SitesBLAST
Comparing WP_084933101.1 NCBI__GCF_002095475.1:WP_084933101.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P0AAH4 Putrescine export system ATP-binding protein SapD from Escherichia coli (strain K12) (see paper)
42% identity, 97% coverage: 1:319/328 of query aligns to 1:326/330 of P0AAH4
- K46 (= K46) mutation K->G,I,Q,R: 25% to 50% stimulation of K(+) uptake by TrkH.; mutation Missing: Almost no stimulation of K(+) uptake by TrkH.
- G162 (= G157) mutation to A: 80% stimulation of K(+) uptake by TrkH.
- Q165 (= Q160) mutation to L: 60% stimulation of K(+) uptake by TrkH.
- D183 (= D178) mutation to E: About 60% stimulation of K(+) uptake by TrkH.; mutation D->K,N: 15% to 20% stimulation of K(+) uptake by TrkH.
8j5qD Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- translocation state (see paper)
46% identity, 93% coverage: 3:307/328 of query aligns to 3:308/611 of 8j5qD
Sites not aligning to the query:
8j5tD Cryo-em structure of mycobacterium tuberculosis oppabcd in the catalytic intermediate state (see paper)
45% identity, 93% coverage: 3:307/328 of query aligns to 3:308/608 of 8j5tD
- binding adenosine-5'-triphosphate: F13 (= F13), S42 (= S42), G43 (= G43), G45 (= G45), K46 (= K46), S47 (= S47), A48 (≠ V48), Q95 (= Q96), R146 (= R146), E153 (≠ Q153), S155 (= S155), G157 (= G157), E158 (≠ M158), H212 (= H212)
- binding magnesium ion: S47 (= S47), Q95 (= Q96)
- binding iron/sulfur cluster: P248 (= P248), C285 (= C284), A288 (≠ N287), C291 (= C290), C298 (= C297)
Sites not aligning to the query:
- binding adenosine-5'-triphosphate: 358, 395, 396, 397, 398, 399, 400, 401, 444, 494, 498, 500, 502, 557
- binding magnesium ion: 400, 444
- binding iron/sulfur cluster: 316, 318
8j5sD Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- catalytic intermediate state (see paper)
45% identity, 93% coverage: 3:307/328 of query aligns to 3:308/608 of 8j5sD
- binding phosphoaminophosphonic acid-adenylate ester: F13 (= F13), V20 (≠ F20), A22 (= A22), E41 (= E41), S42 (= S42), G43 (= G43), S44 (= S44), G45 (= G45), K46 (= K46), S47 (= S47), A48 (≠ V48), Y60 (≠ P60), Q95 (= Q96), L278 (≠ K277)
- binding magnesium ion: S47 (= S47), Q95 (= Q96)
- binding iron/sulfur cluster: C285 (= C284), C291 (= C290), C298 (= C297)
Sites not aligning to the query:
- binding phosphoaminophosphonic acid-adenylate ester: 358, 375, 396, 397, 398, 399, 400, 401, 444
- binding magnesium ion: 400, 444
- binding iron/sulfur cluster: 316, 318
8xfcD Cryo-em structure of the atp-bound mtb dppabcd with the d445a mutation of dppa
46% identity, 79% coverage: 3:261/328 of query aligns to 4:257/517 of 8xfcD
Sites not aligning to the query:
8wdbD Cryo-em structure of the atp-bound dppabcd complex
46% identity, 79% coverage: 3:261/328 of query aligns to 3:256/513 of 8wdbD
- binding adenosine-5'-triphosphate: F13 (= F13), S39 (= S42), G40 (= G43), G42 (= G45), K43 (= K46), S44 (= S47), T45 (≠ V48), Q148 (= Q153), S150 (= S155), G152 (= G157), H207 (= H212)
- binding magnesium ion: S44 (= S47), Q93 (= Q96)
Sites not aligning to the query:
- binding adenosine-5'-triphosphate: 268, 303, 306, 307, 308, 309, 353, 404, 408, 410, 411, 412
- binding magnesium ion: 308, 353
Q8RDH4 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis) (see paper)
37% identity, 98% coverage: 3:324/328 of query aligns to 4:324/326 of Q8RDH4
- ASGKST 44:49 (≠ GSGKSV 43:48) binding ATP
- N61 (≠ P60) binding ATP
- Q97 (= Q96) binding ATP
- C285 (= C284) binding [4Fe-4S] cluster
- C291 (= C290) binding [4Fe-4S] cluster
- C298 (= C297) binding [4Fe-4S] cluster
- C316 (= C314) binding [4Fe-4S] cluster
4fwiB Crystal structure of the nucleotide-binding domain of a dipeptide abc transporter (see paper)
36% identity, 96% coverage: 3:316/328 of query aligns to 3:307/310 of 4fwiB
- binding adenosine-5'-triphosphate: Y13 (≠ F13), S42 (= S42), A43 (≠ G43), S44 (= S44), G45 (= G45), K46 (= K46), S47 (= S47), T48 (≠ V48), N60 (≠ P60), Q96 (= Q96)
- binding magnesium ion: S47 (= S47), Q96 (= Q96)
- binding iron/sulfur cluster: H247 (= H247), P248 (= P248), C274 (= C284), H277 (≠ N287), C280 (= C290), Y282 (= Y292), C287 (= C297), C305 (= C314), H306 (= H315)
7z18I E. Coli c-p lyase bound to a phnk abc dimer and atp (see paper)
35% identity, 78% coverage: 3:257/328 of query aligns to 3:247/250 of 7z18I
- binding adenosine-5'-triphosphate: Y13 (≠ F13), S38 (= S42), G39 (= G43), S40 (= S44), G41 (= G45), K42 (= K46), T43 (≠ S47), T44 (≠ V48), Q88 (= Q96), R136 (= R146), T143 (≠ Q153), S145 (= S155), G147 (= G157), M148 (= M158), H202 (= H212)
- binding magnesium ion: T43 (≠ S47), Q88 (= Q96)
7z15I E. Coli c-p lyase bound to a phnk/phnl dual abc dimer and adp + pi (see paper)
35% identity, 78% coverage: 3:257/328 of query aligns to 3:247/253 of 7z15I
- binding adenosine-5'-diphosphate: Y13 (≠ F13), K17 (≠ R21), G18 (≠ A22), S38 (= S42), G39 (= G43), G41 (= G45), K42 (= K46), T43 (≠ S47), T44 (≠ V48), R136 (= R146), T143 (≠ Q153), S145 (= S155), M148 (= M158)
- binding magnesium ion: T43 (≠ S47), Q88 (= Q96)
7z16I E. Coli c-p lyase bound to phnk/phnl dual abc dimer with amppnp and phnk e171q mutation (see paper)
34% identity, 78% coverage: 3:257/328 of query aligns to 3:247/250 of 7z16I
- binding phosphoaminophosphonic acid-adenylate ester: Y13 (≠ F13), K17 (≠ R21), S38 (= S42), G39 (= G43), S40 (= S44), G41 (= G45), K42 (= K46), T43 (≠ S47), T44 (≠ V48), R136 (= R146), T143 (≠ Q153), S145 (= S155), G147 (= G157), M148 (= M158), H202 (= H212)
3c4jA Abc protein artp in complex with atp-gamma-s
32% identity, 77% coverage: 1:254/328 of query aligns to 1:238/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
32% identity, 77% coverage: 1:254/328 of query aligns to 1:238/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
32% identity, 77% coverage: 1:254/328 of query aligns to 1:238/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
32% identity, 77% coverage: 1:254/328 of query aligns to 1:238/242 of 2oljA
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
34% identity, 77% coverage: 3:254/328 of query aligns to 2:236/241 of 4u00A