Comparing WP_084938021.1 NCBI__GCF_002095475.1:WP_084938021.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4z9nB Abc transporter / periplasmic binding protein from brucella ovis with glutathione bound
58% identity, 94% coverage: 21:341/341 of query aligns to 1:324/324 of 4z9nB
1xt8B Crystal structure of cysteine-binding protein from campylobacter jejuni at 2.0 a resolution (see paper)
30% identity, 62% coverage: 26:235/341 of query aligns to 5:206/251 of 1xt8B
2yjpA Crystal structure of the solute receptors for l-cysteine of neisseria gonorrhoeae (see paper)
27% identity, 65% coverage: 27:249/341 of query aligns to 3:217/247 of 2yjpA
2vhaA Debp (see paper)
29% identity, 62% coverage: 24:235/341 of query aligns to 4:217/276 of 2vhaA
2ia4B Crystal structure of novel amino acid binding protein from shigella flexneri
29% identity, 62% coverage: 24:235/341 of query aligns to 5:218/278 of 2ia4B
5t0wA Crystal structure of the ancestral amino acid-binding protein anccdt- 1, a precursor of cyclohexadienyl dehydratase
29% identity, 62% coverage: 26:235/341 of query aligns to 1:200/229 of 5t0wA
8ovoA X-ray structure of the sf-iglusnfr-s72a in complex with l-aspartate
29% identity, 62% coverage: 24:235/341 of query aligns to 2:215/503 of 8ovoA
4zv2A An ancestral arginine-binding protein bound to glutamine (see paper)
28% identity, 63% coverage: 34:249/341 of query aligns to 3:209/225 of 4zv2A
4zv1A An ancestral arginine-binding protein bound to arginine (see paper)
28% identity, 63% coverage: 34:249/341 of query aligns to 3:211/226 of 4zv1A
2v25A Structure of the campylobacter jejuni antigen peb1a, an aspartate and glutamate receptor with bound aspartate (see paper)
29% identity, 61% coverage: 28:235/341 of query aligns to 3:204/231 of 2v25A
6h2tA Glnh bound to glu, mycobacterium tuberculosis (see paper)
33% identity, 42% coverage: 13:155/341 of query aligns to 30:171/288 of 6h2tA
Sites not aligning to the query:
6h20A Glnh bound to asn, mycobacterium tuberculosis (see paper)
33% identity, 42% coverage: 13:155/341 of query aligns to 29:170/287 of 6h20A
Sites not aligning to the query:
6h1uA Glnh bound to asp, mycobacterium tuberculosis (see paper)
33% identity, 42% coverage: 13:155/341 of query aligns to 29:170/287 of 6h1uA
Sites not aligning to the query:
6svfA Crystal structure of the p235gk mutant of argbp from t. Maritima (see paper)
26% identity, 64% coverage: 28:246/341 of query aligns to 3:210/229 of 6svfA
5eyfB Crystal structure of solute-binding protein from enterococcus faecium with bound glutamate
25% identity, 56% coverage: 59:249/341 of query aligns to 38:220/243 of 5eyfB
9e2bC Structure of a solute binding protein from desulfonauticus sp. Bound to l-tryptophan
25% identity, 63% coverage: 26:239/341 of query aligns to 18:224/258 of 9e2bC
3k4uE Crystal structure of putative binding component of abc transporter from wolinella succinogenes dsm 1740 complexed with lysine
26% identity, 61% coverage: 34:240/341 of query aligns to 3:203/234 of 3k4uE
3vv5A Crystal structure of ttc0807 complexed with (s)-2-aminoethyl-l- cysteine (aec) (see paper)
24% identity, 61% coverage: 27:235/341 of query aligns to 5:202/237 of 3vv5A
3vvfA Crystal structure of ttc0807 complexed with arginine (see paper)
23% identity, 66% coverage: 27:251/341 of query aligns to 9:222/241 of 3vvfA
3vveA Crystal structure of ttc0807 complexed with lysine (see paper)
23% identity, 66% coverage: 27:251/341 of query aligns to 9:222/241 of 3vveA
>WP_084938021.1 NCBI__GCF_002095475.1:WP_084938021.1
MKKMMLSTLVAAASLLAVAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFTGI
DVDVCRAAAAAVFGDASKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFLFA
GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS
DESAKALDSGRCDTLSSDQSQLYALRVKLGKPDDFIVLPEVISKEPLGPVVRRGDDDWFT
IVKWSLFAMLNAEEMGINSKNVDQMAAKPTTPDMAHLLGAEGDFGKDLKLDNKWAYNIIK
QVGNYQEVFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory