Comparing WP_083442233.1 NCBI__GCF_000969705.1:WP_083442233.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
34% identity, 92% coverage: 20:290/294 of query aligns to 3:277/281 of P94530
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
30% identity, 84% coverage: 44:290/294 of query aligns to 30:292/296 of P68183
4ki0F Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to maltohexaose (see paper)
34% identity, 25% coverage: 156:228/294 of query aligns to 354:426/490 of 4ki0F
Sites not aligning to the query:
P02916 Maltose/maltodextrin transport system permease protein MalF from Escherichia coli (strain K12) (see 4 papers)
34% identity, 25% coverage: 156:228/294 of query aligns to 369:441/514 of P02916
Sites not aligning to the query:
7cagA Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state (see paper)
28% identity, 52% coverage: 68:220/294 of query aligns to 49:216/285 of 7cagA
Sites not aligning to the query:
>WP_083442233.1 NCBI__GCF_000969705.1:WP_083442233.1
MRTRPEETDAPPRATHRRTRRRPTVSSLAIGAVLWGYALVVVAPLLLVVLNSLRPTSEIF
ADPIALPERVSLDSYATAWTDANFGRYFFNSLGITIASVLLATTVSVLAAYPLGRYRFRG
SSALSLFFLSGLMLPFRLAILPLFLLLDGLNLVDTRSGLVLVYAATGIPFSVFILTAFFR
QLPGDLADAAAIDGAGEFQIFSRVMLPLVRPALSTVMVFQFVPLWNDFFFPLVLLRSSDK
WTLPVGMTRFFGEYQTDWSTLFAGLLIATLPLIVLFLAATRQIIAGLTAGIGKM
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory