SitesBLAST
Comparing WP_085641493.1 NCBI__GCF_002115805.1:WP_085641493.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6lpiB Crystal structure of ahas holo-enzyme (see paper)
28% identity, 98% coverage: 3:525/531 of query aligns to 4:517/539 of 6lpiB
- active site: I27 (= I25), G29 (= G27), G30 (≠ V28), S31 (≠ H29), I32 (≠ N30), E53 (= E50), C76 (≠ I73), F115 (≠ L112), Q116 (≠ H113), E117 (≠ Q114), K165 (≠ I163), M256 (≠ Y251), A283 (≠ D278), V375 (≠ M380), G401 (= G406), M403 (≠ L408), D428 (= D433), N455 (= N460), A457 (≠ K462), L458 (= L463), L460 (≠ E465), V461 (≠ I466), Q464 (≠ E467)
- binding flavin-adenine dinucleotide: R155 (= R153), G212 (= G209), G213 (= G210), G214 (= G211), T236 (= T233), L237 (≠ Y234), M238 (≠ A235), L254 (vs. gap), M256 (≠ Y251), H257 (≠ L252), G276 (= G271), A277 (≠ T272), R278 (≠ T273), D280 (≠ S275), R282 (≠ V277), A283 (≠ D278), D300 (= D294), I301 (= I295), D319 (≠ R328), V320 (≠ T329), M380 (≠ Y385), G398 (≠ Y403)
- binding magnesium ion: D428 (= D433), N455 (= N460)
- binding thiamine diphosphate: E53 (= E50), C76 (≠ I73), P79 (= P76), G376 (≠ T381), Q377 (= Q382), H378 (≠ F383), G401 (= G406), M403 (≠ L408), G427 (= G432), D428 (= D433), G429 (≠ Y434), S430 (≠ G435), M433 (≠ Y438), N455 (= N460), A457 (≠ K462), L458 (= L463), G459 (= G464), L460 (≠ E465), V461 (≠ I466)
1jscA Crystal structure of the catalytic subunit of yeast acetohydroxyacid synthase: a target for herbicidal inhibitors (see paper)
28% identity, 98% coverage: 7:525/531 of query aligns to 12:536/541 of 1jscA
- active site: Y31 (≠ I25), G33 (= G27), G34 (≠ V28), A35 (≠ H29), I36 (≠ N30), E57 (= E50), T80 (≠ I73), F119 (≠ H113), Q120 (= Q114), E121 (≠ M115), K169 (≠ I163), M263 (vs. gap), V290 (≠ P282), V406 (≠ M380), G432 (= G406), M434 (≠ L408), D459 (= D433), N486 (= N460), E488 (≠ D468)
- binding dihydrogenphosphate ion: G33 (= G27), G34 (≠ V28), Q120 (= Q114)
- binding flavin-adenine dinucleotide: R159 (= R153), G216 (= G209), A217 (≠ G210), G218 (= G211), N221 (≠ A214), T243 (≠ P245), L244 (= L246), L261 (vs. gap), G262 (vs. gap), H264 (vs. gap), G283 (= G271), A284 (≠ T272), R285 (≠ T273), D287 (≠ S275), R289 (= R281), V290 (≠ P282), E316 (≠ D294), V317 (≠ I295), N321 (≠ V299), G334 (≠ A312), D335 (= D313), A336 (= A314)
- binding magnesium ion: D459 (= D433), N486 (= N460)
- binding thiamine diphosphate: Y31 (≠ I25), P32 (= P26), E57 (= E50), P83 (= P76), V406 (≠ M380), G407 (≠ T381), Q408 (= Q382), H409 (≠ F383), M434 (≠ L408), D459 (= D433), A460 (≠ Y434), S461 (≠ G435), N486 (= N460)
Sites not aligning to the query:
5wkcA Saccharomyces cerevisiae acetohydroxyacid synthase in complex with the herbicide penoxsulam (see paper)
28% identity, 98% coverage: 7:525/531 of query aligns to 10:547/591 of 5wkcA
- active site: Y29 (≠ I25), G31 (= G27), G32 (≠ V28), A33 (≠ H29), I34 (≠ N30), E55 (= E50), T78 (≠ I73), F117 (≠ H113), Q118 (= Q114), E119 (≠ M115), K167 (≠ I163), R222 (≠ D221), M258 (vs. gap), V285 (≠ P282), V401 (≠ M380), L426 (≠ F405), G427 (= G406), M429 (≠ L408), D454 (= D433), N481 (= N460), E483 (≠ K462), Q484 (≠ L463), M486 (≠ E465), V487 (≠ I466), W490 (vs. gap), L512 (= L490), G517 (= G495), L518 (≠ A496)
- binding 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-[(1~{S})-1-(dioxidanyl)-1-oxidanyl-ethyl]-4-methyl-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate: V401 (≠ M380), G402 (≠ T381), Q403 (= Q382), H404 (≠ F383), G427 (= G406), M429 (≠ L408), G453 (= G432), D454 (= D433), A455 (≠ Y434), S456 (≠ G435), M459 (≠ Y438), N481 (= N460), E483 (≠ K462), Q484 (≠ L463), G485 (= G464), M486 (≠ E465), V487 (≠ I466)
- binding ethaneperoxoic acid: G32 (≠ V28), Q118 (= Q114)
- binding flavin-adenine dinucleotide: R157 (= R153), G211 (= G209), A212 (≠ G210), G213 (= G211), N216 (≠ A214), T238 (≠ P245), L239 (= L246), Q240 (≠ Y247), L256 (vs. gap), M258 (vs. gap), G278 (= G271), A279 (≠ T272), R280 (≠ T273), R284 (= R281), V285 (≠ P282), E311 (≠ D294), V312 (≠ I295), N316 (≠ V299), D330 (= D313), A331 (= A314), M406 (≠ Y385), G424 (≠ Y403)
- binding magnesium ion: D454 (= D433), N481 (= N460), E483 (≠ K462)
- binding 2-(2,2-difluoroethoxy)-N-(5,8-dimethoxy[1,2,4]triazolo[1,5-c]pyrimidin-2-yl)-6-(trifluoromethyl)benzenesulfonamide: G32 (≠ V28), A33 (≠ H29), V107 (≠ L102), F117 (≠ H113), K167 (≠ I163), M258 (vs. gap), R284 (= R281), M486 (≠ E465), W490 (vs. gap)
- binding (3z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate: P30 (= P26), E55 (= E50)
Sites not aligning to the query:
1t9cA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, sulfometuron methyl (see paper)
28% identity, 98% coverage: 7:525/531 of query aligns to 10:552/596 of 1t9cA
- active site: Y29 (≠ I25), G31 (= G27), G32 (≠ V28), A33 (≠ H29), I34 (≠ N30), E55 (= E50), T78 (≠ I73), F117 (≠ H113), Q118 (= Q114), E119 (≠ M115), K167 (≠ I163), R227 (≠ D221), M263 (vs. gap), V290 (≠ P282), V406 (≠ M380), L431 (≠ F405), G432 (= G406), M434 (≠ L408), D459 (= D433), N486 (= N460), E488 (≠ K462), Q489 (≠ L463), M491 (≠ E465), V492 (≠ I466), W495 (vs. gap), L517 (= L490), G522 (= G495), L523 (≠ A496)
- binding methyl 2-[({[(4,6-dimethylpyrimidin-2-yl)amino]carbonyl}amino)sulfonyl]benzoate: G32 (≠ V28), V107 (≠ L102), P108 (≠ E104), F117 (≠ H113), K167 (≠ I163), D288 (≠ E276), R289 (= R281), W495 (vs. gap)
- binding flavin-adenine dinucleotide: R157 (= R153), G216 (= G209), A217 (≠ G210), G218 (= G211), N221 (≠ A214), T243 (≠ P245), L244 (= L246), Q245 (≠ Y247), L261 (vs. gap), M263 (vs. gap), H264 (vs. gap), G283 (= G271), A284 (≠ T272), R285 (≠ T273), D287 (≠ S275), R289 (= R281), V290 (≠ P282), E316 (≠ D294), V317 (≠ I295), N321 (≠ V299), G334 (≠ A312), D335 (= D313), A336 (= A314), M411 (≠ Y385), G429 (≠ Y403), G430 (= G404)
- binding magnesium ion: D459 (= D433), N486 (= N460), E488 (≠ K462)
Sites not aligning to the query:
1n0hA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorimuron ethyl (see paper)
28% identity, 98% coverage: 7:525/531 of query aligns to 12:555/599 of 1n0hA
- active site: Y31 (≠ I25), G33 (= G27), G34 (≠ V28), A35 (≠ H29), I36 (≠ N30), E57 (= E50), T80 (≠ I73), F119 (≠ H113), Q120 (= Q114), E121 (≠ M115), K169 (≠ I163), R230 (≠ D221), M266 (vs. gap), V293 (≠ P282), V409 (≠ M380), L434 (≠ F405), G435 (= G406), M437 (≠ L408), D462 (= D433), N489 (= N460), E491 (≠ K462), Q492 (≠ L463), M494 (≠ E465), V495 (≠ I466), W498 (vs. gap), L520 (= L490), G525 (= G495), L526 (≠ A496)
- binding 4-{[(4'-amino-2'-methylpyrimidin-5'-yl)methyl]amino}pent-3-enyl diphosphate: V409 (≠ M380), G410 (≠ T381), Q411 (= Q382), H412 (≠ F383), G435 (= G406), M437 (≠ L408), G461 (= G432), D462 (= D433), A463 (≠ Y434), S464 (≠ G435), M467 (≠ Y438), N489 (= N460), E491 (≠ K462), Q492 (≠ L463), G493 (= G464), V495 (≠ I466)
- binding 2-[[[[(4-chloro-6-methoxy-2-pyrimidinyl)amino]carbonyl]amino]sulfonyl]benzoic acid ethyl ester: G34 (≠ V28), A35 (≠ H29), V109 (≠ L102), P110 (≠ E104), F119 (≠ H113), K169 (≠ I163), M266 (vs. gap), D291 (≠ E276), R292 (= R281), V495 (≠ I466), W498 (vs. gap)
- binding flavin-adenine dinucleotide: R159 (= R153), G219 (= G209), A220 (≠ G210), G221 (= G211), N224 (≠ A214), T246 (≠ P245), L247 (= L246), Q248 (≠ Y247), L264 (vs. gap), G265 (vs. gap), M266 (vs. gap), H267 (vs. gap), G286 (= G271), A287 (≠ T272), R288 (≠ T273), D290 (≠ S275), R292 (= R281), V293 (≠ P282), E319 (≠ D294), V320 (≠ I295), N324 (≠ V299), G337 (≠ A312), D338 (= D313), A339 (= A314), M414 (≠ Y385), G432 (≠ Y403), G433 (= G404)
- binding magnesium ion: D462 (= D433), N489 (= N460), E491 (≠ K462)
- binding thiamine diphosphate: Y31 (≠ I25), E57 (= E50), P83 (= P76)
Sites not aligning to the query:
8xodA BbmA-G484F complex with CBOA
28% identity, 97% coverage: 10:525/531 of query aligns to 10:516/532 of 8xodA
- binding 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-[(~{R})-cyclobutyl(oxidanyl)methyl]-4-methyl-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate: G28 (≠ V28), E51 (= E50), P77 (= P76), S371 (≠ Q382), M397 (≠ L408), G421 (= G432), D422 (= D433), A423 (≠ Y434), A424 (≠ G435), N449 (= N460), H452 (≠ L463), G453 (= G464), L454 (≠ E465)
- binding adenosine-5'-diphosphate: R158 (= R153), G215 (= G209), H216 (≠ G210), G217 (= G211), A221 (≠ V213), T241 (= T233), G283 (= G271), S284 (≠ T272), S285 (≠ T273), Q290 (≠ E276), D308 (= D294), I309 (= I295), E313 (≠ V299), A328 (= A314)
- binding magnesium ion: D422 (= D433), N449 (= N460)
1t9dA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, metsulfuron methyl (see paper)
28% identity, 98% coverage: 7:525/531 of query aligns to 10:552/596 of 1t9dA
- active site: Y29 (≠ I25), G31 (= G27), G32 (≠ V28), A33 (≠ H29), I34 (≠ N30), E55 (= E50), T78 (≠ I73), F117 (≠ H113), Q118 (= Q114), E119 (≠ M115), K167 (≠ I163), R227 (≠ D221), M263 (vs. gap), V290 (≠ P282), V406 (≠ M380), L431 (≠ F405), G432 (= G406), M434 (≠ L408), D459 (= D433), N486 (= N460), E488 (≠ K462), Q489 (≠ L463), M491 (≠ E465), V492 (≠ I466), W495 (vs. gap), L517 (= L490), G522 (= G495), L523 (≠ A496)
- binding methyl 2-[({[(4-methoxy-6-methyl-1,3,5-triazin-2-yl)amino]carbonyl}amino)sulfonyl]benzoate: G32 (≠ V28), A33 (≠ H29), V107 (≠ L102), P108 (≠ E104), F117 (≠ H113), K167 (≠ I163), M263 (vs. gap), D288 (≠ E276), R289 (= R281), W495 (vs. gap)
- binding flavin-adenine dinucleotide: R157 (= R153), G216 (= G209), A217 (≠ G210), G218 (= G211), N221 (≠ A214), T243 (≠ P245), L244 (= L246), Q245 (≠ Y247), M260 (≠ I260), L261 (vs. gap), H264 (vs. gap), G283 (= G271), A284 (≠ T272), R285 (≠ T273), D287 (≠ S275), R289 (= R281), V290 (≠ P282), E316 (≠ D294), V317 (≠ I295), N321 (≠ V299), G334 (≠ A312), D335 (= D313), A336 (= A314), Q410 (≠ A384), M411 (≠ Y385), G429 (≠ Y403), G430 (= G404)
- binding magnesium ion: D459 (= D433), N486 (= N460), E488 (≠ K462)
- binding 2,5-dimethyl-pyrimidin-4-ylamine: E55 (= E50), P81 (= P76), Q118 (= Q114), G432 (= G406), M434 (≠ L408), M464 (≠ Y438)
Sites not aligning to the query:
6bd9A Saccharomyces cerevisiae acetohydroxyacid synthase
28% identity, 98% coverage: 7:525/531 of query aligns to 12:537/542 of 6bd9A
- active site: Y31 (≠ I25), G33 (= G27), G34 (≠ V28), A35 (≠ H29), I36 (≠ N30), E57 (= E50), T80 (≠ I73), F119 (≠ H113), Q120 (= Q114), E121 (≠ M115), K169 (≠ I163), R228 (≠ D221), M264 (vs. gap), V291 (≠ P282), V407 (≠ M380), L432 (≠ F405), G433 (= G406), M435 (≠ L408), D460 (= D433), N487 (= N460), E489 (≠ D468), L502 (= L490), G507 (= G495), L508 (≠ A496)
- binding flavin-adenine dinucleotide: R159 (= R153), G217 (= G209), A218 (≠ G210), G219 (= G211), N222 (≠ A214), T244 (≠ P245), L245 (= L246), L262 (vs. gap), G263 (vs. gap), H265 (vs. gap), G284 (= G271), A285 (≠ T272), R286 (≠ T273), D288 (≠ S275), R290 (= R281), V291 (≠ P282), E317 (≠ D294), V318 (≠ I295), N322 (≠ V299), G335 (≠ A312), D336 (= D313), A337 (= A314)
- binding magnesium ion: D460 (= D433), N487 (= N460)
- binding oxygen molecule: G34 (≠ V28), T80 (≠ I73), Q120 (= Q114), A461 (≠ Y434), Q494 (≠ S473)
- binding pyruvic acid: G33 (= G27), G34 (≠ V28), G34 (≠ V28), A35 (≠ H29), Q120 (= Q114)
- binding thiamine diphosphate: P32 (= P26), E57 (= E50), V407 (≠ M380), G408 (≠ T381), Q409 (= Q382), H410 (≠ F383), G433 (= G406), M435 (≠ L408), G459 (= G432), D460 (= D433), A461 (≠ Y434), S462 (≠ G435), M465 (≠ Y438), N487 (= N460)
Sites not aligning to the query:
8x3xB Thdp-dependent hka synthase
28% identity, 97% coverage: 10:525/531 of query aligns to 9:515/537 of 8x3xB
- binding adenosine-5'-diphosphate: R157 (= R153), G214 (= G209), H215 (≠ G210), C219 (≠ S212), A220 (≠ V213), T240 (= T233), K242 (≠ A235), G282 (= G271), S283 (≠ T272), S284 (≠ T273), Q289 (≠ E276), D307 (= D294), I308 (= I295), D326 (= D313), A327 (= A314)
- binding 3-(4-hydroxy-phenyl)pyruvic acid: G27 (≠ V28), M30 (≠ V31), V454 (≠ I466), G457 (vs. gap), Q461 (≠ M470)
- binding magnesium ion: D421 (= D433), N448 (= N460), G450 (≠ K462)
- binding thiamine diphosphate: E50 (= E50), T73 (≠ I73), S370 (≠ Q382), M396 (≠ L408), G420 (= G432), D421 (= D433), A422 (≠ Y434), A423 (≠ G435), N448 (= N460), G450 (≠ K462), H451 (≠ L463), G452 (= G464), L453 (≠ E465)
Sites not aligning to the query:
1t9aA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, tribenuron methyl (see paper)
28% identity, 98% coverage: 7:525/531 of query aligns to 11:553/597 of 1t9aA
- active site: Y30 (≠ I25), G32 (= G27), G33 (≠ V28), A34 (≠ H29), I35 (≠ N30), E56 (= E50), T79 (≠ I73), F118 (≠ H113), Q119 (= Q114), E120 (≠ M115), K168 (≠ I163), R228 (≠ D221), M264 (vs. gap), V291 (≠ P282), V407 (≠ M380), L432 (≠ F405), G433 (= G406), M435 (≠ L408), D460 (= D433), N487 (= N460), E489 (≠ K462), Q490 (≠ L463), M492 (≠ E465), V493 (≠ I466), W496 (vs. gap), L518 (= L490), G523 (= G495), L524 (≠ A496)
- binding methyl 2-[4-methoxy-6-methyl-1,3,5-trazin-2-yl(methyl)carbamoylsulfamoyl]benzoate: G33 (≠ V28), V108 (≠ L102), P109 (≠ E104), F118 (≠ H113), K168 (≠ I163), M264 (vs. gap), D289 (≠ E276), R290 (= R281), M492 (≠ E465), V493 (≠ I466), W496 (vs. gap)
- binding flavin-adenine dinucleotide: R158 (= R153), G217 (= G209), A218 (≠ G210), G219 (= G211), N222 (≠ A214), T244 (≠ P245), L245 (= L246), Q246 (≠ Y247), L262 (vs. gap), M264 (vs. gap), H265 (vs. gap), G284 (= G271), A285 (≠ T272), R286 (≠ T273), D288 (≠ S275), R290 (= R281), V291 (≠ P282), E317 (≠ D294), V318 (≠ I295), N322 (≠ V299), G335 (≠ A312), D336 (= D313), A337 (= A314), Q411 (≠ A384), M412 (≠ Y385), G430 (≠ Y403), G431 (= G404)
- binding magnesium ion: D460 (= D433), N487 (= N460), E489 (≠ K462)
- binding propyl trihydrogen diphosphate: V407 (≠ M380), G408 (≠ T381), Q409 (= Q382), H410 (≠ F383), M435 (≠ L408), G459 (= G432), D460 (= D433), A461 (≠ Y434), S462 (≠ G435), N487 (= N460), E489 (≠ K462), Q490 (≠ L463), G491 (= G464), M492 (≠ E465)
- binding 5-{[ethyl(methyl)amino]methyl}-2-methyl-5,6-dihydropyrimidin-4-amine: G433 (= G406), M435 (≠ L408), M465 (≠ Y438)
Sites not aligning to the query:
1t9bB Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorsulfuron (see paper)
27% identity, 98% coverage: 7:525/531 of query aligns to 10:551/595 of 1t9bB
- active site: Y29 (≠ I25), G31 (= G27), G32 (≠ V28), A33 (≠ H29), I34 (≠ N30), E55 (= E50), T78 (≠ I73), F117 (≠ H113), Q118 (= Q114), E119 (≠ M115), K167 (≠ I163), R226 (≠ D221), M262 (vs. gap), V289 (≠ P282), V405 (≠ M380), L430 (≠ F405), G431 (= G406), M433 (≠ L408), D458 (= D433), N485 (= N460), E487 (≠ K462), Q488 (≠ L463), M490 (≠ E465), V491 (≠ I466), W494 (vs. gap), L516 (= L490), G521 (= G495), L522 (≠ A496)
- binding 1-(2-chlorophenylsulfonyl)-3-(4-methoxy-6-methyl-l,3,5-triazin-2-yl)urea: V107 (≠ L102), P108 (≠ E104), D287 (≠ E276), R288 (= R281), M490 (≠ E465), W494 (vs. gap)
- binding flavin-adenine dinucleotide: R157 (= R153), G215 (= G209), A216 (≠ G210), G217 (= G211), N220 (≠ A214), T242 (≠ P245), L243 (= L246), Q244 (≠ Y247), M259 (≠ I260), L260 (vs. gap), M262 (vs. gap), H263 (vs. gap), G282 (= G271), A283 (≠ T272), R284 (≠ T273), D286 (≠ S275), R288 (= R281), V289 (≠ P282), E315 (≠ D294), V316 (≠ I295), N320 (≠ V299), G333 (≠ A312), D334 (= D313), A335 (= A314), Q409 (≠ A384), M410 (≠ Y385), G428 (≠ Y403), G429 (= G404)
- binding magnesium ion: D458 (= D433), N485 (= N460), E487 (≠ K462)
Sites not aligning to the query:
5imsA Saccharomyces cerevisiae acetohydroxyacid synthase
28% identity, 98% coverage: 7:525/531 of query aligns to 12:537/541 of 5imsA
- active site: Y31 (≠ I25), G33 (= G27), G34 (≠ V28), A35 (≠ H29), I36 (≠ N30), E57 (= E50), T80 (≠ I73), F119 (≠ H113), Q120 (= Q114), E121 (≠ M115), K169 (≠ I163), R229 (≠ D221), M265 (vs. gap), V292 (≠ P282), V408 (≠ M380), L433 (≠ F405), G434 (= G406), M436 (≠ L408), D461 (= D433), N488 (= N460), E490 (≠ K462), L502 (= L490), G507 (= G495), L508 (≠ A496)
- binding flavin-adenine dinucleotide: R159 (= R153), G218 (= G209), A219 (≠ G210), G220 (= G211), N223 (≠ A214), T245 (≠ P245), L246 (= L246), L263 (vs. gap), G264 (vs. gap), H266 (vs. gap), G285 (= G271), A286 (≠ T272), R287 (≠ T273), D289 (≠ S275), R291 (= R281), V292 (≠ P282), E318 (≠ D294), V319 (≠ I295), N323 (≠ V299), D337 (= D313), A338 (= A314)
- binding magnesium ion: D461 (= D433), N488 (= N460)
- binding oxygen molecule: G34 (≠ V28), T80 (≠ I73), Q120 (= Q114)
- binding thiamine diphosphate: P32 (= P26), E57 (= E50), V408 (≠ M380), G409 (≠ T381), Q410 (= Q382), H411 (≠ F383), G434 (= G406), M436 (≠ L408), G460 (= G432), D461 (= D433), A462 (≠ Y434), S463 (≠ G435), M466 (≠ Y438), N488 (= N460)
Sites not aligning to the query:
6u9dB Saccharomyces cerevisiae acetohydroxyacid synthase (see paper)
27% identity, 98% coverage: 7:525/531 of query aligns to 14:563/607 of 6u9dB
- active site: Y33 (≠ I25), G35 (= G27), G36 (≠ V28), A37 (≠ H29), I38 (≠ N30), E59 (= E50), T82 (≠ I73), F121 (≠ H113), Q122 (= Q114), E123 (≠ M115), K171 (≠ I163), M274 (vs. gap), V301 (≠ P282), V417 (≠ M380), G443 (= G406), M445 (≠ L408), D470 (= D433), N497 (= N460), E499 (≠ K462), Q500 (≠ L463), M502 (≠ E465), V503 (≠ I466), W506 (vs. gap)
- binding methyl 2-[(4,6-dimethoxypyrimidin-2-yl)carbamoylsulfamoylmethyl]benzoate: G36 (≠ V28), V111 (≠ L102), P112 (≠ E104), F121 (≠ H113), K171 (≠ I163), D299 (≠ E276), R300 (= R281), M502 (≠ E465), W506 (vs. gap)
- binding flavin-adenine dinucleotide: R161 (= R153), A228 (≠ G210), G229 (= G211), N232 (≠ A214), T254 (≠ P245), L255 (= L246), Q256 (≠ Y247), L272 (vs. gap), M274 (vs. gap), G294 (= G271), R296 (≠ T273), D298 (≠ S275), R300 (= R281), V301 (≠ P282), E327 (≠ D294), V328 (≠ I295), N332 (≠ V299), D346 (= D313), A347 (= A314), M422 (≠ Y385), G440 (≠ Y403), G441 (= G404)
- binding magnesium ion: D470 (= D433), N497 (= N460)
- binding thiamine diphosphate: E59 (= E50), P85 (= P76), V417 (≠ M380), G418 (≠ T381), Q419 (= Q382), H420 (≠ F383), G443 (= G406), M445 (≠ L408), A471 (≠ Y434), S472 (≠ G435), N497 (= N460), E499 (≠ K462), Q500 (≠ L463), G501 (= G464), M502 (≠ E465), V503 (≠ I466)
P07342 Acetolactate synthase catalytic subunit, mitochondrial; Acetohydroxy-acid synthase catalytic subunit; AHAS; ALS; EC 2.2.1.6 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
27% identity, 98% coverage: 7:525/531 of query aligns to 94:643/687 of P07342
- R241 (= R153) binding FAD
- 355:376 (vs. 261:273, 32% identical) binding FAD
- 407:426 (vs. 294:313, 15% identical) binding FAD
6bd3A Saccharomyces cerevisiae acetohydroxyacid synthase
27% identity, 98% coverage: 7:525/531 of query aligns to 12:533/538 of 6bd3A
- active site: Y31 (≠ I25), G33 (= G27), G34 (≠ V28), A35 (≠ H29), I36 (≠ N30), E57 (= E50), T80 (≠ I73), F119 (≠ H113), Q120 (= Q114), E121 (≠ M115), K169 (≠ I163), R225 (≠ D221), M261 (vs. gap), V288 (≠ P282), V404 (≠ M380), L429 (≠ F405), G430 (= G406), M432 (≠ L408), D457 (= D433), N484 (= N460), L498 (= L490), G503 (= G495), L504 (≠ A496)
- binding flavin-adenine dinucleotide: R159 (= R153), G214 (= G209), A215 (≠ G210), G216 (= G211), N219 (≠ A214), T241 (≠ P245), L242 (= L246), Q243 (≠ Y247), L259 (vs. gap), G260 (vs. gap), H262 (vs. gap), G281 (= G271), A282 (≠ T272), R283 (≠ T273), D285 (≠ S275), R287 (= R281), V288 (≠ P282), E314 (≠ D294), V315 (≠ I295), D333 (= D313), A334 (= A314)
- binding 2-acetyl-thiamine diphosphate: P32 (= P26), E57 (= E50), P83 (= P76)
- binding magnesium ion: D457 (= D433), N484 (= N460)
- binding oxygen molecule: A35 (≠ H29), T80 (≠ I73), S81 (≠ T74), Q120 (= Q114)
- binding thiamine diphosphate: V404 (≠ M380), G405 (≠ T381), Q406 (= Q382), H407 (≠ F383), G430 (= G406), M432 (≠ L408), D457 (= D433), A458 (≠ Y434), S459 (≠ G435), M462 (≠ Y438), N484 (= N460)
Sites not aligning to the query:
1t9bA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorsulfuron (see paper)
28% identity, 98% coverage: 7:525/531 of query aligns to 10:539/583 of 1t9bA
- active site: Y29 (≠ I25), G31 (= G27), G32 (≠ V28), A33 (≠ H29), I34 (≠ N30), E55 (= E50), T78 (≠ I73), F117 (≠ H113), Q118 (= Q114), E119 (≠ M115), K167 (≠ I163), R214 (≠ D221), M250 (≠ L252), V277 (≠ P282), V393 (≠ M380), L418 (≠ F405), G419 (= G406), M421 (≠ L408), D446 (= D433), N473 (= N460), E475 (≠ K462), Q476 (≠ L463), M478 (≠ E465), V479 (≠ I466), W482 (vs. gap), L504 (= L490), G509 (= G495), L510 (≠ A496)
- binding 1-(2-chlorophenylsulfonyl)-3-(4-methoxy-6-methyl-l,3,5-triazin-2-yl)urea: V107 (≠ L102), P108 (≠ E104), F117 (≠ H113), D275 (≠ E276), R276 (= R281), M478 (≠ E465), W482 (vs. gap)
- binding flavin-adenine dinucleotide: R157 (= R153), G203 (= G209), A204 (≠ G210), G205 (= G211), N208 (≠ A214), T230 (= T233), L231 (≠ Y234), Q232 (≠ A235), M247 (≠ S250), L248 (≠ Y251), M250 (≠ L252), H251 (≠ A253), G270 (= G271), A271 (≠ T272), R272 (≠ T273), D274 (≠ S275), R276 (= R281), V277 (≠ P282), E303 (≠ D294), V304 (≠ I295), N308 (≠ V299), D322 (= D313), A323 (= A314), Q397 (≠ A384), M398 (≠ Y385), G416 (≠ Y403), G417 (= G404)
- binding magnesium ion: D446 (= D433), N473 (= N460), E475 (≠ K462)
Sites not aligning to the query:
1t9dB Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, metsulfuron methyl (see paper)
28% identity, 98% coverage: 7:525/531 of query aligns to 9:538/582 of 1t9dB
- active site: Y28 (≠ I25), G30 (= G27), G31 (≠ V28), A32 (≠ H29), I33 (≠ N30), E54 (= E50), T77 (≠ I73), F116 (≠ H113), Q117 (= Q114), E118 (≠ M115), K166 (≠ I163), R213 (≠ D221), M249 (≠ L252), V276 (≠ P282), V392 (≠ M380), L417 (≠ F405), G418 (= G406), M420 (≠ L408), D445 (= D433), N472 (= N460), E474 (≠ K462), Q475 (≠ L463), M477 (≠ E465), V478 (≠ I466), W481 (vs. gap), L503 (= L490), G508 (= G495), L509 (≠ A496)
- binding methyl 2-[({[(4-methoxy-6-methyl-1,3,5-triazin-2-yl)amino]carbonyl}amino)sulfonyl]benzoate: G31 (≠ V28), A32 (≠ H29), V106 (≠ L102), P107 (≠ E104), F116 (≠ H113), K166 (≠ I163), M249 (≠ L252), D274 (≠ E276), R275 (= R281), W481 (vs. gap)
- binding flavin-adenine dinucleotide: R156 (= R153), G202 (= G209), A203 (≠ G210), G204 (= G211), N207 (≠ A214), T229 (= T233), L230 (≠ Y234), Q231 (≠ A235), L247 (≠ Y251), M249 (≠ L252), H250 (≠ A253), G269 (= G271), A270 (≠ T272), R271 (≠ T273), D273 (≠ S275), R275 (= R281), V276 (≠ P282), E302 (≠ D294), V303 (≠ I295), N307 (≠ V299), G320 (≠ A312), D321 (= D313), A322 (= A314), Q396 (≠ A384), M397 (≠ Y385), G415 (≠ Y403), G416 (= G404)
- binding magnesium ion: D445 (= D433), N472 (= N460), E474 (≠ K462)
- binding 2,5-dimethyl-pyrimidin-4-ylamine: E54 (= E50), P80 (= P76), G418 (= G406), M420 (≠ L408), M450 (≠ Y438)
Sites not aligning to the query:
7egvA Acetolactate synthase from trichoderma harzianum with inhibitor harzianic acid (see paper)
27% identity, 98% coverage: 7:525/531 of query aligns to 10:546/590 of 7egvA
- active site: Y28 (≠ I25), G30 (= G27), G31 (≠ V28), A32 (≠ H29), I33 (≠ N30), E54 (= E50), T77 (≠ I73), F116 (≠ H113), Q117 (= Q114), K166 (≠ I163), E220 (≠ D221), M256 (≠ Y251), V283 (vs. gap), V400 (≠ M380), L425 (≠ F405), G426 (= G406), M428 (≠ L408), Q483 (≠ L463), M485 (≠ E465), V486 (≠ I466), W489 (vs. gap), L511 (= L490), G516 (= G495), I517 (≠ A496)
- binding flavin-adenine dinucleotide: R156 (= R153), G209 (= G210), Q210 (≠ G211), G211 (≠ S212), T236 (≠ A235), L237 (≠ A236), H238 (≠ R237), G276 (= G271), S277 (≠ T272), R278 (≠ T273), D280 (≠ S275), R282 (vs. gap), V283 (vs. gap), E309 (≠ D294), I310 (= I295), D328 (= D313), V329 (≠ A314), M405 (≠ I390), G423 (vs. gap), G424 (= G404)
- binding (2S)-3-methyl-2-[[(2S,4R)-1-methyl-4-[(2E,4E)-octa-2,4-dienoyl]-3,5-bis(oxidanylidene)pyrrolidin-2-yl]methyl]-2-oxidanyl-butanoic acid: F493 (vs. gap), Y494 (vs. gap)
- binding magnesium ion: D453 (= D433), N480 (= N460), E482 (≠ K462)
- binding 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-2-oxo-2,3-dihydro-1,3-thiazol-5-yl}ethyl trihydrogendiphosphate: P29 (= P26), E54 (= E50), Q117 (= Q114), V400 (≠ M380), G401 (≠ T381), Q402 (= Q382), H403 (≠ K388), G426 (= G406), M428 (≠ L408), D453 (= D433), A454 (≠ Y434), S455 (≠ G435), E482 (≠ K462), Q483 (≠ L463), G484 (= G464), M485 (≠ E465), V486 (≠ I466)
3ea4A Arabidopsis thaliana acetohydroxyacid synthase in complex with monosulfuron-ester (see paper)
26% identity, 99% coverage: 2:525/531 of query aligns to 7:553/582 of 3ea4A
- active site: Y32 (≠ I25), G34 (= G27), G35 (≠ V28), A36 (≠ H29), S37 (≠ N30), E58 (= E50), T81 (≠ I73), F120 (≠ M115), Q121 (≠ R116), E122 (≠ D117), K170 (≠ I163), M265 (vs. gap), V292 (= V277), V399 (≠ M380), G425 (= G406), M427 (≠ L408), D452 (= D433), N479 (= N460), H481 (≠ K462), L482 (= L463), M484 (≠ E465), V485 (≠ I466), W488 (vs. gap)
- binding methyl 2-{[(4-methylpyrimidin-2-yl)carbamoyl]sulfamoyl}benzoate: D290 (≠ E276), R291 (vs. gap), W488 (vs. gap)
- binding flavin-adenine dinucleotide-n5-isobutyl ketone: R160 (= R153), G221 (= G209), G222 (= G210), G223 (= G211), T245 (= T233), L246 (≠ Y234), M247 (≠ A235), L263 (vs. gap), G264 (vs. gap), M265 (vs. gap), H266 (vs. gap), G285 (= G271), R287 (≠ T273), D289 (≠ S275), R291 (vs. gap), D309 (= D294), I310 (= I295), G327 (≠ A312), D328 (= D313), V329 (≠ A314), M404 (≠ Y385), G422 (≠ Y403)
- binding magnesium ion: D452 (= D433), N479 (= N460), H481 (≠ K462)
- binding 2-[(2e)-3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-(1-hydroxyethylidene)-4-methyl-2,3-dihydro-1,3-thiazol-5-yl]ethyltrihydrogen diphosphate: V399 (≠ M380), G400 (≠ T381), Q401 (= Q382), H402 (≠ F383), M427 (≠ L408), G451 (= G432), D452 (= D433), G453 (≠ Y434), S454 (≠ G435), N479 (= N460), H481 (≠ K462), L482 (= L463), G483 (= G464), M484 (≠ E465), V485 (≠ I466)
Sites not aligning to the query:
3e9yA Arabidopsis thaliana acetohydroxyacid synthase in complex with monosulfuron (see paper)
26% identity, 99% coverage: 2:525/531 of query aligns to 7:553/582 of 3e9yA
- active site: Y32 (≠ I25), G34 (= G27), G35 (≠ V28), A36 (≠ H29), S37 (≠ N30), E58 (= E50), T81 (≠ I73), F120 (≠ M115), Q121 (≠ R116), E122 (≠ D117), K170 (≠ I163), M265 (vs. gap), V292 (= V277), V399 (≠ M380), G425 (= G406), M427 (≠ L408), D452 (= D433), N479 (= N460), H481 (≠ K462), L482 (= L463), M484 (≠ E465), V485 (≠ I466), W488 (vs. gap)
- binding N-[(4-methylpyrimidin-2-yl)carbamoyl]-2-nitrobenzenesulfonamide: D290 (≠ E276), R291 (vs. gap), W488 (vs. gap)
- binding flavin-adenine dinucleotide-n5-isobutyl ketone: R160 (= R153), G221 (= G209), G222 (= G210), G223 (= G211), T245 (= T233), L246 (≠ Y234), M247 (≠ A235), L263 (vs. gap), G285 (= G271), R287 (≠ T273), D289 (≠ S275), R291 (vs. gap), D309 (= D294), I310 (= I295), G327 (≠ A312), D328 (= D313), V329 (≠ A314), M404 (≠ Y385), G422 (≠ Y403)
- binding magnesium ion: D452 (= D433), N479 (= N460), H481 (≠ K462)
- binding 2-[(2e)-3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-(1-hydroxyethylidene)-4-methyl-2,3-dihydro-1,3-thiazol-5-yl]ethyltrihydrogen diphosphate: V399 (≠ M380), G400 (≠ T381), Q401 (= Q382), H402 (≠ F383), M427 (≠ L408), G451 (= G432), G453 (≠ Y434), S454 (≠ G435), N479 (= N460), H481 (≠ K462), L482 (= L463), G483 (= G464), M484 (≠ E465), V485 (≠ I466)
Sites not aligning to the query:
Query Sequence
>WP_085641493.1 NCBI__GCF_002115805.1:WP_085641493.1
MPKQPLGAQISQMLKERGVDTIFGIPGVHNVELYRGIEQAGITHVLARHEQGAGFMADGY
ARATGKPGVAYVITGPGLTNILTPLGQAYSDSVPVLAISSCLDEVAARRGQLHQMRDQRM
AAETVCAWSEEARSASAAYALIDRAFDQFASARARPCHMQVSIETLGALADPAPQPPAAR
PGLPSASHSDVYDVVAAVLAAKKPLFVFGGGSVAAADAIPDLLRQTGAASIVTYAARGVV
PADEPLYFGSYLARPDSAEITAQADLVIAVGTTLSEVDLWRPTLGHTAPMIRVDIDPEVF
TGMGPEDRAILADAGAFLKAMTIAIPARTDTKPPKWDAASVARKRAAWRAEVDAERPGIV
PVCDALRAVLPDDTMIYSDMTQFAYAAKEIWDMPRPGHWHHPYGFGTLGYALPAAIGGAV
ARPGLPTLAIAGDYGLQYTIQELGTAVELGLPLPILVWDNGKLGEIEDSMVRSQIAPNAV
VARNPDFLALAKAYGAEAVQPDSLEALQQAMLAAFKADGPTVIRVTPAIAG
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory