Comparing WP_084472117.1 NCBI__GCF_000527155.1:WP_084472117.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 14 hits to proteins with known functional sites (download)
3dasA Structure of the pqq-bound form of aldose sugar dehydrogenase (adh) from streptomyces coelicolor
48% identity, 93% coverage: 23:343/344 of query aligns to 3:334/334 of 3dasA
3a9hA Crystal structure of pqq-dependent sugar dehydrogenase holo-form (see paper)
42% identity, 91% coverage: 31:344/344 of query aligns to 7:337/338 of 3a9hA
3a9gA Crystal structure of pqq-dependent sugar dehydrogenase apo-form (see paper)
42% identity, 91% coverage: 31:344/344 of query aligns to 7:337/338 of 3a9gA
2ismB Crystal structure of the putative oxidoreductase (glucose dehydrogenase) (ttha0570) from thermus theromophilus hb8
41% identity, 90% coverage: 30:340/344 of query aligns to 3:332/333 of 2ismB
7cdyA Crystal structure of glucose dehydrogenase
31% identity, 85% coverage: 34:327/344 of query aligns to 6:339/346 of 7cdyA
7cgzA Glucose dehydrogenase
31% identity, 85% coverage: 34:327/344 of query aligns to 6:314/321 of 7cgzA
1cq1A Soluble quinoprotein glucose dehydrogenase from acinetobacter calcoaceticus in complex with pqqh2 and glucose (see paper)
30% identity, 66% coverage: 22:249/344 of query aligns to 5:270/444 of 1cq1A
Sites not aligning to the query:
1c9uA Crystal structure of the soluble quinoprotein glucose dehydrogenase in complex with pqq (see paper)
30% identity, 66% coverage: 22:249/344 of query aligns to 5:270/444 of 1c9uA
Sites not aligning to the query:
1cruA Soluble quinoprotein glucose dehydrogenase from acinetobacter calcoaceticus in complex with pqq and methylhydrazine (see paper)
29% identity, 66% coverage: 22:249/344 of query aligns to 5:274/448 of 1cruA
Sites not aligning to the query:
P13650 Quinoprotein glucose dehydrogenase B; Glucose dehydrogenase B [pyrroloquinoline-quinone]; Soluble glucose dehydrogenase; s-GDH; EC 1.1.5.2 from Acinetobacter calcoaceticus (see paper)
29% identity, 66% coverage: 22:249/344 of query aligns to 29:300/478 of P13650
Sites not aligning to the query:
8re0A Quinoprotein glucose dehydrogenase B (see paper)
29% identity, 66% coverage: 22:249/344 of query aligns to 5:276/452 of 8re0A
Sites not aligning to the query:
P75804 Aldose sugar dehydrogenase YliI; Asd; Soluble aldose sugar dehydrogenase YliI; EC 1.1.5.- from Escherichia coli (strain K12) (see paper)
29% identity, 86% coverage: 31:326/344 of query aligns to 27:362/371 of P75804
5minB Apo form of the soluble pqq-dependent glucose dehydrogenase from acinetobacter calcoaceticus
30% identity, 66% coverage: 22:249/344 of query aligns to 5:276/453 of 5minB
Sites not aligning to the query:
2g8sA Crystal structure of the soluble aldose sugar dehydrogenase (asd) from escherichia coli in the apo-form (see paper)
29% identity, 86% coverage: 31:326/344 of query aligns to 5:340/348 of 2g8sA
>WP_084472117.1 NCBI__GCF_000527155.1:WP_084472117.1
MFTACTSEPDNEENATPSPEPTPSTTPQERTEVVSDNLDVPWSIAFYNETLLVSERDSTR
ILELDDEGEARSIGTIDAAVPNGEGGLLGLAVADGYLFTYFTADDENRIERRELSGEPGS
LEFGASETVVDGIPAAGHHNGGRIAIGPDGMLYVTTGDAGNTGNAQDLDSLAGKILRMTP
SGGVPDDNPFADSLVFSFGHRNPQGIAWADDGTLYSSEFGQDTWDELNVIEAGGNYGWPE
VEGVADRDGFIDPVQQWRPAEASPSGIEVYEGAVYIANLRGERLFEVPLSDPTTVTEHFV
GDYGRIRDVIVGNDGSLWMVTNNTDGRGDPSDTDDRIIRVNLEE
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory