SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_085124648.1 NCBI__GCF_900177295.1:WP_085124648.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
29% identity, 64% coverage: 114:316/317 of query aligns to 87:295/296 of P68183

query
sites
P68183
N
 
N
S
 
S
L
 
V
I
 
K
I
 
V
G
 
A
F
 
G
G
 
I
S
 
S
T
 
A
V
 
I
F
 
G
A
 
I
V
 
V
A
 
A
L
 
L
G
 
S
T
 
T
F
 
T
A
 
C
A
 
A
Y
 
Y
G
 
A
F
 
F
S
 
A
R
 
R
F
 
M
K
 
R
V
 
F
P
 
P
L
 
G
A
 
K
D
 
A
D
 
T
L
 
L
L
 
L
F
 
K
F
 
G
I
 
M
L
 
L
S
 
I
T
 
F
R
 
Q
M
 
M
M
 
F
P
 
P
P
 
A
I
 
V
A
 
L
V
 
S
A
 
L
I
 
V
P
 
A
I
 
L
Y
 
Y
L
 
A
M
 
L
Y
 
F
R
 
D
E
 
R
L
 
L
G
 
G
L
 
E
S
 
Y
-
 
I
-
 
P
-
 
F
-
 
I
-
 
G
-
 
L
D
 
N
T
 
T
R
 
H
L
 
G
G
 
G
M
 
V
V
 
I
L
 
F
L
 
A
Y
 
Y
T
 
L
A
 
G
V
 
-
N
 
G
V
 
I
S
 
A
L
 
L
A
 
H
V
 
V
W
 
W
L
 
T
L
 
I
K
 
K
G
 
G
F
 
Y
I
 
F
D
 
E
E
 
T
I
 
I
P
 
D
R
 
S
E
 
S
Y
 
L
E
 
E
E
|
E
A
 
A
A
|
A
M
 
A
I
 
L
D
 
D
G
|
G
Y
 
A
S
 
T
R
 
P
L
 
W
R
 
Q
A
 
A
F
 
F
W
 
R
K
 
L
V
 
V
V
 
L
L
 
L
P
|
P
Q
 
L
A
 
S
T
 
V
T
 
P
G
 
I
I
 
L
A
 
A
A
 
V
T
 
V
A
 
F
I
 
I
F
 
L
C
 
S
L
 
F
I
 
I
F
 
A
A
 
A
W
 
I
N
 
T
E
 
E
Y
 
V
A
 
P
F
 
V
A
 
A
-
 
S
V
 
L
L
 
L
L
 
L
T
 
R
S
 
D
G
 
V
N
 
N
A
 
S
Q
 
Y
T
 
T
E
 
L
P
 
A
P
 
V
F
 
G
I
 
M
P
 
Q
I
 
Q
I
 
Y
I
 
L
G
 
N
E
 
P
G
 
Q
G
 
N
Q
 
Y
D
 
L
W
 
W
P
 
G
A
 
D
V
 
F
A
 
A
A
 
A
G
 
A
T
 
A
T
 
V
I
 
M
F
 
S
L
 
A
V
 
L
P
 
P
I
 
I
L
 
T
V
 
I
F
 
V
T
 
F
I
 
L
L
 
L
L
 
A
R
 
Q
K
 
R
H
 
W
L
 
L
L
 
V
R
 
N
G
 
G
I
 
L
T
 
T
F
 
A
G
 
G
A
 
G
V
 
V
R
 
K

P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
22% identity, 67% coverage: 104:316/317 of query aligns to 69:280/281 of P94530

query
sites
P94530
G
 
G
P
 
G
S
 
S
N
 
I
Y
 
Y
V
 
F
P
 
K
R
 
W
F
 
F
V
 
F
N
 
N
S
 
S
L
 
L
I
 
V
I
 
L
G
 
G
F
 
L
G
 
F
S
 
T
T
 
T
V
 
V
F
 
L
A
 
T
V
 
L
A
 
F
L
 
F
G
 
S
T
 
S
F
 
M
A
 
I
A
 
G
Y
 
Y
G
 
G
F
 
L
S
 
A
R
 
V
F
 
Y
K
 
D
V
 
F
P
 
K
L
 
G
A
 
R
D
 
N
D
 
I
L
 
I
L
 
F
F
 
V
F
 
L
I
 
V
L
 
L
S
 
I
T
 
I
R
 
M
M
 
M
M
 
V
P
 
P
P
 
L
I
 
E
A
 
V
V
 
M
A
 
M
I
 
L
P
 
P
I
 
L
Y
 
F
L
 
K
M
 
L
Y
 
T
R
 
V
E
 
G
L
 
L
G
 
H
L
 
L
S
 
I
D
 
D
T
 
S
R
 
Y
L
 
T
G
 
G
M
 
V
V
 
I
L
 
L
L
 
P
Y
 
F
T
 
I
A
 
V
V
 
S
N
 
P
V
 
V
S
 
-
L
 
-
A
 
A
V
 
V
W
 
F
L
 
F
L
 
F
K
 
R
G
 
Q
F
 
Y
I
 
A
D
 
L
E
 
G
I
 
L
P
 
P
R
 
R
E
 
D
Y
 
L
E
 
L
E
 
D
A
 
S
A
 
A
M
 
R
I
 
M
D
|
D
G
 
G
Y
 
C
S
 
T
R
 
E
L
 
F
R
 
G
A
 
I
F
 
F
W
 
F
K
 
R
V
 
I
V
 
M
L
 
A
P
 
P
Q
 
L
A
 
M
T
 
K
T
 
P
G
 
A
I
 
F
A
 
G
A
 
A
T
 
M
A
 
I
I
 
I
F
 
L
C
 
Q
L
 
S
I
 
L
F
 
N
A
 
S
W
 
W
N
 
N
E
 
N
Y
 
F
A
 
L
F
 
W
-
 
P
A
 
L
V
 
I
L
 
V
L
 
L
T
 
R
S
 
S
G
 
K
N
 
E
A
 
M
Q
 
F
T
 
T
E
 
L
P
 
P
P
 
I
F
 
G
I
 
L
P
 
S
I
 
S
I
 
L
I
 
L
G
 
S
E
 
P
G
 
Y
G
 
G
Q
 
N
D
 
N
W
 
Y
P
 
D
A
 
M
V
 
L
A
 
I
A
 
S
G
 
G
T
 
S
T
 
V
I
 
F
F
 
A
L
 
I
V
 
L
P
 
P
I
 
V
L
 
I
V
 
I
F
 
I
T
 
F
I
 
L
L
 
F
L
 
F
R
 
Q
K
 
K
H
 
Y
L
 
F
L
 
I
R
 
S
G
 
G
I
 
L
T
 
T
F
 
V
G
 
G
A
 
G
V
 
V
R
 
K

Query Sequence

>WP_085124648.1 NCBI__GCF_900177295.1:WP_085124648.1
MTSANAAHSVVAPRPLTQRLAGAAVILYALVTMIPLVWIGLTSFKSPEDSISYPPKLLFQ
PTLEGYCNLFTTRTRQTPEFIAKLPPATSTCEVISRSRNMVIAGPSNYVPRFVNSLIIGF
GSTVFAVALGTFAAYGFSRFKVPLADDLLFFILSTRMMPPIAVAIPIYLMYRELGLSDTR
LGMVLLYTAVNVSLAVWLLKGFIDEIPREYEEAAMIDGYSRLRAFWKVVLPQATTGIAAT
AIFCLIFAWNEYAFAVLLTSGNAQTEPPFIPIIIGEGGQDWPAVAAGTTIFLVPILVFTI
LLRKHLLRGITFGAVRR

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory