SitesBLAST
Comparing WP_079649158.1 NCBI__GCF_900167915.1:WP_079649158.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3jz4A Crystal structure of e. Coli NADP dependent enzyme (see paper)
39% identity, 98% coverage: 9:476/478 of query aligns to 14:479/481 of 3jz4A
- active site: N156 (= N150), K179 (= K173), E254 (= E247), C288 (= C281), E385 (= E380), E462 (= E459)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: P154 (= P148), W155 (= W149), K179 (= K173), A181 (= A175), S182 (≠ G176), A212 (≠ P205), G216 (≠ A209), G232 (= G225), S233 (= S226), I236 (≠ V229), C288 (= C281), K338 (≠ T331), E385 (= E380), F387 (= F382)
4cazA Crystal structure of betaine aldehyde dehydrogenase from pseudomonas aeruginosa in complex with nadh
38% identity, 98% coverage: 9:477/478 of query aligns to 10:481/489 of 4cazA
- active site: N152 (= N150), K175 (= K173), E251 (= E247), C285 (= C281), E386 (= E380), E463 (= E459)
- binding [[(2R,3S,4R,5R)-5-[(3R)-3-aminocarbonyl-3,4-dihydro-2H-pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanidyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphate: I148 (= I146), G149 (≠ T147), W151 (= W149), N152 (= N150), K175 (= K173), E178 (≠ G176), G208 (= G206), G212 (= G210), F226 (= F223), T227 (= T224), G228 (= G225), G229 (≠ S226), T232 (≠ V229), V236 (vs. gap), E251 (= E247), L252 (≠ M248), C285 (= C281), E386 (= E380), F388 (= F382)
2woxA Betaine aldehyde dehydrogenase from pseudomonas aeruginosa with NAD(p) h-catalytic thiol adduct. (see paper)
38% identity, 98% coverage: 9:477/478 of query aligns to 10:481/489 of 2woxA
- active site: N152 (= N150), K175 (= K173), E251 (= E247), C285 (= C281), E386 (= E380), E463 (= E459)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: I148 (= I146), G149 (≠ T147), W151 (= W149), N152 (= N150), K175 (= K173), S177 (≠ A175), E178 (≠ G176), G208 (= G206), G212 (= G210), F226 (= F223), T227 (= T224), G228 (= G225), G229 (≠ S226), T232 (≠ V229), V236 (vs. gap), E251 (= E247), L252 (≠ M248), C285 (= C281), E386 (= E380), F388 (= F382)
2wmeA Crystallographic structure of betaine aldehyde dehydrogenase from pseudomonas aeruginosa (see paper)
38% identity, 98% coverage: 9:477/478 of query aligns to 10:481/489 of 2wmeA
- active site: N152 (= N150), K175 (= K173), E251 (= E247), C285 (= C281), E386 (= E380), E463 (= E459)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G149 (≠ T147), W151 (= W149), K175 (= K173), S177 (≠ A175), E178 (≠ G176), G208 (= G206), G212 (= G210), F226 (= F223), G228 (= G225), G229 (≠ S226), T232 (≠ V229), V236 (vs. gap)
Q9HTJ1 NAD/NADP-dependent betaine aldehyde dehydrogenase; BADH; EC 1.2.1.8 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
38% identity, 98% coverage: 9:477/478 of query aligns to 11:482/490 of Q9HTJ1
- GAWN 150:153 (≠ TPWN 147:150) binding NADPH
- K162 (= K159) active site, Charge relay system
- KPSE 176:179 (≠ KPAG 173:176) binding NADPH
- G209 (= G206) binding NADPH
- GTST 230:233 (≠ STGV 226:229) binding NADPH
- E252 (= E247) active site, Proton acceptor
- C286 (= C281) binding covalent; modified: Cysteine sulfenic acid (-SOH)
- E387 (= E380) binding NADPH
- E464 (= E459) active site, Charge relay system
P25526 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli (strain K12) (see paper)
39% identity, 98% coverage: 9:476/478 of query aligns to 15:480/482 of P25526
4o6rA Crystal structure of a putative aldehyde dehydrogenase from burkholderia cenocepacia
38% identity, 96% coverage: 20:477/478 of query aligns to 21:478/489 of 4o6rA
- active site: N150 (= N150), K173 (= K173), E248 (= E247), C282 (= C281), E383 (= E380), E460 (= E459)
- binding adenosine monophosphate: I146 (= I146), V147 (≠ T147), K173 (= K173), G206 (= G206), G210 (= G210), Q211 (vs. gap), F224 (= F223), G226 (= G225), S227 (= S226), T230 (≠ V229), R233 (= R232)
O14293 Putative aldehyde dehydrogenase-like protein C9E9.09c; EC 1.2.1.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
35% identity, 96% coverage: 17:477/478 of query aligns to 37:496/503 of O14293
- S248 (= S226) modified: Phosphoserine
Sites not aligning to the query:
- 501 modified: Phosphoserine
6wsbA Crystal structure of a betaine aldehyde dehydrogenase from burkholderia pseudomallei bound to cofactor NAD (see paper)
39% identity, 96% coverage: 17:477/478 of query aligns to 20:480/489 of 6wsbA
- active site: N152 (= N150), E250 (= E247), C284 (= C281), E462 (= E459)
- binding nicotinamide-adenine-dinucleotide: I148 (= I146), G149 (≠ T147), A150 (≠ P148), W151 (= W149), N152 (= N150), K175 (= K173), E178 (≠ G176), G208 (= G206), G211 (≠ A209), A212 (≠ G210), F225 (= F223), T226 (= T224), G227 (= G225), G228 (≠ S226), T231 (≠ V229), V235 (vs. gap), E250 (= E247), L251 (≠ M248), G252 (= G249), C284 (= C281), E385 (= E380), F387 (= F382)
6fkuA Structure and function of aldehyde dehydrogenase from thermus thermophilus: an enzyme with an evolutionarily-distinct c-terminal arm (recombinant protein with shortened c-terminal, in complex with NADP) (see paper)
37% identity, 98% coverage: 2:469/478 of query aligns to 11:493/511 of 6fkuA
- active site: N159 (= N150), E261 (= E247), C295 (= C281), E483 (= E459)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: I155 (= I146), T156 (= T147), N159 (= N150), K182 (= K173), S184 (≠ A175), E185 (≠ G176), G214 (vs. gap), G215 (vs. gap), K216 (vs. gap), G220 (= G206), Q221 (≠ A207), F237 (= F223), T238 (= T224), G239 (= G225), S240 (= S226), V243 (= V229), E261 (= E247), L262 (≠ M248), C295 (= C281), R342 (≠ E327), F343 (≠ Q328), E404 (= E380), F406 (= F382)
4neaA 1.90 angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betb) from staphylococcus aureus in complex with NAD+ and bme-free cys289 (see paper)
36% identity, 95% coverage: 24:478/478 of query aligns to 39:495/505 of 4neaA
- active site: N166 (= N150), K189 (= K173), E264 (= E247), C298 (= C281), E399 (= E380), E476 (= E459)
- binding nicotinamide-adenine-dinucleotide: P164 (= P148), K189 (= K173), E192 (≠ G176), G222 (= G206), G226 (= G210), G242 (= G225), G243 (≠ S226), T246 (≠ V229), H249 (≠ R232), I250 (≠ L233), C298 (= C281), E399 (= E380), F401 (= F382)
7radA Crystal structure analysis of aldh1b1
37% identity, 95% coverage: 24:477/478 of query aligns to 34:487/493 of 7radA
- binding nicotinamide-adenine-dinucleotide: I158 (= I146), I159 (≠ T147), P160 (= P148), W161 (= W149), N162 (= N150), M167 (≠ I155), K185 (= K173), E188 (≠ G176), G218 (= G206), G222 (= G210), A223 (≠ R211), T237 (= T224), G238 (= G225), S239 (= S226), V242 (= V229), E261 (= E247), L262 (≠ M248), C295 (= C281), E392 (= E380), F394 (= F382)
- binding 3-(2-methoxyphenyl)-1-(4-phenylphenyl)-6,7,8,9-tetrahydro-5~{H}-imidazo[1,2-a][1,3]diazepine: L113 (vs. gap), E117 (≠ R104), F163 (= F151), E285 (≠ D271), F289 (= F275), N450 (≠ T438), V452 (= V441)
7mjdA Crystal structure analysis of aldh1b1
37% identity, 95% coverage: 24:477/478 of query aligns to 34:487/493 of 7mjdA
- binding nicotinamide-adenine-dinucleotide: I158 (= I146), I159 (≠ T147), P160 (= P148), W161 (= W149), N162 (= N150), M167 (≠ I155), K185 (= K173), E188 (≠ G176), G218 (= G206), G222 (= G210), F236 (= F223), T237 (= T224), G238 (= G225), S239 (= S226), V242 (= V229), E261 (= E247), L262 (≠ M248), C295 (= C281), E392 (= E380), F394 (= F382)
- binding 8-(2-methoxyphenyl)-10-(4-phenylphenyl)-1$l^{4},8-diazabicyclo[5.3.0]deca-1(7),9-diene: E117 (≠ R104), E285 (≠ D271), F289 (= F275), N450 (≠ T438), V452 (= V441)
7mjcA Crystal structure analysis of aldh1b1
37% identity, 95% coverage: 24:477/478 of query aligns to 34:487/493 of 7mjcA
- binding nicotinamide-adenine-dinucleotide: I158 (= I146), I159 (≠ T147), P160 (= P148), W161 (= W149), N162 (= N150), K185 (= K173), E188 (≠ G176), G218 (= G206), G222 (= G210), T237 (= T224), G238 (= G225), S239 (= S226), V242 (= V229), E261 (= E247), L262 (≠ M248), C295 (= C281), E392 (= E380), F394 (= F382)
4go4A Crystal structure of pnpe in complex with nicotinamide adenine dinucleotide
38% identity, 89% coverage: 53:477/478 of query aligns to 52:476/487 of 4go4A
- active site: N149 (= N150), K172 (= K173), E247 (= E247), C281 (= C281), E381 (= E380), E458 (= E459)
- binding nicotinamide-adenine-dinucleotide: I145 (= I146), V146 (≠ T147), W148 (= W149), N149 (= N150), F154 (≠ I155), K172 (= K173), G205 (= G206), G209 (= G210), Q210 (≠ R211), F223 (= F223), T224 (= T224), G225 (= G225), S226 (= S226), T229 (≠ V229), E247 (= E247), G249 (= G249), C281 (= C281), E381 (= E380), F383 (= F382)
8skfA Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (lattice translocation disorder)
37% identity, 96% coverage: 17:476/478 of query aligns to 28:488/497 of 8skfA
- binding calcium ion: T33 (≠ S22), I34 (≠ R23), D100 (≠ E90), V187 (≠ I177)
- binding nicotinamide-adenine-dinucleotide: I156 (= I146), G157 (≠ T147), A158 (≠ P148), W159 (= W149), K183 (= K173), E186 (≠ G176), G216 (= G206), G220 (= G210), T235 (= T224), G236 (= G225), G237 (≠ S226), S240 (≠ V229), K243 (≠ R232), E259 (= E247), C293 (= C281), F396 (= F382)
8vr1A Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (ctp bound)
37% identity, 96% coverage: 17:476/478 of query aligns to 19:479/488 of 8vr1A
8vr0A Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (gmp bound)
37% identity, 96% coverage: 17:476/478 of query aligns to 19:479/488 of 8vr0A
8vqzA Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (cmp bound)
37% identity, 96% coverage: 17:476/478 of query aligns to 19:479/488 of 8vqzA
8vqwC Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (coa bound)
37% identity, 96% coverage: 17:476/478 of query aligns to 19:479/488 of 8vqwC
- binding coenzyme a: I147 (= I146), W150 (= W149), K174 (= K173), S176 (≠ A175), E177 (≠ G176), G207 (= G206), G211 (= G210), F225 (= F223), G227 (= G225), G228 (≠ S226), S231 (≠ V229), H331 (≠ Q328), F387 (= F382)
Query Sequence
>WP_079649158.1 NCBI__GCF_900167915.1:WP_079649158.1
MTIVLSHRVGGERIGGGAAIESRNPSDLSDLVATTPEGDAALLDRAIAAAAAAQPDWAAR
SPEARGDILDRAAALLMERAGELGTLLSREEGKTLAEGKSEVMRAARILRYFGGEALRLH
GRAMASVRPGIDVATRQEPLGIVGLITPWNFPIAIPAWKAAPALAFGNAVVLKPAGITPA
IASALADVLEEAGLPPGLFNLVFVPGAVAGRMAEDARVAGLSFTGSTGVGRRLAVAAAAH
GKRIQLEMGGKNPLVVLDDADLDRAVAVALDGSFFGSGQRCTASSRLIVTDGIHDRFVAA
LTAAMAKLRVGHALDPDTQIGPVASEEQRATIEAYLAIAVEQGGGLACGGERVRRATDGY
FLAPALITGTSPEMRVNREEIFGPVASVVRVPDLDAAIAVANGSEFGLSAGIVTSSLAHA
SRFKASAQAGMVMVNAPTAGVDYHVPFGGTKASSLGPREQGFSAHEFYTRTKTIYVNA
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory