Comparing WP_085121680.1 NCBI__GCF_900177295.1:WP_085121680.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P06721 Cystathionine beta-lyase MetC; CBL; CL; Beta-cystathionase MetC; Cysteine desulfhydrase MetC; CD; Cysteine lyase MetC; Cysteine-S-conjugate beta-lyase MetC; EC 4.4.1.13; EC 4.4.1.28 from Escherichia coli (strain K12) (see 2 papers)
47% identity, 96% coverage: 12:395/400 of query aligns to 7:394/395 of P06721
1cl1B Cystathionine beta-lyase (cbl) from escherichia coli (see paper)
47% identity, 96% coverage: 12:395/400 of query aligns to 4:391/392 of 1cl1B
2gqnA Cystathionine beta-lyase (cbl) from escherichia coli in complex with n-hydrazinocarbonylmethyl-2-nitro-benzamide (see paper)
47% identity, 96% coverage: 12:395/400 of query aligns to 3:390/391 of 2gqnA
2fq6A Cystathionine beta-lyase (cbl) from escherichia coli in complex with n-hydrazinocarbonylmethyl-2-trifluoromethyl-benzamide (see paper)
47% identity, 96% coverage: 12:395/400 of query aligns to 3:390/391 of 2fq6A
1cl2A Cystathionine beta-lyase (cbl) from escherichia coli in complex with aminoethoxyvinylglycine (see paper)
47% identity, 96% coverage: 12:395/400 of query aligns to 3:390/391 of 1cl2A
8sabA Crystal structure of cystathionine beta lyase from klebsiella aerogenes, plp adduct with alanine (c2 form)
47% identity, 96% coverage: 12:395/400 of query aligns to 4:391/392 of 8sabA
8u99A Crystal structure of cystathionine beta lyase from klebsiella aerogenes (plp-serine adduct)
47% identity, 96% coverage: 12:395/400 of query aligns to 3:390/391 of 8u99A
8u98A Crystal structure of cystathionine beta lyase from klebsiella aerogenes (plp-glycine adduct)
47% identity, 96% coverage: 12:395/400 of query aligns to 3:390/391 of 8u98A
8sa9A Crystal structure of cystathionine beta lyase from klebsiella aerogenes, plp-oxamate adduct (c2 form)
47% identity, 96% coverage: 12:395/400 of query aligns to 3:390/391 of 8sa9A
4itxA P113s mutant of e. Coli cystathionine beta-lyase metc inhibited by reaction with l-ala-p (see paper)
47% identity, 96% coverage: 12:395/400 of query aligns to 3:390/391 of 4itxA
8sadA Crystal structure of cystathionine beta lyase from klebsiella aerogenes, plp/malonate complex (c2 form)
47% identity, 96% coverage: 12:395/400 of query aligns to 10:397/398 of 8sadA
4l0oH Structure determination of cystathionine gamma-synthase from helicobacter pylori
39% identity, 84% coverage: 59:395/400 of query aligns to 34:373/373 of 4l0oH
4omaA The crystal structure of methionine gamma-lyase from citrobacter freundii in complex with l-cycloserine pyridoxal-5'-phosphate (see paper)
33% identity, 96% coverage: 12:394/400 of query aligns to 9:394/396 of 4omaA
3jwbA Crystal structure of l-methionine gamma-lyase from citrobacter freundii with norleucine (see paper)
33% identity, 96% coverage: 12:394/400 of query aligns to 9:394/396 of 3jwbA
3jwaA Crystal structure of l-methionine gamma-lyase from citrobacter freundii with methionine phosphinate (see paper)
33% identity, 96% coverage: 12:394/400 of query aligns to 9:394/396 of 3jwaA
3jw9A Crystal structure of l-methionine gamma-lyase from citrobacter freundii with s-ethyl-cysteine (see paper)
33% identity, 96% coverage: 12:394/400 of query aligns to 9:394/396 of 3jw9A
5m3zA Crystal structure of citrobacter freundii methionine gamma-lyase with c115h replacement in the complex with l-norleucine (see paper)
33% identity, 96% coverage: 12:394/400 of query aligns to 8:393/395 of 5m3zA
6egrA Crystal structure of citrobacter freundii methionine gamma-lyase with v358y replacement (see paper)
33% identity, 96% coverage: 12:394/400 of query aligns to 9:394/396 of 6egrA
4hf8A Crystal structure of l-methionine gamma-lyase from citrobacter freundii with glycine (see paper)
33% identity, 96% coverage: 12:394/400 of query aligns to 9:394/396 of 4hf8A
7mcyH Crystal structure of staphylococcus aureus cystathionine gamma lyase, holoenzyme with bound nl3 (see paper)
31% identity, 95% coverage: 16:395/400 of query aligns to 11:380/380 of 7mcyH
Sites not aligning to the query:
>WP_085121680.1 NCBI__GCF_900177295.1:WP_085121680.1
MTGKVKSGLQPDTILGHAGRDLTAHGGRAINPPVVRASTIVFDSLADWAAAAPRRMEPDF
VQYGRFGTPTHFALNDAIAKLEGAHAALCLPSGLAAIVVTYLAFLGPGDHALVADTVYAP
NRNTCTGLLARIGVETTFYDPSVGAGIAELIRPNTKLIFLEAPGSLTFEMQDVPAIAEAA
RARGVVTAIDNTWATPLYFRPLEVGVDVSLMAGTKYVVGHSDAMLGTLATTEAHYERIKK
TSHELGYAVGPDDAWLALRGLRTLSVRLARHHESGLEVARWLAARPEVARVFHPALPGDP
GHALWKRDFSGACGLFGFELKPVSEAAVAALVDGLELFGLGASWGGYESLVLPAHPEKLR
TAVPWDGKGPILRLHVGLEDPGDLIADLEAGFERLRAAGG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory