Comparing WP_085773319.1 NCBI__GCF_002117405.1:WP_085773319.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4z9nB Abc transporter / periplasmic binding protein from brucella ovis with glutathione bound
49% identity, 93% coverage: 25:341/341 of query aligns to 4:324/324 of 4z9nB
4zv2A An ancestral arginine-binding protein bound to glutamine (see paper)
30% identity, 61% coverage: 35:243/341 of query aligns to 3:202/225 of 4zv2A
4zv1A An ancestral arginine-binding protein bound to arginine (see paper)
30% identity, 61% coverage: 35:243/341 of query aligns to 3:204/226 of 4zv1A
5t0wA Crystal structure of the ancestral amino acid-binding protein anccdt- 1, a precursor of cyclohexadienyl dehydratase
31% identity, 65% coverage: 27:247/341 of query aligns to 1:208/229 of 5t0wA
1xt8B Crystal structure of cysteine-binding protein from campylobacter jejuni at 2.0 a resolution (see paper)
26% identity, 64% coverage: 27:243/341 of query aligns to 5:213/251 of 1xt8B
2yjpA Crystal structure of the solute receptors for l-cysteine of neisseria gonorrhoeae (see paper)
27% identity, 65% coverage: 26:247/341 of query aligns to 1:211/247 of 2yjpA
5eyfB Crystal structure of solute-binding protein from enterococcus faecium with bound glutamate
28% identity, 67% coverage: 24:250/341 of query aligns to 1:217/243 of 5eyfB
6svfA Crystal structure of the p235gk mutant of argbp from t. Maritima (see paper)
28% identity, 64% coverage: 29:246/341 of query aligns to 3:209/229 of 6svfA
2v25A Structure of the campylobacter jejuni antigen peb1a, an aspartate and glutamate receptor with bound aspartate (see paper)
25% identity, 61% coverage: 29:236/341 of query aligns to 3:204/231 of 2v25A
6h20A Glnh bound to asn, mycobacterium tuberculosis (see paper)
35% identity, 41% coverage: 18:158/341 of query aligns to 34:172/287 of 6h20A
Sites not aligning to the query:
6h1uA Glnh bound to asp, mycobacterium tuberculosis (see paper)
35% identity, 41% coverage: 18:158/341 of query aligns to 34:172/287 of 6h1uA
Sites not aligning to the query:
6h2tA Glnh bound to glu, mycobacterium tuberculosis (see paper)
35% identity, 41% coverage: 18:158/341 of query aligns to 35:173/288 of 6h2tA
Sites not aligning to the query:
3k4uE Crystal structure of putative binding component of abc transporter from wolinella succinogenes dsm 1740 complexed with lysine
28% identity, 63% coverage: 35:250/341 of query aligns to 3:209/234 of 3k4uE
2vhaA Debp (see paper)
24% identity, 65% coverage: 22:243/341 of query aligns to 1:224/276 of 2vhaA
2ia4B Crystal structure of novel amino acid binding protein from shigella flexneri
24% identity, 65% coverage: 22:243/341 of query aligns to 2:225/278 of 2ia4B
4g4pA Crystal structure of glutamine-binding protein from enterococcus faecalis at 1.5 a (see paper)
29% identity, 61% coverage: 49:257/341 of query aligns to 27:224/235 of 4g4pA
Sites not aligning to the query:
8ovoA X-ray structure of the sf-iglusnfr-s72a in complex with l-aspartate
24% identity, 65% coverage: 24:243/341 of query aligns to 1:222/503 of 8ovoA
7a99B Crystal structure of the phe57trp mutant of the arginine-bound form of domain 1 from tmargbp (see paper)
32% identity, 35% coverage: 29:148/341 of query aligns to 2:121/130 of 7a99B
6detA The crystal structure of tv2483 bound to l-arginine (see paper)
23% identity, 60% coverage: 32:236/341 of query aligns to 9:204/243 of 6detA
2pvuA Crystal structures of the arginine-, lysine-, histidine-binding protein artj from the thermophilic bacterium geobacillus stearothermophilus (see paper)
28% identity, 48% coverage: 35:199/341 of query aligns to 4:159/235 of 2pvuA
>WP_085773319.1 NCBI__GCF_002117405.1:WP_085773319.1
MRLFAIGTSFLVLTALSFAFPAAARATTLKSVQDRGELVCGVSTGIPGFSIVDEKGSWSG
FDVDFCRAVAAAVLADPAKVRFVPLDADERFDALKTKKIDLLARNSTWTITSEADHDVAF
VGVNYYDGQGFLVPKRRKITSALELGGSKVCLKNGTESEANLADFFEANRMKFEAVRFET
LPEMLKAYETGGCDVVTSDVSQLYAGRLELSKKAEHAILADVISKEPLGPAVRQDDMQWF
EIVKWVNYAMLNAEELGISSANIADAKQSKKPSVRRFVGAEGDSAKELGLSPDWAVNVVK
AVGNYGESLDRNVGAKSPLGITRGLNHLWTMGGIQYAPPIR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory