Comparing WP_086509070.1 NCBI__GCF_002151265.1:WP_086509070.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 3 hits to proteins with known functional sites (download)
Q6LX42 Sodium/alanine symporter AgcS; Alanine permease; Alanine/glycine:cation symporter from Methanococcus maripaludis (strain S2 / LL) (see paper)
37% identity, 90% coverage: 1:441/492 of query aligns to 6:444/453 of Q6LX42
6csfM Crystal structure of sodium/alanine symporter agcs with d-alanine bound (see paper)
38% identity, 88% coverage: 10:441/492 of query aligns to 1:424/431 of 6csfM
6cseM Crystal structure of sodium/alanine symporter agcs with l-alanine bound (see paper)
38% identity, 88% coverage: 10:441/492 of query aligns to 1:424/431 of 6cseM
>WP_086509070.1 NCBI__GCF_002151265.1:WP_086509070.1
MLDLINDLLWGKVLIALLIAVGVGFTLSSRFVQFRYFARMFRILGASQAFKRDKHGHLSS
FQALLLSIAGRVGGGNIAGVAVAITLGGPGAIFWMWLVGLMGMATSFLECTLAQAYKTAQ
PDGTYRGGPAYYIARGLGSRWKWLAALYSVLLLVTFGFGFTALQSYAVATSFDDAFGIPV
LYTGIGMAAVVGLIIFGGIKRIARVTEVLVPVMAVGYLLIAFVVLGMNLPRIPEVFLLIV
NSAFGLEPAVGGGIGAAIMMGVKRGLFSNEAGLGSAPNVAAVAYVPHPANQGVVQAFSVF
IDTLIICSATAFIILLSGAYDPASGADIGGVALTQVSLADHVGEWGRSFVSVALLLFGFS
TILYNYYLGENSLNYFSDGNVTLFNLFRIAIVALCAWGALTDLGTVFAFADVTMGFLALA
NLIALLMLFKPGLRLMRDFDEQIRAGIRHPVFDAQKFADLDIDPAAWEIEPEDIERLKRY
GAAAPTAGQPAK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory