Comparing WP_086510781.1 NCBI__GCF_002151265.1:WP_086510781.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 14 hits to proteins with known functional sites (download)
5dvjA Crystal structure of galactose complexed periplasmic glucose binding protein (ppgbp) from p. Putida csv86 (see paper)
60% identity, 92% coverage: 32:418/422 of query aligns to 5:391/396 of 5dvjA
5dviA High resolution crystal structure of glucose complexed periplasmic glucose binding protein (ppgbp) from p. Putida csv86 (see paper)
60% identity, 92% coverage: 32:418/422 of query aligns to 5:391/396 of 5dviA
4r2bA Crystal structure of sugar transporter oant_3817 from ochrobactrum anthropi, target efi-510528, with bound glucose
49% identity, 92% coverage: 32:421/422 of query aligns to 7:394/395 of 4r2bA
8hqqA Crystal structure of the glucose-binding protein sar11_0769 from "candidatus pelagibacter ubique" htcc1062 bound to glucose
48% identity, 89% coverage: 29:403/422 of query aligns to 2:380/398 of 8hqqA
2b3fA Thermus thermophilus glucose/galactose binding protein bound with galactose (see paper)
31% identity, 89% coverage: 31:404/422 of query aligns to 2:372/392 of 2b3fA
2b3bC Thermus thermophilus glucose/galactose binding protein with bound glucose (see paper)
31% identity, 89% coverage: 31:404/422 of query aligns to 2:372/392 of 2b3bC
2b3bA Thermus thermophilus glucose/galactose binding protein with bound glucose (see paper)
31% identity, 89% coverage: 31:404/422 of query aligns to 2:372/392 of 2b3bA
3vxcA Crystal structure of xylobiose-bxle complex from streptomyces thermoviolaceus opc-520
27% identity, 42% coverage: 95:272/422 of query aligns to 67:249/398 of 3vxcA
Sites not aligning to the query:
1eljA The crystal structure of liganded maltodextrin-binding protein from pyrococcus furiosus (see paper)
26% identity, 45% coverage: 98:285/422 of query aligns to 70:243/380 of 1eljA
Sites not aligning to the query:
4g68A Biochemical and structural insights into xylan utilization by the thermophilic bacteriumcaldanaerobius polysaccharolyticus (see paper)
27% identity, 28% coverage: 99:216/422 of query aligns to 70:186/392 of 4g68A
Sites not aligning to the query:
7c0kB Crystal structure of a dinucleotide-binding protein of abc transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (form ii) (see paper)
26% identity, 87% coverage: 33:398/422 of query aligns to 20:376/397 of 7c0kB
7c0oB Crystal structure of a dinucleotide-binding protein (y56f) of abc transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (see paper)
26% identity, 87% coverage: 33:398/422 of query aligns to 19:375/397 of 7c0oB
7c0kA Crystal structure of a dinucleotide-binding protein of abc transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (form ii) (see paper)
26% identity, 87% coverage: 33:398/422 of query aligns to 19:375/396 of 7c0kA
3oo6A Crystal structures and biochemical characterization of the bacterial solute receptor acbh reveal an unprecedented exclusive substrate preference for b-d-galactopyranose (see paper)
23% identity, 45% coverage: 80:270/422 of query aligns to 50:238/390 of 3oo6A
Sites not aligning to the query:
>WP_086510781.1 NCBI__GCF_002151265.1:WP_086510781.1
MTLLANPFRKTALALATAAAASLTFSIQAAEVEVLHWWTSGGEARAANVLKELMEAEGYG
WEDFAVAGGGGETAMTVLKSRAMSGNPPSAAQIKGPEIQEWGELGLLGELDEVAEAEGWD
ELLPPTVADVMRHNGSYVAVPVNVHRVNWLWANPQVLAAAGVEMPTTLDELFAAGEAIRE
AGYIPLAHGGQAWQDATVFESVLLASGGTEFYQQALVELDPEALGSERMIEALETFKRLR
ELMDADMSGRDWNIATSMVIEGSAGMQLMGDWAKGEFTAAGLTAGEEYLCAAAPGTQDAF
TFNIDSLAMFRVEGEEREAQQALARLVLEPTFQEAFNLAKGSIPARPDLDMSGFDVCAQQ
SMDDFQRTAEEGGLVPSMAHGMAVRADVQGAIFDVVTNYFNSRDMAAEEAARRMVNAAQA
AL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory