Comparing WP_085126662.1 NCBI__GCF_900177295.1:WP_085126662.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3ma0A Closed liganded crystal structure of xylose binding protein from escherichia coli (see paper)
43% identity, 88% coverage: 29:332/345 of query aligns to 5:307/313 of 3ma0A
4ywhA Crystal structure of an abc transporter solute binding protein (ipr025997) from actinobacillus succinogenes 130z (asuc_0499, target efi-511068) with bound d-xylose
39% identity, 89% coverage: 27:334/345 of query aligns to 4:310/310 of 4ywhA
3uugA Crystal structure of the periplasmic sugar binding protein chve (see paper)
34% identity, 88% coverage: 29:332/345 of query aligns to 5:328/329 of 3uugA
3urmA Crystal structure of the periplasmic sugar binding protein chve (see paper)
34% identity, 88% coverage: 29:332/345 of query aligns to 5:328/329 of 3urmA
4ys6A Crystal structure of an abc transporter solute binding protein (ipr025997) from clostridium phytofermentans (cphy_1585, target efi- 511156) with bound beta-d-glucose
34% identity, 88% coverage: 28:332/345 of query aligns to 2:323/324 of 4ys6A
4wwhA Crystal structure of an abc transporter solute binding protein (ipr025997) from mycobacterium smegmatis (msmeg_1704, target efi- 510967) with bound d-galactose
34% identity, 88% coverage: 29:332/345 of query aligns to 5:328/329 of 4wwhA
4rxuA Crystal structure of carbohydrate transporter solute binding protein caur_1924 from chloroflexus aurantiacus, target efi-511158, in complex with d-glucose
33% identity, 88% coverage: 27:328/345 of query aligns to 4:332/340 of 4rxuA
6s3tA P46, an immunodominant surface protein from mycoplasma hyopneumoniae (see paper)
28% identity, 70% coverage: 79:319/345 of query aligns to 65:372/374 of 6s3tA
Sites not aligning to the query:
6ruxA P46, an immunodominant surface protein from mycoplasma hyopneumoniae (see paper)
28% identity, 70% coverage: 79:319/345 of query aligns to 63:370/373 of 6ruxA
P23905 D-galactose/methyl-galactoside binding periplasmic protein MglB; D-galactose-binding periplasmic protein; GBP; D-galactose/D-glucose-binding protein; GGBP from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
30% identity, 82% coverage: 2:284/345 of query aligns to 4:299/332 of P23905
3ga5A X-ray structure of glucose/galactose receptor from salmonella typhimurium in complex with (2r)-glyceryl-beta-d-galactopyranoside (see paper)
31% identity, 69% coverage: 46:284/345 of query aligns to 16:274/305 of 3ga5A
Sites not aligning to the query:
1gcaA The 1.7 angstroms refined x-ray structure of the periplasmic glucose(slash)galactose receptor from salmonella typhimurium (see paper)
31% identity, 69% coverage: 46:284/345 of query aligns to 18:276/309 of 1gcaA
Sites not aligning to the query:
2ioyA Crystal structure of thermoanaerobacter tengcongensis ribose binding protein (see paper)
32% identity, 76% coverage: 31:293/345 of query aligns to 16:264/274 of 2ioyA
Sites not aligning to the query:
P0AEE5 D-galactose/methyl-galactoside binding periplasmic protein MglB; D-galactose-binding periplasmic protein; GBP; D-galactose/D-glucose-binding protein; GGBP from Escherichia coli (strain K12) (see 4 papers)
31% identity, 82% coverage: 2:284/345 of query aligns to 4:299/332 of P0AEE5
Sites not aligning to the query:
2gbpA Sugar and signal-transducer binding sites of the escherichia coli galactose chemoreceptor protein (see paper)
32% identity, 66% coverage: 58:284/345 of query aligns to 35:276/309 of 2gbpA