SitesBLAST
Comparing WP_085771336.1 NCBI__GCF_002117405.1:WP_085771336.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
6wprA Crystal structure of a putative 3-oxoacyl-acp reductase (fabg) with NADP(h) from acinetobacter baumannii (see paper)
42% identity, 97% coverage: 5:238/241 of query aligns to 9:240/244 of 6wprA
- active site: G16 (= G12), S138 (= S136), Y151 (= Y149)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G12 (= G8), S14 (= S10), R15 (= R11), T37 (≠ R33), L58 (≠ F55), D59 (= D56), V60 (≠ F57), N86 (= N83), A87 (= A84), G88 (≠ A85), I89 (≠ L86), I136 (= I134), Y151 (= Y149), K155 (= K153), P181 (= P179)
6t62A Crystal structure of acinetobacter baumannii fabg in complex with NADPH at 1.8 a resolution (see paper)
42% identity, 97% coverage: 5:238/241 of query aligns to 9:240/244 of 6t62A
- active site: G16 (= G12), S138 (= S136), Y151 (= Y149)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G12 (= G8), S14 (= S10), R15 (= R11), A36 (= A32), T37 (≠ R33), L58 (≠ F55), D59 (= D56), V60 (≠ F57), N86 (= N83), A87 (= A84), G88 (≠ A85), I89 (≠ L86), I136 (= I134), S137 (≠ A135), S138 (= S136), Y151 (= Y149), K155 (= K153), P181 (= P179), G182 (= G180), I184 (= I182), M188 (= M186)
9clyB Crystal structure of the 3-ketoacyl-(acyl-carrier-protein) reductase, cylg, from streptococcus agalactiae 2603v/r
36% identity, 99% coverage: 1:238/241 of query aligns to 3:238/242 of 9clyB
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G10 (= G8), R13 (= R11), G14 (= G12), I15 (= I13), Y34 (≠ A32), N35 (≠ R33), S36 (≠ R34), C56 (≠ F55), N57 (≠ D56), I58 (≠ F57), N84 (= N83), I135 (= I134), S137 (= S136), Y150 (= Y149), K154 (= K153), G181 (= G180), I183 (= I182), T185 (= T184), M187 (= M186)
6t65C Crsytal structure of acinetobacter baumannii fabg inhibitor complex at 2.35 a resolution (see paper)
40% identity, 97% coverage: 5:238/241 of query aligns to 7:215/218 of 6t65C
1q7bA The structure of betaketoacyl-[acp] reductase from e. Coli in complex with NADP+ (see paper)
38% identity, 97% coverage: 5:238/241 of query aligns to 8:239/243 of 1q7bA
- active site: G15 (= G12), E101 (≠ Q99), S137 (= S136), Q147 (≠ L146), Y150 (= Y149), K154 (= K153)
- binding calcium ion: E232 (≠ T231), T233 (= T232)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G11 (= G8), S13 (= S10), R14 (= R11), T36 (≠ R33), N58 (≠ D56), V59 (≠ F57), N85 (= N83), A86 (= A84), G87 (≠ A85), I88 (≠ L86), S137 (= S136), Y150 (= Y149), K154 (= K153), P180 (= P179), G181 (= G180), I183 (= I182)
P0AEK2 3-oxoacyl-[acyl-carrier-protein] reductase FabG; 3-ketoacyl-acyl carrier protein reductase; Beta-Ketoacyl-acyl carrier protein reductase; Beta-ketoacyl-ACP reductase; EC 1.1.1.100 from Escherichia coli (strain K12) (see 2 papers)
38% identity, 97% coverage: 5:238/241 of query aligns to 9:240/244 of P0AEK2
- GASR 12:15 (≠ GGSR 8:11) binding NADP(+)
- T37 (≠ R33) binding NADP(+)
- NV 59:60 (≠ DF 56:57) binding NADP(+)
- N86 (= N83) binding NADP(+)
- Y151 (= Y149) mutation to F: Defect in the affinity for NADPH.
- YAAAK 151:155 (≠ YGATK 149:153) binding NADP(+)
- A154 (≠ T152) mutation to T: Decreases in the thermolability of the reductase; when associated with K-233.
- K155 (= K153) mutation to A: Defect in the affinity for NADPH.
- I184 (= I182) binding NADP(+)
- E233 (≠ T231) mutation to K: Decreases in the thermolability of the reductase; when associated with T-154.
1q7cA The structure of betaketoacyl-[acp] reductase y151f mutant in complex with NADPH fragment (see paper)
38% identity, 97% coverage: 5:238/241 of query aligns to 8:239/243 of 1q7cA
- active site: G15 (= G12), S137 (= S136), Q147 (≠ L146), F150 (≠ Y149), K154 (= K153)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G11 (= G8), S13 (= S10), R14 (= R11), A35 (= A32), T36 (≠ R33), L57 (≠ F55), N58 (≠ D56), V59 (≠ F57), G87 (≠ A85), I88 (≠ L86)
P0A2C9 3-oxoacyl-[acyl-carrier-protein] reductase FabG; 3-ketoacyl-acyl carrier protein reductase; Beta-Ketoacyl-acyl carrier protein reductase; Beta-ketoacyl-ACP reductase; EC 1.1.1.100 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
38% identity, 97% coverage: 5:238/241 of query aligns to 9:240/244 of P0A2C9
- M125 (≠ I122) mutation to I: Loss of the temperature-sensitive phenotype; when associated with T-223.
- A223 (≠ F221) mutation to T: Loss of the temperature-sensitive phenotype; when associated with I-125.
- S224 (= S222) mutation to F: Distorts the local conformation and prevent stacking around Phe-221. The S224F mutation would additionally disrupt the hydrogen bond formed between Ser-224 and Glu-226.
7emgB Carbonyl reductase variant 4 (r123c/l209p/f183y/v61k) from serratia marcescens complexed with NADP+ (see paper)
37% identity, 98% coverage: 4:238/241 of query aligns to 7:239/243 of 7emgB
3osuA Crystal structure of the 3-oxoacyl-acyl carrier protein reductase, fabg, from staphylococcus aureus
37% identity, 98% coverage: 2:238/241 of query aligns to 5:243/246 of 3osuA
3op4A Crystal structure of putative 3-ketoacyl-(acyl-carrier-protein) reductase from vibrio cholerae o1 biovar eltor str. N16961 in complex with NADP+ (see paper)
37% identity, 97% coverage: 5:238/241 of query aligns to 12:243/247 of 3op4A
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G15 (= G8), S17 (= S10), R18 (= R11), I20 (= I13), T40 (≠ R33), N62 (≠ D56), V63 (≠ F57), N89 (= N83), A90 (= A84), I92 (≠ L86), V139 (≠ I134), S141 (= S136), Y154 (= Y149), K158 (= K153), P184 (= P179), G185 (= G180), I187 (= I182), T189 (= T184), M191 (= M186)
7caxD Crystal structure of bacterial reductase
36% identity, 98% coverage: 2:238/241 of query aligns to 2:236/238 of 7caxD
- active site: G12 (= G12), S139 (= S136), Y152 (= Y149)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G8 (= G8), S10 (= S10), R11 (= R11), I13 (= I13), H31 (≠ I31), R33 (= R33), S34 (≠ R34), R35 (vs. gap), D59 (= D56), V60 (≠ F57), N86 (= N83), A87 (= A84), G88 (≠ A85), S139 (= S136), Y152 (= Y149), K156 (= K153), P182 (= P179), G183 (= G180), I185 (= I182)
6t77A Crystal structure of klebsiella pneumoniae fabg(NADPH-dependent) NADP- complex at 1.75 a resolution (see paper)
38% identity, 97% coverage: 5:238/241 of query aligns to 9:240/244 of 6t77A
- active site: G16 (= G12), S138 (= S136), Y151 (= Y149)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G12 (= G8), S14 (= S10), R15 (= R11), T37 (≠ R33), L58 (≠ F55), N59 (≠ D56), V60 (≠ F57), A87 (= A84), G88 (≠ A85), I89 (≠ L86)
4ag3A Crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg) from pseudomonas aeruginosa in complex with NADPH at 1.8a resolution (see paper)
38% identity, 97% coverage: 5:238/241 of query aligns to 16:250/254 of 4ag3A
- active site: G23 (= G12), S148 (= S136), Y161 (= Y149), K165 (= K153)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G19 (= G8), S21 (= S10), R22 (= R11), G23 (= G12), I24 (= I13), T44 (≠ R33), L68 (≠ F55), D69 (= D56), V70 (≠ F57), N96 (= N83), A97 (= A84), I146 (= I134), S148 (= S136), Y161 (= Y149), K165 (= K153), P191 (= P179), G192 (= G180), F193 (= F181), I194 (= I182), T196 (= T184), M198 (= M186), T199 (= T187)
3sj7A Structure of beta-ketoacetyl-coa reductase (fabg) from staphylococcus aureus complex with NADPH (see paper)
37% identity, 98% coverage: 2:238/241 of query aligns to 2:236/239 of 3sj7A
- active site: G12 (= G12), S138 (= S136), Q148 (≠ L146), Y151 (= Y149), K155 (= K153)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G8 (= G8), S10 (= S10), R11 (= R11), I13 (= I13), N31 (vs. gap), Y32 (≠ I29), A33 (= A30), G34 (≠ I31), S35 (≠ A32), A58 (≠ F55), N59 (≠ D56), V60 (≠ F57), N86 (= N83), A87 (= A84), T109 (≠ V106), S138 (= S136), Y151 (= Y149), K155 (= K153), P181 (= P179), G182 (= G180)
4bnzA Crystal structure of 3-oxoacyl-(acyl-carrier-protein) reductase (fabg) from pseudomonas aeruginosa in complex with 1-methyl-n-phenylindole- 3-carboxamide at 2.5a resolution (see paper)
38% identity, 97% coverage: 5:238/241 of query aligns to 11:237/241 of 4bnzA
4jroC Crystal structure of 3-oxoacyl-[acyl-carrier protein]reductase (fabg) from listeria monocytogenes in complex with NADP+
36% identity, 97% coverage: 5:238/241 of query aligns to 9:244/247 of 4jroC
- active site: G16 (= G12), S142 (= S136), Q152 (≠ L146), Y155 (= Y149), K159 (= K153)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G12 (= G8), S14 (= S10), R15 (= R11), G16 (= G12), I17 (= I13), N35 (vs. gap), Y36 (= Y26), N37 (≠ R27), G38 (≠ V28), S39 (≠ I29), N63 (≠ S49), V64 (≠ L50), N90 (= N83), A91 (= A84), I93 (≠ L86), I113 (≠ V106), S142 (= S136), Y155 (= Y149), K159 (= K153), P185 (= P179), I188 (= I182), T190 (= T184)
4bnxA Crystal structure of 3-oxoacyl-(acyl-carrier-protein) reductase (fabg) from pseudomonas aeruginosa in complex with 6-(4-(2-chloroanilino)- 1h-quinazolin-2-ylidene)cyclohexa-2, 4-dien-1-one at 2.3a resolution (see paper)
37% identity, 97% coverage: 5:238/241 of query aligns to 11:236/239 of 4bnxA
- active site: G18 (= G12), S134 (= S136), Y147 (= Y149), K151 (= K153)
- binding 6-[4-(2-chloroanilino)-1H-quinazolin-2-ylidene]cyclohexa-2,4-dien-1-one: V103 (≠ T104), N104 (≠ R105), L107 (≠ M108), A149 (= A151), G153 (≠ A155), G156 (= G158), F157 (= F159)
4bnyA Crystal structure of 3-oxoacyl-(acyl-carrier-protein) reductase (fabg) from pseudomonas aeruginosa in complex with 4-(2-phenylthieno(3,2-d) pyrimidin-4-yl)morpholine at 1.8a resolution (see paper)
37% identity, 97% coverage: 5:238/241 of query aligns to 10:235/239 of 4bnyA
Q8N4T8 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-[acyl-carrier-protein] reductase beta subunit; KAR beta subunit; Carbonyl reductase family member 4; CBR4; Quinone reductase CBR4; Short chain dehydrogenase/reductase family 45C member 1; EC 1.1.1.100; EC 1.6.5.10 from Homo sapiens (Human) (see 4 papers)
38% identity, 97% coverage: 6:238/241 of query aligns to 7:232/237 of Q8N4T8
- G9 (= G8) mutation to S: Unable to restore growth of an OAR1-deficient yeast mutant.
- SRGI 11:14 (= SRGI 10:13) binding NADP(+)
- R12 (= R11) mutation to A: Strongly reduced ability to restore growth of an OAR1-deficient yeast mutant.
- R34 (= R33) mutation to A: Strongly reduced ability to restore growth of an OAR1-deficient yeast mutant. Strongly reduces NADPH-dependent reductase activity with acetoacetyl-CoA and 9,10-phenanthrene quinone. No effect on NADH-dependent reductase activities.
- R-N 34:35 (≠ RRE 33:35) binding NADP(+)
- D56 (= D56) binding NADP(+)
- L70 (= L70) to M: in dbSNP:rs2877380
- AAG 83:85 (≠ NAA 83:85) binding NADP(+)
- S135 (= S136) mutation to A: Unable to restore growth of an OAR1-deficient yeast mutant.
- Y148 (= Y149) binding NADP(+); mutation to A: Unable to restore growth of an OAR1-deficient yeast mutant.
- K152 (= K153) binding NADP(+); mutation to A: Unable to restore growth of an OAR1-deficient yeast mutant. Abolishes NADPH-dependent reductase activity with acetoacetyl-CoA. Strongly reduces NADPH-dependent reductase activity with 9,10-phenanthrene quinone. No effect on NADH-dependent reductase activities.
- R168 (= R169) mutation to E: Strongly reduced ability to restore growth of an OAR1-deficient yeast mutant. Increases NADPH-dependent reductase activity with acetoacetyl-CoA. Reduces NADPH-dependent reductase activity with 9,10-phenanthrene quinone. No effect on NADH-dependent reductase activities.
- K169 (≠ T170) mutation to E: Unable to restore growth of an OAR1-deficient yeast mutant. Increases NADPH-dependent reductase activity with acetoacetyl-CoA. Reduces NADPH-dependent reductase activity with 9,10-phenanthrene quinone. No effect on NADH-dependent reductase activities.
- VHT 181:183 (≠ IAT 182:184) binding NADP(+)
Query Sequence
>WP_085771336.1 NCBI__GCF_002117405.1:WP_085771336.1
MRNVIVSGGSRGIGLAIGRRLAQDGYRVIAIARRESEELRAEIQRLEGSLAFVPFDFNDV
HEVPALVIRLKKEFGPPYGLVNNAALGTEGALGVMHNAQIEELTRVNMLAPILLTKYVAR
NIMAAGVGGRIVNIASIIASTGYSGLSVYGATKAAMVGFTKSLAREVGRTGITVNAVAPG
FIATEMTSMLNADEKAKIARRAALNRLAEVDDVANAVGFLFSDKASNITGTTITVDAGAT
A
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory