Comparing WP_084076482.1 NCBI__GCF_900129305.1:WP_084076482.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
3zyyX Reductive activator for corrinoid,iron-sulfur protein (see paper)
44% identity, 88% coverage: 72:703/718 of query aligns to 3:628/628 of 3zyyX
4c1nI Corrinoid protein reactivation complex with activator (see paper)
47% identity, 70% coverage: 198:703/718 of query aligns to 2:509/509 of 4c1nI
5ogxA Crystal structure of amycolatopsis cytochrome p450 reductase gcob. (see paper)
40% identity, 11% coverage: 79:155/718 of query aligns to 8:84/333 of 5ogxA
Sites not aligning to the query:
P0DPQ8 Aromatic O-demethylase, reductase subunit; NADH--hemoprotein reductase; EC 1.6.2.- from Amycolatopsis sp. (strain ATCC 39116 / 75iv2) (see paper)
40% identity, 11% coverage: 79:155/718 of query aligns to 9:85/334 of P0DPQ8
Sites not aligning to the query:
>WP_084076482.1 NCBI__GCF_900129305.1:WP_084076482.1
MPSPVKTRSLITHHSSLITHHSSRPPALSLRTTGIIRDATMILTGMWIRGRARKARSFPC
TIEETQMANRIKVTFQPENRVVEAGPGETLLDVAALAGIYINSLCGGQGVCGKCRLKVLS
GEVEFSSRGIGFLDRKEVDEGYVLACQSTLKDRDVEVWIPPESRREEEQILMVDNIVQYG
APSSQEAGAAPVPVPYYEPLCHKVFLKLPEPTLKDNLSDLERIYRALAQKFPDVKWEADF
ACLRNLARLLRDNHWEVTALVHALDSHCHHVRSLEPGDTTRNAYGVAVDVGTTTIVAQLV
DLKSSQVVGVEASHNQQARYGEDVISRMIYACGHGGLDPLKNAVVTTINTLVNSLVAGAG
IQHTDIISFVAAGNTTMTHLLLGLEPCTIRLEPYIPTATRIPWARAAEVGLTGHPDALLH
CMPCVSSYVGGDITAGVLACGMNDSPQLSALIDIGTNGEIVVGNNEWLVCCSASAGPAFE
GGGTKCGMRATKGAVQKVRIRGDRLEIQTIGGGKARGICGSGLIDCMAELVAEGIIDQSG
KFVRLDHPRVREVDGVPEFVLAKETESETGEPVVITEDDIGNLMKSKAAVLAAMKVLLES
LGLRFSDLDRLYVAGGFGAHLDIEKSIRIGLLPDVPREKVLFIGNSSLGGARQALLSTHA
YRKANAIARQMTYFELSVHPGFMDEFVAALFLPHTDQSLFPSVQEALKNRQREEALLK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory