SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_085770149.1 NCBI__GCF_002117405.1:WP_085770149.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

4z9nB Abc transporter / periplasmic binding protein from brucella ovis with glutathione bound
33% identity, 94% coverage: 21:335/335 of query aligns to 4:324/324 of 4z9nB

query
sites
4z9nB
H
 
H
A
 
A
Q
 
D
T
 
T
L
 
L
E
 
S
S
 
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I
 
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A
 
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K
 
G
H
 
F
M
 
L
E
 
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C
 
C
G
 
G
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V
V
x
N
T
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T
G
 
G
V
 
L
D
 
L
D
 
G
W
 
F
N
 
A
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P
D
 
N
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D
H
 
K
G
 
G
N
 
E
L
 
W
S
 
S
A
 
G
L
 
F
E
 
D
A
 
V
E
 
D
V
 
Y
C
 
C
R
 
R
A
 
A
V
 
V
A
 
A
V
 
S
A
 
A
L
 
I
L
 
F
G
 
G
D
 
D
A
 
P
S
 
T
A
 
K
V
 
V
T
 
K
I
 
F
Q
 
T
N
 
P
F
 
L
P
x
N
A
|
A
E
 
K
L
 
-
E
 
E
A
x
R
L
 
F
N
 
T
A
 
A
L
 
L
K
 
Q
A
 
S
G
 
G
K
 
E
I
 
V
Q
 
D
L
 
V
A
 
L
I
 
I
-
x
R
G
x
N
V
x
T
T
|
T
P
 
W
S
 
T
A
 
I
S
 
S
T
x
R
A
 
D
A
 
T
R
 
S
F
 
L
G
 
G
V
 
L
G
 
D
F
 
F
G
 
A
P
 
G
P
 
I
V
 
N
F
 
Y
Y
 
Y
D
 
D
S
 
G
Q
 
Q
R
 
G
L
 
F
M
 
M
V
 
I
-
 
N
-
 
S
A
 
K
K
 
K
G
 
L
S
 
A
G
 
G
V
 
I
T
 
N
D
 
S
I
 
A
A
 
L
G
 
Q
L
 
L
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D
 
G
K
 
A
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C
A
 
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L
x
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A
 
A
R
 
N
G
 
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M
P
 
E
Y
 
Y
G
 
N
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P
M
 
V
A
 
V
H
 
F
S
 
E
E
 
K
Q
x
I
G
 
E
E
 
E
M
 
A
D
 
N
A
 
A
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A
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Y
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G
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R
C
 
C
E
 
D
A
 
A
A
 
Y
T
 
T
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x
T
M
x
D
E
 
Q
S
 
S
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S
L
 
L
A
 
Y
Q
 
G
S
 
V
R
 
R
A
 
L
G
 
A
F
 
L
H
 
A
A
 
N
P
 
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D
S
 
D
N
 
H
F
 
V
S
 
-
F
 
I
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L
P
 
P
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I
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I
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K
N
 
E
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P
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F
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G
P
 
L
A
 
T
Y
 
V
R
 
R
Y
 
Q
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G
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D
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A
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R
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W
G
 
A
L
 
D
T
 
V
V
 
V
D
 
R
W
 
W
T
 
T
I
 
H
G
 
N
A
 
A
L
 
L
I
 
L
E
 
N
A
 
A
E
 
E
A
 
E
L
 
Y
G
 
G
I
 
I
T
 
T
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Q
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A
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N
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V
A
 
E
A
 
E
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M
K
 
K
R
 
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E
 
S
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D
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D
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I
E
 
K
Q
 
R
L
 
L
L
 
L
G
 
G
-
 
A
-
 
E
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A
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D
F
 
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K
T
 
I
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G
Q
 
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A
 
D
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L
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G
L
 
L
A
 
D
H
 
K
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D
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A
 
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G
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R

Query Sequence

>WP_085770149.1 NCBI__GCF_002117405.1:WP_085770149.1
MPRLLLSLLVTGLLASCGVAHAQTLESIRSAKHMECGVVTGVDDWNGEDLHGNLSALEAE
VCRAVAVALLGDASAVTIQNFPAELEALNALKAGKIQLAIGVTPSASTAARFGVGFGPPV
FYDSQRLMVAKGSGVTDIAGLRDKLVCALDMTPPERILREELTARGIPYGLMAHSEQGEM
DAAVAVSRCEAATAMESRLAQSRAGFHAPTSNFSFLPERFGINPVVPAYRYGDQIFGLTV
DWTIGALIEAEALGITRDNVAASKREDLRAEQLLGRDFATAQALGLAHDWAAKVIAATGN
YGEIFQRTVGGPYHLDRGLNALWTEGGLMHPPPMK

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory