Comparing WP_083818547.1 NCBI__GCF_000223395.1:WP_083818547.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
3mwbB The crystal structure of prephenate dehydratase in complex with l-phe from arthrobacter aurescens to 2.0a
37% identity, 80% coverage: 60:319/324 of query aligns to 4:271/303 of 3mwbB
3mwbA The crystal structure of prephenate dehydratase in complex with l-phe from arthrobacter aurescens to 2.0a
36% identity, 80% coverage: 60:319/324 of query aligns to 4:274/306 of 3mwbA
2qmxA The crystal structure of l-phe inhibited prephenate dehydratase from chlorobium tepidum tls (see paper)
33% identity, 82% coverage: 59:323/324 of query aligns to 4:277/278 of 2qmxA
P0A9J8 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli (strain K12)
30% identity, 82% coverage: 56:320/324 of query aligns to 103:376/386 of P0A9J8
Sites not aligning to the query:
6vh5D Crystal structure of prephenate dehydratase from brucella melitensis biovar abortus 2308 in complex with phenylalanine
32% identity, 81% coverage: 56:319/324 of query aligns to 6:276/282 of 6vh5D
7am0B Gqqa- a novel type of quorum quenching acylases (see paper)
29% identity, 81% coverage: 59:320/324 of query aligns to 4:270/278 of 7am0B
3luyA Putative chorismate mutase from bifidobacterium adolescentis
27% identity, 81% coverage: 58:320/324 of query aligns to 5:284/326 of 3luyA
7alzA Gqqa- a novel type of quorum quenching acylases (see paper)
32% identity, 34% coverage: 210:320/324 of query aligns to 72:186/194 of 7alzA
>WP_083818547.1 NCBI__GCF_000223395.1:WP_083818547.1
MVVGEELGRALRELIEAAVRLEEVARRVGPPPVPEDTPGWLRPALVRLVGLAAGGSPRVS
FLGPRGSFSHEAVRAVFGGAAREMPAHSISAAVTMLVEGVVDYAVVPYENSIEGPVGETL
RALAESADVVRVWAEYVHPIVLVLAARSDGEVRKVYGHPHALGEARDWLERNLPHAELIP
VASTSKAAEMAAREDGAAAVCSRLAAELYGLRIVAEGLATRPNFTRFLVLHHRDNPETGS
KTSIVAAVRHEPGSLYRLLEVFAERRINLTMIYSYPVPGSPWSYYFFIDMEGSRRDEKIR
EALEEAEKRALWLRVLGSYPVLHG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory