Comparing WP_083442092.1 NCBI__GCF_000969705.1:WP_083442092.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
P94529 Arabinooligosaccharides transport system permease protein AraP from Bacillus subtilis (strain 168) (see paper)
24% identity, 88% coverage: 14:279/304 of query aligns to 24:288/313 of P94529
7cagA Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state (see paper)
25% identity, 89% coverage: 28:297/304 of query aligns to 16:279/285 of 7cagA
P02916 Maltose/maltodextrin transport system permease protein MalF from Escherichia coli (strain K12) (see 4 papers)
21% identity, 79% coverage: 59:298/304 of query aligns to 260:510/514 of P02916
4ki0F Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to maltohexaose (see paper)
21% identity, 77% coverage: 59:293/304 of query aligns to 245:490/490 of 4ki0F
>WP_083442092.1 NCBI__GCF_000969705.1:WP_083442092.1
MYMAVDKAINRLPLTIAARVRPWAWAGPAVVVVAIYLIYPAVATIQLSFMDATGDNFIGF
DNYAYVFSDPAMLRSLRNTALWIFVVPAAAVSIGLGFAVLADKLTRAESVAKSIIFLPMA
ISFIGAGIVWRFVYSFRLDGAGEQIGILNAIKTGLGGAPVDWLAIVPWNNLMLMVIMIWL
QTGFAMVILSSAIKGVPSEMLEAGRLDGATEIQLFWRIVVPSIKSSIVVVFTTMVIGVLK
VFDIVWVMTGGQSGTEVIAERMIRNMFTFRHFGRGSAVAVFMFVAVIPVMIINVRRFREE
ELTR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory