Comparing WP_085770502.1 NCBI__GCF_002117405.1:WP_085770502.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
32% identity, 85% coverage: 33:282/293 of query aligns to 1:235/240 of 6mjpA
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
31% identity, 83% coverage: 39:282/293 of query aligns to 9:253/253 of 1g9xB
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
31% identity, 83% coverage: 39:282/293 of query aligns to 9:253/254 of 1g6hA
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
31% identity, 85% coverage: 33:282/293 of query aligns to 1:235/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
31% identity, 85% coverage: 33:282/293 of query aligns to 1:235/238 of 6s8gA
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
30% identity, 87% coverage: 20:273/293 of query aligns to 3:238/378 of P69874
Sites not aligning to the query:
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
31% identity, 85% coverage: 33:282/293 of query aligns to 1:235/235 of 6mhzA
6mbnA Lptb e163q in complex with atp (see paper)
30% identity, 85% coverage: 33:282/293 of query aligns to 2:236/241 of 6mbnA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
30% identity, 85% coverage: 33:281/293 of query aligns to 1:234/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
30% identity, 85% coverage: 33:281/293 of query aligns to 1:234/234 of 4p31A
8y5iA Cryo-em structure of e.Coli spermidine transporter potd-potabc in translocation intermidiate state (see paper)
30% identity, 82% coverage: 35:273/293 of query aligns to 3:223/358 of 8y5iA
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
30% identity, 85% coverage: 33:280/293 of query aligns to 1:233/233 of 6b8bA
4yerA Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
30% identity, 81% coverage: 35:270/293 of query aligns to 5:223/285 of 4yerA
2d62A Crystal structure of multiple sugar binding transport atp-binding protein
30% identity, 82% coverage: 31:270/293 of query aligns to 3:230/375 of 2d62A
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
29% identity, 86% coverage: 34:284/293 of query aligns to 6:240/240 of 1ji0A
1oxvD Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
30% identity, 83% coverage: 35:277/293 of query aligns to 4:235/353 of 1oxvD
1oxvA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
30% identity, 83% coverage: 35:277/293 of query aligns to 4:235/353 of 1oxvA
1oxuA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
30% identity, 83% coverage: 35:277/293 of query aligns to 4:235/353 of 1oxuA