Comparing WP_085770595.1 NCBI__GCF_002117405.1:WP_085770595.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4xg1B Psychromonas ingrahamii diaminopimelate decarboxylase with llp
48% identity, 97% coverage: 2:411/424 of query aligns to 2:409/418 of 4xg1B
B4XMC6 Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori (Campylobacter pylori) (see paper)
46% identity, 91% coverage: 27:411/424 of query aligns to 13:394/405 of B4XMC6
4xg1A Psychromonas ingrahamii diaminopimelate decarboxylase with llp
45% identity, 96% coverage: 3:411/424 of query aligns to 2:384/393 of 4xg1A
3c5qA Crystal structure of diaminopimelate decarboxylase (i148l mutant) from helicobacter pylori complexed with l-lysine
45% identity, 91% coverage: 27:411/424 of query aligns to 11:386/394 of 3c5qA
Q58497 Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see paper)
39% identity, 97% coverage: 7:418/424 of query aligns to 14:434/438 of Q58497
1tufA Crystal structure of diaminopimelate decarboxylase from m. Jannaschi (see paper)
39% identity, 97% coverage: 7:418/424 of query aligns to 10:430/434 of 1tufA
1twiA Crystal structure of diaminopimelate decarboxylase from m. Jannaschii in co-complex with l-lysine (see paper)
39% identity, 97% coverage: 7:418/424 of query aligns to 10:430/434 of 1twiA
2yxxA Crystal structure analysis of diaminopimelate decarboxylate (lysa)
38% identity, 92% coverage: 18:407/424 of query aligns to 3:375/385 of 2yxxA
Q9X1K5 Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
38% identity, 92% coverage: 18:407/424 of query aligns to 4:376/386 of Q9X1K5
6n2aA Meso-diaminopimelate decarboxylase from arabidopsis thaliana (isoform 1)
35% identity, 95% coverage: 8:410/424 of query aligns to 10:414/422 of 6n2aA
P9WIU7 Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
35% identity, 96% coverage: 5:413/424 of query aligns to 16:443/447 of P9WIU7
1hkvA Mycobacterium diaminopimelate dicarboxylase (lysa) (see paper)
35% identity, 96% coverage: 5:413/424 of query aligns to 15:442/446 of 1hkvA
1knwA Crystal structure of diaminopimelate decarboxylase
33% identity, 92% coverage: 18:408/424 of query aligns to 19:410/421 of 1knwA
P00861 Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Escherichia coli (strain K12)
33% identity, 96% coverage: 2:408/424 of query aligns to 3:411/420 of P00861
1ko0A Crystal structure of a d,l-lysine complex of diaminopimelate decarboxylase
32% identity, 96% coverage: 2:408/424 of query aligns to 2:410/419 of 1ko0A
7ru7A Crystal structure of btrk, a decarboxylase involved in butirosin biosynthesis
29% identity, 95% coverage: 11:413/424 of query aligns to 1:408/412 of 7ru7A
5x7nA Crystal structure of meso-diaminopimelate decarboxylase (dapdc) from corynebacterium glutamicum (see paper)
32% identity, 96% coverage: 7:413/424 of query aligns to 21:440/442 of 5x7nA
5x7mA Crystal structure of meso-diaminopimelate decarboxylase (dapdc) from corynebacterium glutamicum (see paper)
32% identity, 96% coverage: 7:413/424 of query aligns to 21:440/443 of 5x7mA
8d5rA Structure of y430f d-ornithine/d-lysine decarboxylase complex with d- ornithine (see paper)
27% identity, 97% coverage: 4:415/424 of query aligns to 23:455/461 of 8d5rA
8d5dA Structure of y430f d-ornithine/d-lysine decarboxylase complex with d- arginine (see paper)
28% identity, 97% coverage: 4:415/424 of query aligns to 22:453/458 of 8d5dA
>WP_085770595.1 NCBI__GCF_002117405.1:WP_085770595.1
MHYFTYRDGVLHAEEVPLPALAERVGTPFYCYSSATIRRHFEVFAGAFGPEEALVCYAMK
ANSNQAVIALLAGLGAGADVVSGGELARALAAGVPPSRITFSGVGKTESEIDAALAAGIF
CFNVESEPELLAISAIAAARGRRAPISLRVNPDVDARTHAKISTGRAENKFGVPLARARE
VYAEAKSLPGLDVAGVDMHIGSQLTDLTPFDEAFSLLAEFTRVLKADGHAIRHVDLGGGL
GIPYREDDDPDSYHPERYAAIVRRHFAGSGLKLVLEPGRLIVGNAGALITRVIYVKRGEE
KTFVIVDAGMNDLVRPTLYDAHHEIVTVAENNGGPRVLADVVGPVCETGDYLALDRDMPP
VSSGDLLAVLSAGAYGAVQAGTYNSRPLIAETLVEGEKFAIIRPRETIEELIARDRLPGW
VERI
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Lawrence Berkeley National Laboratory