Comparing WP_086510167.1 NCBI__GCF_002151265.1:WP_086510167.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
8y4wA Sialic acid bound form of tripartite atp-independent periplasmic (trap) transporter from fusobacterium nucleatum.
36% identity, 97% coverage: 10:421/423 of query aligns to 201:612/612 of 8y4wA
8b01B Cryo-em structure of the tripartite atp-independent periplasmic (trap) transporter siaqm from photobacterium profundum in a nanodisc (see paper)
38% identity, 96% coverage: 16:422/423 of query aligns to 15:421/427 of 8b01B
>WP_086510167.1 NCBI__GCF_002151265.1:WP_086510167.1
MALLLFLLLIVLFVIGVPIAFSLGLASAITVWQGELMPMLIVAQQYITSVNSFPLMAIPF
FILAGYLMQSGGISRRLVDFSNTIVGSMTGGLAMVAIVTSLFFAAISGSGAATTAAIGAI
LIPAMIAKGYASGYAAANQAASGALGVIIPPSIPLILYGIAANVSVGDMFVAGILPGLMI
TLSLLLFAYGYARYHGHGGGERSSWREMFTAGRKALLAILMPVIILGGIYGGIFTPTEAA
VIAVVYSFLVGFVIYREISLKDIVGILQEAAVTTAVVLSIIGAAGLYGRILQSLRVPSML
SNFVIGAIDSPLLFIVLVNVLLLMAGMFIEAAAAILIFVPILLPIAVSFGFDPVHFGIIM
VVNLAMGMFTPPVGLNLFVASQISKVGVARLTWSILPFVAIVLVNLFIISVVPFLSTWLP
SLR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory