Comparing WP_084217449.1 NCBI__GCF_000745855.1:WP_084217449.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4z9nB Abc transporter / periplasmic binding protein from brucella ovis with glutathione bound
55% identity, 90% coverage: 36:355/355 of query aligns to 3:324/324 of 4z9nB
1xt8B Crystal structure of cysteine-binding protein from campylobacter jejuni at 2.0 a resolution (see paper)
31% identity, 64% coverage: 40:265/355 of query aligns to 6:219/251 of 1xt8B
4zv1A An ancestral arginine-binding protein bound to arginine (see paper)
34% identity, 58% coverage: 47:253/355 of query aligns to 3:201/226 of 4zv1A
2v25A Structure of the campylobacter jejuni antigen peb1a, an aspartate and glutamate receptor with bound aspartate (see paper)
29% identity, 63% coverage: 41:265/355 of query aligns to 3:217/231 of 2v25A
4zv2A An ancestral arginine-binding protein bound to glutamine (see paper)
34% identity, 58% coverage: 47:253/355 of query aligns to 3:199/225 of 4zv2A
5t0wA Crystal structure of the ancestral amino acid-binding protein anccdt- 1, a precursor of cyclohexadienyl dehydratase
33% identity, 65% coverage: 40:270/355 of query aligns to 2:218/229 of 5t0wA
2ia4B Crystal structure of novel amino acid binding protein from shigella flexneri
28% identity, 74% coverage: 31:291/355 of query aligns to 2:277/278 of 2ia4B
2vhaA Debp (see paper)
28% identity, 74% coverage: 31:291/355 of query aligns to 1:276/276 of 2vhaA
8ovoA X-ray structure of the sf-iglusnfr-s72a in complex with l-aspartate
28% identity, 66% coverage: 37:272/355 of query aligns to 2:256/503 of 8ovoA
2yjpA Crystal structure of the solute receptors for l-cysteine of neisseria gonorrhoeae (see paper)
30% identity, 59% coverage: 40:249/355 of query aligns to 3:203/247 of 2yjpA
5eyfB Crystal structure of solute-binding protein from enterococcus faecium with bound glutamate
29% identity, 63% coverage: 41:265/355 of query aligns to 6:219/243 of 5eyfB
6h20A Glnh bound to asn, mycobacterium tuberculosis (see paper)
27% identity, 57% coverage: 35:235/355 of query aligns to 38:230/287 of 6h20A
6h1uA Glnh bound to asp, mycobacterium tuberculosis (see paper)
27% identity, 57% coverage: 35:235/355 of query aligns to 38:230/287 of 6h1uA
6h2tA Glnh bound to glu, mycobacterium tuberculosis (see paper)
27% identity, 57% coverage: 35:235/355 of query aligns to 39:231/288 of 6h2tA
6svfA Crystal structure of the p235gk mutant of argbp from t. Maritima (see paper)
28% identity, 63% coverage: 41:263/355 of query aligns to 3:213/229 of 6svfA
3k4uE Crystal structure of putative binding component of abc transporter from wolinella succinogenes dsm 1740 complexed with lysine
23% identity, 67% coverage: 47:284/355 of query aligns to 3:230/234 of 3k4uE
3vvfA Crystal structure of ttc0807 complexed with arginine (see paper)
23% identity, 59% coverage: 39:249/355 of query aligns to 8:206/241 of 3vvfA
3vveA Crystal structure of ttc0807 complexed with lysine (see paper)
23% identity, 59% coverage: 39:249/355 of query aligns to 8:206/241 of 3vveA
3vvdA Crystal structure of ttc0807 complexed with ornithine (see paper)
23% identity, 59% coverage: 39:249/355 of query aligns to 8:206/241 of 3vvdA
3vv5A Crystal structure of ttc0807 complexed with (s)-2-aminoethyl-l- cysteine (aec) (see paper)
23% identity, 59% coverage: 39:249/355 of query aligns to 4:202/237 of 3vv5A
>WP_084217449.1 NCBI__GCF_000745855.1:WP_084217449.1
MRGFPDEDYDMQKTKPLALAAAAFALAGLLAPAGAHAGKTLDAVKQRGSVKCGVTNGVAG
FSAPDTQGRWSGLDVDSCRAIAAAVLGDPQKVEFVPLNAQQRFAALQAGEIDILARNTTW
NLTRDASLGVSFTTINYYDGQGFLVPKKLKISSAKQLKGATICTQSGTTNEKNVAEWSKA
QGLPVKTVVFESFEASFKAFFSGRCQAFTTDTSALAGLRNKEAPNPDDYVILPELISKEP
LAPAVKRGDDEWFAIAKWVPNALIEAEELGITQANVDQLRADSKDPAQQRLLGTGDDLGK
LLGLDKDWSFRAIKAVGNYGEMFERNVGAKSALKLPRGANNLWNKGGLLYALPVK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory