Comparing WP_085770499.1 NCBI__GCF_002117405.1:WP_085770499.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
45% identity, 92% coverage: 4:247/266 of query aligns to 3:238/240 of 1ji0A
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
30% identity, 78% coverage: 23:230/266 of query aligns to 19:232/254 of 1g6hA
Sites not aligning to the query:
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
30% identity, 78% coverage: 23:230/266 of query aligns to 19:232/253 of 1g9xB
Sites not aligning to the query:
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
32% identity, 92% coverage: 7:251/266 of query aligns to 2:239/240 of 6mjpA
6z4wA Ftse structure from streptococcus pneumoniae in complex with adp (space group p 1) (see paper)
32% identity, 83% coverage: 6:227/266 of query aligns to 2:218/230 of 6z4wA
A0A0H2ZM82 Cell division ATP-binding protein FtsE from Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) (see paper)
32% identity, 83% coverage: 6:227/266 of query aligns to 2:218/230 of A0A0H2ZM82
6z67B Ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution (see paper)
32% identity, 83% coverage: 6:227/266 of query aligns to 2:218/229 of 6z67B
6mbnA Lptb e163q in complex with atp (see paper)
32% identity, 86% coverage: 24:251/266 of query aligns to 19:240/241 of 6mbnA
Sites not aligning to the query:
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
32% identity, 85% coverage: 24:249/266 of query aligns to 18:237/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
32% identity, 85% coverage: 24:249/266 of query aligns to 18:237/238 of 6s8gA
Sites not aligning to the query:
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
32% identity, 84% coverage: 24:247/266 of query aligns to 18:235/235 of 6mhzA
Sites not aligning to the query:
7arlD Lolcde in complex with lipoprotein and adp (see paper)
33% identity, 78% coverage: 7:213/266 of query aligns to 2:208/222 of 7arlD
P75957 Lipoprotein-releasing system ATP-binding protein LolD; EC 7.6.2.- from Escherichia coli (strain K12) (see paper)
33% identity, 79% coverage: 4:213/266 of query aligns to 2:211/233 of P75957
7mdyC Lolcde nucleotide-bound
33% identity, 78% coverage: 7:213/266 of query aligns to 2:208/226 of 7mdyC
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
32% identity, 84% coverage: 24:246/266 of query aligns to 18:234/234 of 6b89A
Sites not aligning to the query:
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
32% identity, 84% coverage: 24:246/266 of query aligns to 18:234/234 of 4p31A
Sites not aligning to the query:
7v8iD Lolcd(e171q)e with bound amppnp in nanodiscs (see paper)
32% identity, 79% coverage: 4:213/266 of query aligns to 1:210/229 of 7v8iD
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
32% identity, 83% coverage: 24:245/266 of query aligns to 18:233/233 of 6b8bA
Sites not aligning to the query:
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
27% identity, 92% coverage: 7:251/266 of query aligns to 1:231/240 of 4ymuJ
8i6rB Cryo-em structure of pseudomonas aeruginosa ftse(e163q)x/envc complex with atp in peptidisc (see paper)
29% identity, 83% coverage: 7:227/266 of query aligns to 1:216/222 of 8i6rB