SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_086511264.1 NCBI__GCF_002151265.1:WP_086511264.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

P70994 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Bacillus subtilis (strain 168) (see paper)
38% identity, 91% coverage: 1:59/65 of query aligns to 1:60/62 of P70994

query
sites
P70994
M
 
M
P
|
P
I
 
Y
V
 
V
T
 
T
I
 
V
Q
 
K
Q
 
M
F
 
L
P
 
E
-
 
G
R
|
R
D
 
T
L
 
D
T
 
E
Q
 
Q
K
 
K
R
 
R
E
 
N
L
 
L
A
 
V
Q
 
E
R
 
K
I
 
V
T
 
T
Q
 
E
A
 
A
F
 
V
V
 
K
E
 
E
V
 
T
Y
 
T
G
 
G
T
 
A
P
 
S
E
 
E
E
 
E
S
 
K
V
 
I
Q
 
V
V
 
V
F
 
F
F
 
I
S
 
E
E
 
E
V
 
M
D
 
R
G
 
K
E
 
D
N
 
H
W
 
Y
A
 
A
K
 
V
A
 
A
G
 
G
K
 
K
M
 
R
G
 
L
C
 
S
D
 
D

2opaA Ywhb binary complex with 2-fluoro-p-hydroxycinnamate
37% identity, 89% coverage: 2:59/65 of query aligns to 1:59/61 of 2opaA

query
sites
2opaA
P
 
P
I
 
Y
V
 
V
T
 
T
I
 
V
Q
 
K
Q
x
M
F
 
L
P
 
E
-
 
G
R
|
R
D
 
T
L
 
D
T
 
E
Q
 
Q
K
 
K
R
 
R
E
 
N
L
 
L
A
 
V
Q
 
E
R
 
K
I
 
V
T
 
T
Q
 
E
A
 
A
F
 
V
V
 
K
E
 
E
V
 
T
Y
 
T
G
 
G
T
 
A
P
 
S
E
 
E
E
 
E
S
 
K
V
 
I
Q
x
V
V
 
V
F
 
F
F
 
I
S
 
E
E
 
E
V
 
M
D
 
R
G
 
K
E
 
D
N
 
H
W
x
Y
A
 
A
K
 
V
A
 
A
G
 
G
K
 
K
M
 
R
G
 
L
C
 
S
D
 
D

Sites not aligning to the query:

Query Sequence

>WP_086511264.1 NCBI__GCF_002151265.1:WP_086511264.1
MPIVTIQQFPRDLTQKRELAQRITQAFVEVYGTPEESVQVFFSEVDGENWAKAGKMGCDR
QQGQG

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory