Comparing WP_086508779.1 NCBI__GCF_002151265.1:WP_086508779.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
1nsjA Crystal structure of phosphoribosyl anthranilate isomerase from thermotoga maritima (see paper)
41% identity, 89% coverage: 11:204/217 of query aligns to 2:198/205 of 1nsjA
1lbmA Crystal structure of phosphoribosyl anthranilate isomerase (prai) in complex with reduced 1-(o-carboxyphenylamino)-1-deoxyribulose 5- phosphate (rcdrp) (see paper)
39% identity, 89% coverage: 11:204/217 of query aligns to 2:187/194 of 1lbmA
1piiA Three-dimensional structure of the bifunctional enzyme phosphoribosylanthranilate isomerase: indoleglycerolphosphate synthase from escherichia coli refined at 2.0 angstroms resolution (see paper)
32% identity, 88% coverage: 14:203/217 of query aligns to 258:444/452 of 1piiA
Sites not aligning to the query:
7etxA Crystal structure of bifunctional indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase (trpc) from corynebacterium glutamicum (see paper)
36% identity, 47% coverage: 107:209/217 of query aligns to 364:467/472 of 7etxA
Sites not aligning to the query:
7etyA Crystal structure of bifunctional indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase (trpc) from corynebacterium glutamicum in complex with reduced 1-(o-carboxyphenylamino)-1- deoxyribulose 5-phosphate (rcdrp) (see paper)
36% identity, 47% coverage: 107:209/217 of query aligns to 362:465/470 of 7etyA
Sites not aligning to the query:
>WP_086508779.1 NCBI__GCF_002151265.1:WP_086508779.1
MIDIQAVGCRTRIKFCGLSREQDVADAVAAGADALGFVLWPGSKRCVDEARLATLAAQVP
AFVTRVGLFVDQEPELIARSAEHLDLLQFHGDETPAFCAGFGRPWIKALRMRDDLDLHAA
AEAYAGAQALLLDAYRPGVPGGTGETFDWSRIPANLAKPVILAGGLGPDNVAQAIERVRP
FAVDVSGGVEAAPGRKDRGLLAAFAAAVAQADRTHRA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory