I

L

D

G

V

G

G

C

I

M

A

A

P

T

T

P

P

V

A

L

V

Y

Q

H

W

A

A

V

T

H

K

S

H

L

F

G

N

T

A

R

D

A

G

G

G

G

A

M

V

V

I

T

T

A

A

S
|
S

H
|
H

N

N

P

P

E

E

Y

Y

N

N

G

G

C

I

K
|
K

L

L

W

L

G

E

G

P

D

N

T

G

V

M

-

G

L

L

S

K

P

K

E

E

E

R

I

E

Q

A

E

I

V

V

R

E

Y

E

I

L

F

F

E

F

R

K

G

E

V

D

F

F

A

D

V

R

G

A

R

K

-

W

-

Y

-

E

-

I

G

G

V

E

L

V

G

R

S

R

H

E

D

D

P

I

I

I

P

K

S

P

W

Y

L

I

E

E

E

A

V

I

A

K

G

S

L

-

E

-

R

K

I

V

Q

D

P

V

P

E

A

A

N

I

G

K

A

K

K

R

P

K

L

P

H

F

I

V

V

V

D

D

G

T

G

S

N

N

G

G

P

-

A

A

G

G

T

S

L

L

T

T

A

L

D

P

L

Y

L

L

E

L

R

R

A

-

G

-

A

-

E

E

A

L

G

G

I

C

R

K

V

V

E

I

R

T

L

V

F

N

C

A

D

Q

V

P

D

D

P

G

A

Y

F

F

P

P

N

A

H

R

H

N

P

P

D

E

P

P

V

N

V

-

E

E

N

N

M

L

R

K

Q

E

L

F

Q

M

E

E

R

I

V

V

K

K

T

A

V

L

G

G

A

A

D

D

L

F

G

G

L

V

G

A

L

Q

D
|
D

G

G

D
|
D

G

A

D
|
D

R
|
R

L

A

G

V

V

F

V

I

D

D

E

E

T

N

G

G

E

R

L

F

W

I

P

Q

G

G

D

D

R

K

L

T

L

F

A

A

L

L

F

V

A

A

R

D

D

A

V

V

L

L

T

K

R

E

V

K

P

G

G

G

A

G

R

L

I

L

I

V

A

T

D

T

V

V

K

A

C

T

S

S

Q

N

R

L

L

L

F

D

D

D

D

I

I

A

E

K

T

K

H

H

G

G

G

A

E

K

A

V

V

M

M

R

G

T

V

K

T

V

G

G

H

D

S

L

I

I

M

V

K

A

R

R

A

A

L

L

R

Y

E

E

Q

N

G

N

A

G

A

T

L

I

A

G

G

G

E

E

L

E

S

N

G

G

H
x
G

I

V

F

I

F

F

G

P

Q

E

G

H

F

V

F

L

G

G

W
x
R

D

D

D

G

A

A

A

M

Y

T

A

V

A

A

L

-

R

K

L

V

T

V

A

E

L

I

V

F

S

A

R

K

S

S

S

G

R

K

P

K

V

F

S

S

R

E

M

L

L

I

E

D

D

E

W

L

S

P

P

K

A

Y

E

Y

S

Q

T

I

P

K

E

T

I

K

R

R

I

H

P

V

C

E

P

G

D

D

E

R

H

H

K

A

F

I

E

-

V

V

V

N

R

K

R

V

V

A

Q

E

K

M

D

A

L

R

E

E

K

R

Q

G

H

Y

R

T

I

V

I

D

D

T

V

T

D

D

G

G

V

A

R

K

V

I

L

I

H

F

P

E

G

D

G

G

W

W

G

V

L

L

V

V

R

R

A

A

S

S

N

G

T

T

Q

E

P

P

E

I

L

I

T

R

L

I

R

F

F

S

E

E

A

A

A

K

T

S

R

K

T

E

Q

K

L

A

E

Q

E

E

L

Y

R

L

T

N

V

L

V

G

C

I

D

E

A

L

V

L

N

E

R

K

A

A

V

L

active site: R11 (= R15), S101 (= S103), H102 (= H104), K111 (= K113), D243 (= D247), D245 (= D249), D247 (= D251), R248 (= R252), G330 (≠ H334), R340 (≠ W344)
binding magnesium ion: S101 (= S103), D243 (= D247), D245 (= D249), D247 (= D251)

6mlwA Crystal structure of x. Citri phosphoglucomutase in complex with 2- fluoro mannosyl-1-methyl-phosphonic acid (see paper)
33% identity, 95% coverage: 9:450/464 of query aligns to 7:440/449 of 6mlwA

query
sites
6mlwA

F

F

R

K

A

A

Y

Y

D

D

I

I

R
|
R

G

G

V

R

V

V

G

P

V

D

D

E

F

L

T

N

A

E

S

D

W

L

M

A

E

R

R

R

L

I

G

G

R

V

A

A

F

L

G

A

T

A

W

Q

L

L

S

D

E

Q

R

-

G

-

L

-

G

G

R

P

V

V

L

L

G

G

R

H

D

D

G

V

R

R

A

L

S

A

S

S

P

P

E

A

Y

L

Q

Q

L

E

A

A

M

L

A

S

R

A

G

G

L

L

L

R

A

A

T

S

G

G

R

R

D

D

V

V

L

I

L

D

G

I

G

G

C

L

M

C

A

G

T

T

P

E

V

E

L

V

Y

Y

H

F

A

Q

V

T

H

D

S

Y

L

L

G

K

T

A

R

A

A

G

G

G

G

V

M

M

V

V

T

T

A

A

S
|
S

H
|
H

N

N

P

P

P

M

E

D

Y

Y

N

N

G

G

C

M

K
|
K

L

L

W

V

G

R

G

-

D

-

T

-

V

-

L

-

S

-

P

-

E

-

I

-

Q

E

E

Q

V

A

R

R

Y

P

I

I

F

S

-

S

E

D

R

T

G

G

V

L

F

F

A

A

V

I

G

-

R

R

G

D

V

T

L

V

G

A

S

A

H

D

D

T

P

A

I

A

P

P

-

G

-

E

-

P

-

T

-

A

-

S

-

E

-

Q

S

S

W

R

L

T

E

D

E

K

V

T

A

A

G

Y

L

L

E

E

R

H

I

L

Q

L

P

S

P

Y

A

V

N

D

G

R

A

S

-

T

-

L

K

K

P

P

L

L

H

K

I

L

V

V

D

N

G

A

G

G

N

N

G

G

P

G

A

A

G

G

T

-

L

L

T

I

A

V

D

D

L

L

E

-

R

-

A

-

G

A

A

P

E

H

A

L

G

P

I

F

R

E

V

F

E

V

R

R

L

V

F

F

C

H

D

E

V

P

D

D

P

G

A

N

F

F

P

P

N

N

H

G

H

I

P

P

D

N

P

P

V

L

E

P

E

E

N

N

M

R

R

D

Q

A

L

T

Q

A

E

K

R

A

V

V

K

K

T

D

V

N

G

G

A

A

D

D

L

F

G

G

L

I

G

A

L

W

D
|
D

G

G

D
|
D

G

F

D
|
D

R
|
R

L

C

G

F

V

F

D

D

E

H

T

T

G

G

E

R

L

F

W

I

P

E

G

G

D

Y

R

Y

L

L

L

V

A

G

L

L

F

L

A

A

R

Q

D

A

V

I

L

L

T

A

R

K

V

Q

P

P

G

G

A

G

R

K

I

V

A

H

D

D

V

P

K

R

C

L

S

T

Q

W

R

N

L

T

F

V

D

E

D

Q

I

V

E

E

T

E

H

A

G

G

E

I

A

P

V

V

M

L

G

C

V

K

T

S

G
|
G

H
|
H

S

A

I

F

M

I

K

K

R

E

A

K

L

M

R

R

E

S

Q

E

G

N

A

A

A

V

L

Y

A

G

G

G

E
|
E

L

M

S
|
S

G

A

H
|
H

I

H

F

Y

F

F

G

R

Q

E

G

-

F

-

F

F

G

A

W

Y

D

A

D

D

A

S

A

G

Y

M

A

I

A

P

L

W

R

L

L

L

T

I

A

A

-

E

L

L

V

V

S

S

R

Q

S

S

S

G

R

R

P

S

V

L

S

A

R

D

M

L

L

V

E

E

D

-

W

-

S

-

P

-

A

-

E

-

S

-

T

A

P

R

E

M

I

Q

R

K

I

F

P

P

C

C

P

S

D

G

E

E

H

I

K

N

F

F

E

K

V

V

-

A

-

D

-

A

-

K

-

A

-

S

V

V

R

A

R

R

V

V

Q

M

K

E

D

H

L

Y

E

A

K

S

Q

L

H

S

R

P

I

E

I

L

D

D

-

Y

V

T

D

D

G

G

V

I

R

S

V

A

L

D

H

F

P

-

G

G

G

Q

W

W

G

R

L

F

-

N

V

L

R
|
R

A

S

S
|
S

N
|
N

T
|
T

Q

E

P

P

E

L

L

L

T
x
R

L

L

R

N

F

V

E

E

A

T

A

R

T

G

R

D

T

A

Q

A

L

L

E

L

E

E

L

T

R

R

T

T

active site: R13 (= R15), S98 (= S103), H99 (= H104), K108 (= K113), D238 (= D247), D240 (= D249), D242 (= D251), R243 (= R252), H325 (= H334)
binding 2,6-anhydro-5,7-dideoxy-5-fluoro-7-phosphono-D-glycero-D-manno-heptitol: G303 (= G312), H304 (= H313), E321 (= E330), S323 (= S332), H325 (= H334), R415 (= R425), S417 (= S427), N418 (= N428), T419 (= T429), R424 (≠ T434)
binding magnesium ion: S98 (= S103), D238 (= D247), D240 (= D249), D242 (= D251)

5bmpA Crystal structure of phosphoglucomutase from xanthomonas citri complexed with glucose-1-phosphate (see paper)
33% identity, 95% coverage: 9:450/464 of query aligns to 7:440/449 of 5bmpA

query
sites
5bmpA

F

F

R

K

A

A

Y

Y

D

D

I

I

R
|
R

G

G

V

R

V

V

G

P

V

D

D

E

F

L

T

N

A

E

S

D

W

L

M

A

E

R

R

R

L

I

G

G

R

V

A

A

F

L

G

A

T

A

W

Q

L

L

S

D

E

Q

R

-

G

-

L

-

G

G

R

P

V

V

L

L

G

G

R

H

D

D

G

V

R

R

A

L

S

A

S

S

P

P

E

A

Y

L

Q

Q

L

E

A

A

M

L

A

S

R

A

G

G

L

L

L

R

A

A

T

S

G

G

R

R

D

D

V

V

L

I

L

D

G

I

G

G

C

L

M

C

A

G

T

T

P

E

V

E

L

V

Y

Y

H

F

A

Q

V

T

H

D

S

Y

L

L

G

K

T

A

R

A

A

G

G

G

G

V

M

M

V

V

T

T

A

A

S
|
S

H
|
H

N

N

P

P

P

M

E

D

Y

Y

N

N

G

G

C

M

K
|
K

L

L

W

V

G

R

G

-

D

-

T

-

V

-

L

-

S

-

P

-

E

-

I

-

Q

E

E

Q

V

A

R

R

Y

P

I

I

F

S

-

S

E

D

R

T

G

G

V

L

F

F

A

A

V

I

G

-

R

R

G

D

V

T

L

V

G

A

S

A

H

D

D

T

P

A

I

A

P

P

-

G

-

E

-

P

-

T

-

A

-

S

-

E

-

Q

S

S

W

R

L

T

E

D

E

K

V

T

A

A

G

Y

L

L

E

E

R

H

I

L

Q

L

P

S

P

Y

A

V

N

D

G

R

A

S

-

T

-

L

K

K

P

P

L

L

H

K

I

L

V

V

D

N

G

A

G

G

N

N

G

G

P

G

A

A

G

G

T

-

L

L

T

I

A

V

D

D

L

L

E

-

R

-

A

-

G

A

A

P

E

H

A

L

G

P

I

F

R

E

V

F

E

V

R

R

L

V

F

F

C

H

D

E

V

P

D

D

P

G

A

N

F

F

P

P

N

N

H

G

H

I

P

P

D

N

P

P

V

L

E

P

E

E

N

N

M

R

R

D

Q

A

L

T

Q

A

E

K

R

A

V

V

K

K

T

D

V

N

G

G

A

A

D

D

L

F

G

G

L

I

G

A

L

W

D
|
D

G

G

D
|
D

G

F

D
|
D

R
|
R

L

C

G

F

V

F

D

D

E

H

T

T

G

G

E

R

L

F

W

I

P

E

G

G

D

Y

R

Y

L

L

L

V

A

G

L

L

F

L

A

A

R

Q

D

A

V

I

L

L

T

A

R

K

V

Q

P

P

G

G

A

G

R

K

I

V

A

H

D

D

V

P

K
x
R

C

L

S

T

Q

W

R

N

L

T

F

V

D

E

D

Q

I

V

E

E

T

E

H

A

G

G

E

I

A

P

V

V

M

L

G

C

V

K

T

S

G
|
G

H

H

S

A

I

F

M

I

K

K

R

E

A

K

L

M

R

R

E

S

Q

E

G

N

A

A

A

V

L

Y

A

G

G

G

E
|
E

L

M

S
|
S

G

A

H
|
H

I

H

F

Y

F

F

G

R

Q

E

G

-

F

-

F

F

G

A

W

Y

D

A

D

D

A

S

A

G

Y

M

A

I

A

P

L

W

R

L

L

L

T

I

A

A

-

E

L

L

V

V

S

S

R

Q

S

S

S

G

R

R

P

S

V

L

S

A

R

D

M

L

L

V

E

E

D

-

W

-

S

-

P

-

A

-

E

-

S

-

T

A

P

R

E

M

I

Q

R

K

I

F

P

P

C

C

P

S

D

G

E

E

H

I

K

N

F

F

E

K

V

V

-

A

-

D

-

A

-

K

-

A

-

S

V

V

R

A

R

R

V

V

Q

M

K

E

D

H

L

Y

E

A

K

S

Q

L

H

S

R

P

I

E

I

L

D

D

-

Y

V

T

D

D

G

G

V

I

R

S

V

A

L

D

H

F

P

-

G

G

G

Q

W

W

G

R

L

F

-

N

V

L

R
|
R

A

S

S
|
S

N
|
N

T
|
T

Q

E

P

P

E

L

L

L

T
x
R

L

L

R

N

F

V

E

E

A

T

A

R

T

G

R

D

T

A

Q

A

L

L

E

L

E

E

L

T

R

R

T

T

active site: R13 (= R15), S98 (= S103), H99 (= H104), K108 (= K113), D238 (= D247), D240 (= D249), D242 (= D251), R243 (= R252), H325 (= H334)
binding 1-O-phosphono-alpha-D-glucopyranose: R281 (≠ K290), G303 (= G312), E321 (= E330), S323 (= S332), H325 (= H334), R415 (= R425), S417 (= S427), N418 (= N428), T419 (= T429), R424 (≠ T434)
binding magnesium ion: S98 (= S103), D238 (= D247), D240 (= D249), D242 (= D251)

6nqhA Xanthomonas citri dephospho-pgm in complex with xylose-1-phosphate
33% identity, 95% coverage: 9:450/464 of query aligns to 6:439/448 of 6nqhA

query
sites
6nqhA

F

F

R

K

A

A

Y

Y

D

D

I

I

R
|
R

G

G

V

R

V

V

G

P

V

D

D

E

F

L

T

N

A

E

S

D

W

L

M

A

E

R

R

R

L

I

G

G

R

V

A

A

F

L

G

A

T

A

W

Q

L

L

S

D

E

Q

R

-

G

-

L

-

G

G

R

P

V

V

L

L

G

G

R

H

D

D

G

V

R

R

A

L

S

A

S

S

P

P

E

A

Y

L

Q

Q

L

E

A

A

M

L

A

S

R

A

G

G

L

L

L

R

A

A

T

S

G

G

R

R

D

D

V

V

L

I

L

D

G

I

G

G

C

L

M

C

A

G

T

T

P

E

V

E

L

V

Y

Y

H

F

A

Q

V

T

H

D

S

Y

L

L

G

K

T

A

R

A

A

G

G

G

G

V

M

M

V

V

T

T

A

A

S
|
S

H
|
H

N

N

P

P

P

M

E

D

Y

Y

N

N

G

G

C

M

K
|
K

L

L

W

V

G

R

G

-

D

-

T

-

V

-

L

-

S

-

P

-

E

-

I

-

Q

E

E

Q

V

A

R

R

Y

P

I

I

F

S

-

S

E

D

R

T

G

G

V

L

F

F

A

A

V

I

G

-

R

R

G

D

V

T

L

V

G

A

S

A

H

D

D

T

P

A

I

A

P

P

-

G

-

E

-

P

-

T

-

A

-

S

-

E

-

Q

S

S

W

R

L

T

E

D

E

K

V

T

A

A

G

Y

L

L

E

E

R

H

I

L

Q

L

P

S

P

Y

A

V

N

D

G

R

A

S

-

T

-

L

K

K

P

P

L

L

H

K

I

L

V

V

D

N

G

A

G

G

N

N

G

G

P

G

A

A

G

G

T

-

L

L

T

I

A

V

D

D

L

L

E

-

R

-

A

-

G

A

A

P

E

H

A

L

G

P

I

F

R

E

V

F

E

V

R

R

L

V

F

F

C

H

D

E

V

P

D

D

P

G

A

N

F

F

P

P

N

N

H

G

H

I

P

P

D

N

P

P

V

L

E

P

E

E

N

N

M

R

R

D

Q

A

L

T

Q

A

E

K

R

A

V

V

K

K

T

D

V

N

G

G

A

A

D

D

L

F

G

G

L

I

G

A

L

W

D
|
D

G

G

D
|
D

G

F

D
|
D

R
|
R

L

C

G

F

V

F

D

D

E

H

T

T

G

G

E

R

L

F

W

I

P

E

G

G

D

Y

R

Y

L

L

L

V

A

G

L

L

F

L

A

A

R

Q

D

A

V

I

L

L

T

A

R

K

V

Q

P

P

G

G

A

G

R

K

I

V

A

H

D

D

V

P

K
x
R

C

L

S

T

Q

W

R

N

L

T

F

V

D

E

D

Q

I

V

E

E

T

E

H

A

G

G

E

I

A

P

V

V

M

L

G

C

V

K

T
x
S

G
|
G

H

H

S

A

I

F

M

I

K

K

R

E

A

K

L

M

R

R

E

S

Q

E

G

N

A

A

A

V

L

Y

A

G

G

G

E
|
E

L

M

S
|
S

G

A

H
|
H

I

H

F

Y

F

F

G

R

Q

E

G

-

F

-

F

F

G

A

W

Y

D

A

D

D

A

S

A

G

Y

M

A

I

A

P

L

W

R

L

L

L

T

I

A

A

-

E

L

L

V

V

S

S

R

Q

S

S

S

G

R

R

P

S

V

L

S

A

R

D

M

L

L

V

E

E

D

-

W

-

S

-

P

-

A

-

E

-

S

-

T

A

P

R

E

M

I

Q

R

K

I

F

P

P

C

C

P

S

D

G

E

E

H

I

K

N

F

F

E

K

V

V

-

A

-

D

-

A

-

K

-

A

-

S

V

V

R

A

R

R

V

V

Q

M

K

E

D

H

L

Y

E

A

K

S

Q

L

H

S

R

P

I

E

I

L

D

D

-

Y

V

T

D

D

G

G

V

I

R

S

V

A

L

D

H

F

P

-

G

G

G

Q

W

W

G

R

L

F

-

N

V

L

R
|
R

A

S

S
|
S

N
|
N

T
|
T

Q

E

P

P

E

L

L

L

T
x
R

L

L

R

N

F

V

E

E

A

T

A

R

T

G

R

D

T

A

Q

A

L

L

E

L

E

E

L

T

R

R

T

T

active site: R12 (= R15), S97 (= S103), H98 (= H104), K107 (= K113), D237 (= D247), D239 (= D249), D241 (= D251), R242 (= R252), H324 (= H334)
binding magnesium ion: D237 (= D247), D239 (= D249), D241 (= D251)
binding 1-O-phosphono-alpha-D-xylopyranose: R12 (= R15), S97 (= S103), H98 (= H104), K107 (= K113), D239 (= D249), R242 (= R252), R280 (≠ K290), S301 (≠ T311), G302 (= G312), E320 (= E330), S322 (= S332), H324 (= H334), R414 (= R425), S416 (= S427), N417 (= N428), T418 (= T429), R423 (≠ T434)

6np8A Xanthomonas citri phospho-pgm in complex with mannose-6-phosphate (see paper)
33% identity, 95% coverage: 9:450/464 of query aligns to 6:439/448 of 6np8A

query
sites
6np8A

F

F

R

K

A

A

Y
|
Y

D

D

I

I

R
|
R

G

G

V

R

V

V

G

P

V

D

D

E

F

L

T

N

A

E

S

D

W

L

M

A

E

R

R

R

L

I

G

G

R

V

A

A

F

L

G

A

T

A

W

Q

L

L

S

D

E

Q

R

-

G

-

L

-

G

G

R

P

V

V

L

L

G

G

R

H

D

D

G

V

R

R

A

L

S

A

S

S

P

P

E

A

Y

L

Q

Q

L

E

A

A

M

L

A

S

R

A

G

G

L

L

L

R

A

A

T

S

G

G

R

R

D

D

V

V

L

I

L

D

G

I

G

G

C

L

M

C

A

G

T

T

P

E

V

E

L

V

Y

Y

H

F

A

Q

V

T

H

D

S

Y

L

L

G

K

T

A

R

A

A

G

G

G

G

V

M

M

V

V

T

T

A

A

S
|
S

H
|
H

N

N

P

P

P

M

E

D

Y

Y

N

N

G

G

C

M

K
|
K

L

L

W

V

G

R

G

-

D

-

T

-

V

-

L

-

S

-

P

-

E

-

I

-

Q

E

E

Q

V

A

R

R

Y

P

I

I

F

S

-

S

E

D

R

T

G

G

V

L

F

F

A

A

V

I

G

-

R

R

G

D

V

T

L

V

G

A

S

A

H

D

D

T

P

A

I

A

P

P

-

G

-

E

-

P

-

T

-

A

-

S

-

E

-

Q

S

S

W

R

L

T

E

D

E

K

V

T

A

A

G

Y

L

L

E

E

R

H

I

L

Q

L

P

S

P

Y

A

V

N

D

G

R

A

S

-

T

-

L

K

K

P

P

L

L

H

K

I

L

V

V

D

N

G

A

G

G

N

N

G

G

P

G

A

A

G

G

T

-

L

L

T

I

A

V

D

D

L

L

E

-

R

-

A

-

G

A

A

P

E

H

A

L

G

P

I

F

R

E

V

F

E

V

R

R

L

V

F

F

C

H

D

E

V

P

D

D

P

G

A

N

F

F

P

P

N

N

H

G

H

I

P

P

D

N

P

P

V

L

E

P

E

E

N

N

M

R

R

D

Q

A

L

T

Q

A

E

K

R

A

V

V

K

K

T

D

V

N

G

G

A

A

D

D

L

F

G

G

L

I

G

A

L

W

D
|
D

G

G

D
|
D

G

F

D
|
D

R
|
R

L

C

G

F

V

F

D

D

E

H

T

T

G

G

E

R

L

F

W

I

P

E

G

G

D

Y

R

Y

L

L

L

V

A

G

L

L

F

L

A

A

R

Q

D

A

V

I

L

L

T

A

R

K

V

Q

P

P

G

G

A

G

R

K

I

V

A

H

D

D

V

P

K
x
R

C

L

S

T

Q

W

R

N

L

T

F

V

D

E

D

Q

I

V

E

E

T

E

H

A

G

G

E

I

A

P

V

V

M

L

G

C

V

K

T

S

G
|
G

H
|
H

S

A

I

F

M

I

K

K

R

E

A

K

L

M

R

R

E

S

Q

E

G

N

A

A

A

V

L

Y

A

G

G

G

E
|
E

L

M

S
|
S

G

A

H
|
H

I

H

F

Y

F

F

G

R

Q

E

G

-

F

-

F

F

G

A

W

Y

D

A

D

D

A

S

A

G

Y

M

A

I

A

P

L

W

R

L

L

L

T

I

A

A

-

E

L

L

V

V

S

S

R

Q

S

S

S

G

R

R

P

S

V

L

S

A

R

D

M

L

L

V

E

E

D

-

W

-

S

-

P

-

A

-

E

-

S

-

T

A

P

R

E

M

I

Q

R

K

I

F

P

P

C

C

P

S

D

G

E

E

H

I

K

N

F

F

E

K

V

V

-

A

-

D

-

A

-

K

-

A

-

S

V

V

R

A

R

R

V

V

Q

M

K

E

D

H

L

Y

E

A

K

S

Q

L

H

S

R

P

I

E

I

L

D

D

-

Y

V

T

D

D

G

G

V

I

R

S

V

A

L

D

H

F

P

-

G

G

G

Q

W

W

G

R

L

F

-

N

V

L

R
|
R

A

S

S
|
S

N
|
N

T
|
T

Q

E

P

P

E

L

L

L

T
x
R

L

L

R

N

F

V

E

E

A

T

A

R

T

G

R

D

T

A

Q

A

L

L

E

L

E

E

L

T

R

R

T

T

active site: R12 (= R15), S97 (= S103), H98 (= H104), K107 (= K113), D237 (= D247), D239 (= D249), D241 (= D251), R242 (= R252), H324 (= H334)
binding calcium ion: S97 (= S103), D237 (= D247), D239 (= D249), D241 (= D251)
binding 6-O-phosphono-alpha-D-mannopyranose: Y9 (= Y12), R280 (≠ K290), G302 (= G312), H303 (= H313), E320 (= E330), S322 (= S332), H324 (= H334), R414 (= R425), S416 (= S427), N417 (= N428), T418 (= T429), R423 (≠ T434)

6nolA Xanthomonas citri dephospho-pgm in complex with mannose-1-phosphate (see paper)
33% identity, 95% coverage: 9:450/464 of query aligns to 6:439/448 of 6nolA

query
sites
6nolA

F

F

R

K

A

A

Y

Y

D

D

I

I

R
|
R

G

G

V

R

V

V

G

P

V

D

D

E

F

L

T

N

A

E

S

D

W

L

M

A

E

R

R

R

L

I

G

G

R

V

A

A

F

L

G

A

T

A

W

Q

L

L

S

D

E

Q

R

-

G

-

L

-

G

G

R

P

V

V

L

L

G

G

R

H

D

D

G

V

R

R

A

L

S

A

S

S

P

P

E

A

Y

L

Q

Q

L

E

A

A

M

L

A

S

R

A

G

G

L

L

L

R

A

A

T

S

G

G

R

R

D

D

V

V

L

I

L

D

G

I

G

G

C

L

M

C

A

G

T

T

P

E

V

E

L

V

Y

Y

H

F

A

Q

V

T

H

D

S

Y

L

L

G

K

T

A

R

A

A

G

G

G

G

V

M

M

V

V

T

T

A

A

S
|
S

H
|
H

N

N

P

P

P

M

E

D

Y

Y

N

N

G

G

C

M

K
|
K

L

L

W

V

G

R

G

-

D

-

T

-

V

-

L

-

S

-

P

-

E

-

I

-

Q

E

E

Q

V

A

R

R

Y

P

I

I

F

S

-

S

E

D

R

T

G

G

V

L

F

F

A

A

V

I

G

-

R

R

G

D

V

T

L

V

G

A

S

A

H

D

D

T

P

A

I

A

P

P

-

G

-

E

-

P

-

T

-

A

-

S

-

E

-

Q

S

S

W

R

L

T

E

D

E

K

V

T

A

A

G

Y

L

L

E

E

R

H

I

L

Q

L

P

S

P

Y

A

V

N

D

G

R

A

S

-

T

-

L

K

K

P

P

L

L

H

K

I

L

V

V

D

N

G

A

G

G

N

N

G

G

P

G

A

A

G

G

T

-

L

L

T

I

A

V

D

D

L

L

E

-

R

-

A

-

G

A

A

P

E

H

A

L

G

P

I

F

R

E

V

F

E

V

R

R

L

V

F

F

C

H

D

E

V

P

D

D

P

G

A

N

F

F

P

P

N

N

H

G

H

I

P

P

D

N

P

P

V

L

E

P

E

E

N

N

M

R

R

D

Q

A

L

T

Q

A

E

K

R

A

V

V

K

K

T

D

V

N

G

G

A

A

D

D

L

F

G

G

L

I

G

A

L

W

D
|
D

G

G

D
|
D

G

F

D
|
D

R
|
R

L

C

G

F

V

F

D

D

E

H

T

T

G

G

E

R

L

F

W

I

P

E

G

G

D

Y

R

Y

L

L

L

V

A

G

L

L

F

L

A

A

R

Q

D

A

V

I

L

L

T

A

R

K

V

Q

P

P

G

G

A

G

R

K

I

V

A

H

D

D

V

P

K

R

C

L

S

T

Q

W

R

N

L

T

F

V

D

E

D

Q

I

V

E

E

T

E

H

A

G

G

E

I

A

P

V

V

M

L

G

C

V

K

T

S

G
|
G

H

H

S

A

I

F

M

I

K

K

R

E

A

K

L

M

R

R

E

S

Q

E

G

N

A

A

A

V

L

Y

A

G

G

G

E
|
E

L

M

S
|
S

G

A

H
|
H

I

H

F

Y

F

F

G

R

Q

E

G

-

F

-

F

F

G

A

W

Y

D

A

D

D

A

S

A

G

Y

M

A

I

A

P

L

W

R

L

L

L

T

I

A

A

-

E

L

L

V

V

S

S

R

Q

S

S

S

G

R

R

P

S

V

L

S

A

R

D

M

L

L

V

E

E

D

-

W

-

S

-

P

-

A

-

E

-

S

-

T

A

P

R

E

M

I

Q

R

K

I

F

P

P

C

C

P

S

D

G

E

E

H

I

K

N

F

F

E

K

V

V

-

A

-

D

-

A

-

K

-

A

-

S

V

V

R

A

R

R

V

V

Q

M

K

E

D

H

L

Y

E

A

K

S

Q

L

H

S

R

P

I

E

I

L

D

D

-

Y

V

T

D

D

G

G

V

I

R

S

V

A

L

D

H

F

P

-

G

G

G

Q

W

W

G

R

L

F

-

N

V

L

R
|
R

A

S

S
|
S

N
|
N

T
|
T

Q

E

P

P

E

L

L

L

T
x
R

L

L

R

N

F

V

E

E

A

T

A

R

T

G

R

D

T

A

Q

A

L

L

E

L

E

E

L

T

R

R

T

T

active site: R12 (= R15), S97 (= S103), H98 (= H104), K107 (= K113), D237 (= D247), D239 (= D249), D241 (= D251), R242 (= R252), H324 (= H334)
binding 1-O-phosphono-alpha-D-mannopyranose: G302 (= G312), E320 (= E330), S322 (= S332), H324 (= H334), R414 (= R425), S416 (= S427), N417 (= N428), T418 (= T429), R423 (≠ T434)
binding magnesium ion: S97 (= S103), D237 (= D247), D239 (= D249), D241 (= D251)

6nnpA Xanthomonas citri dephospho-pgm in complex with glucose-6-phosphate (see paper)
33% identity, 95% coverage: 9:450/464 of query aligns to 6:439/448 of 6nnpA

query
sites
6nnpA

F

F

R

K

A

A

Y

Y

D

D

I

I

R
|
R

G

G

V

R

V

V

G

P

V

D

D

E

F

L

T

N

A

E

S

D

W

L

M

A

E

R

R

R

L

I

G

G

R

V

A

A

F

L

G

A

T

A

W

Q

L

L

S

D

E

Q

R

-

G

-

L

-

G

G

R

P

V

V

L

L

G

G

R

H

D

D

G

V

R

R

A

L

S

A

S

S

P

P

E

A

Y

L

Q

Q

L

E

A

A

M

L

A

S

R

A

G

G

L

L

L

R

A

A

T

S

G

G

R

R

D

D

V

V

L

I

L

D

G

I

G

G

C

L

M

C

A

G

T

T

P

E

V

E

L

V

Y

Y

H

F

A

Q

V

T

H

D

S

Y

L

L

G

K

T

A

R

A

A

G

G

G

G

V

M

M

V

V

T

T

A

A

S
|
S

H
|
H

N

N

P

P

P

M

E

D

Y

Y

N

N

G

G

C

M

K
|
K

L

L

W

V

G

R

G

-

D

-

T

-

V

-

L

-

S

-

P

-

E

-

I

-

Q

E

E

Q

V

A

R

R

Y

P

I

I

F

S

-

S

E

D

R

T

G

G

V

L

F

F

A

A

V

I

G

-

R

R

G

D

V

T

L

V

G

A

S

A

H

D

D

T

P

A

I

A

P

P

-

G

-

E

-

P

-

T

-

A

-

S

-

E

-

Q

S

S

W

R

L

T

E

D

E

K

V

T

A

A

G

Y

L

L

E

E

R

H

I

L

Q

L

P

S

P

Y

A

V

N

D

G

R

A

S

-

T

-

L

K

K

P

P

L

L

H

K

I

L

V

V

D

N

G

A

G

G

N

N

G

G

P

G

A

A

G

G

T

-

L

L

T

I

A

V

D

D

L

L

E

-

R

-

A

-

G

A

A

P

E

H

A

L

G

P

I

F

R

E

V

F

E

V

R

R

L

V

F

F

C

H

D

E

V

P

D

D

P

G

A

N

F

F

P

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R

L

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T

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A

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L

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T

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R

T

T

active site: R12 (= R15), S97 (= S103), H98 (= H104), K107 (= K113), D237 (= D247), D239 (= D249), D241 (= D251), R242 (= R252), H324 (= H334)
binding 6-O-phosphono-alpha-D-glucopyranose: R280 (≠ K290), G302 (= G312), H303 (= H313), E320 (= E330), H324 (= H334), R414 (= R425), S416 (= S427), N417 (= N428), T418 (= T429), R423 (≠ T434)
binding magnesium ion: S97 (= S103), D237 (= D247), D239 (= D249), D241 (= D251)

Query Sequence

>WP_078717499.1 NCBI__GCF_900167125.1:WP_078717499.1
MQRSGDAVFRAYDIRGVVGVDFTASWMERLGRAFGTWLSERGLGRVVLGRDGRASSPEYQ
LAMARGLLATGRDVLLGGCMATPVLYHAVHSLGTRAGGMVTASHNPPEYNGCKLWGGDTV
LSPEEIQEVRYIFERGVFAVGRGVLGSHDPIPSWLEEVAGLERIQPPANGAKPLHIVVDG
GNGPAGTLTADLLERAGAEAGIRVERLFCDVDPAFPNHHPDPVVEENMRQLQERVKTVGA
DLGLGLDGDGDRLGVVDETGELWPGDRLLALFARDVLTRVPGARIIADVKCSQRLFDDIE
THGGEAVMGVTGHSIMKRALREQGAALAGELSGHIFFGQGFFGWDDAAYAALRLTALVSR
SSRPVSRMLEDWSPAESTPEIRIPCPDEHKFEVVRRVQKDLEKQHRIIDVDGVRVLHPGG
WGLVRASNTQPELTLRFEAATRTQLEELRTVVCDAVNRAVRALQ

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory