Comparing WP_078718407.1 NCBI__GCF_900167125.1:WP_078718407.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
P9WKJ5 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
47% identity, 99% coverage: 2:552/554 of query aligns to 20:573/575 of P9WKJ5
6ovtA Crystal structure of ilvd from mycobacterium tuberculosis (see paper)
47% identity, 99% coverage: 2:552/554 of query aligns to 7:560/562 of 6ovtA
Q9LIR4 Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
42% identity, 99% coverage: 3:552/554 of query aligns to 57:605/608 of Q9LIR4
9jpiA The complex structure of dhad with aspterric acid (aa). (see paper)
42% identity, 99% coverage: 3:552/554 of query aligns to 19:567/570 of 9jpiA
8hs0A The mutant structure of dhad v178w (see paper)
42% identity, 99% coverage: 3:552/554 of query aligns to 19:567/570 of 8hs0A
8imuA Dihydroxyacid dehydratase (dhad) mutant-v497f (see paper)
40% identity, 99% coverage: 3:552/554 of query aligns to 16:520/523 of 8imuA
B5ZZ34 L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum bv. trifolii (strain WSM2304) (see 2 papers)
34% identity, 99% coverage: 1:550/554 of query aligns to 11:560/579 of B5ZZ34
9evvD His579leu variant of l-arabinonate dehydratase co-crystallized with 2- oxobutyrate (see paper)
34% identity, 99% coverage: 1:550/554 of query aligns to 7:556/575 of 9evvD
9evvA His579leu variant of l-arabinonate dehydratase co-crystallized with 2- oxobutyrate (see paper)
34% identity, 99% coverage: 1:550/554 of query aligns to 7:556/575 of 9evvA
5j85A Ser480ala mutant of l-arabinonate dehydratase (see paper)
34% identity, 99% coverage: 1:550/554 of query aligns to 8:557/576 of 5j85A
8ej0A Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mg (see paper)
35% identity, 99% coverage: 2:550/554 of query aligns to 3:549/568 of 8ej0A
8epzA Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn
35% identity, 99% coverage: 2:550/554 of query aligns to 4:550/569 of 8epzA
Q1JUQ1 L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense (see paper)
36% identity, 95% coverage: 1:527/554 of query aligns to 8:535/583 of Q1JUQ1
Q9A9Z2 D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) (Caulobacter crescentus) (see 2 papers)
33% identity, 96% coverage: 22:553/554 of query aligns to 38:577/595 of Q9A9Z2
5oynA Crystal structure of d-xylonate dehydratase in holo-form (see paper)
33% identity, 96% coverage: 22:553/554 of query aligns to 32:571/589 of 5oynA
7m3kA Crystal structure of galactonate dehydratase from brucella melitensis biovar abortus 2308
32% identity, 91% coverage: 22:523/554 of query aligns to 27:537/587 of 7m3kA
>WP_078718407.1 NCBI__GCF_900167125.1:WP_078718407.1
MRSKKMTGGLEKAPHRSLMHALGITREEMDRPLVGVCNAFNEVIPGHVHLRTIADAVKNG
VRMSGGTPMEFPAIGVCDGLAMNHEGMRFSLPSREIIADSIEIMATAHPFDALVCVTNCD
KIVPGMLMAMLRLNIPAVIVSGGPMLAGKQKKQVSDLITVFEGVGRVKRGDMSETELAEL
EECACPTCGSCSGMFTANTMNCLSEAIGLALPGNGTIPATAAARVRLAKQAGMAVMNLLE
QGITPRDIVTTDSVRNAVAMDMALGGSTNTVLHLPAVFHEAELELSLELFDEISRQVPNI
CKLSPAGHYHIEDLDAAGGIPAVMRRVADTGALHLDCLTVTGKTVGQNLDDLNADVLDPD
VIRPLDKAYSPQGGIAILRGNLAEQGCVVKQSAVAPEMMQRTGKARVFDSEEDAVEAILG
NGIKAGDVVVIRYEGPKGGPGMREMLTPTSAIAGMGLGESVALITDGRFSGGTRGAAIGH
VSPEAAEGGLIGLVREGDSIRIDIPERRIELLVDETELAQRRQNWTPLQKEVTSPFLRRY
AARVTSAATGGVMR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory