Comparing WP_086511775.1 NCBI__GCF_002151265.1:WP_086511775.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
8y4wA Sialic acid bound form of tripartite atp-independent periplasmic (trap) transporter from fusobacterium nucleatum.
36% identity, 96% coverage: 15:419/424 of query aligns to 206:610/612 of 8y4wA
8b01B Cryo-em structure of the tripartite atp-independent periplasmic (trap) transporter siaqm from photobacterium profundum in a nanodisc (see paper)
36% identity, 97% coverage: 11:423/424 of query aligns to 11:422/427 of 8b01B
>WP_086511775.1 NCBI__GCF_002151265.1:WP_086511775.1
MNLVIGLSLIILFAFGVPIAVSIMLASIIGIEFFTRLPLLLVPQQMFIGIDKFPLMAIPF
FILAGNLMAAGGISQRLVDLAKSIVGGVQGGLAMTCVLTCMMFAAVSGSSVATTFAIGAI
LIPAMVRHGYPKPLAASIQASSAELGVLIPPSIPLILFGVSTDTSIGQLFLAGVGPGLLI
GTALILFLYLFCKVRGFGLEDHKDSTSFVISFKRAWAALLMPVVVIGGIYGGVFTPTEAS
AVAVFYALLVGGLYYRELKVADLWPILRQSVISTAAVMLIIAAASLFSFLISRTGLPGHI
AGWVTGVFDSPMTFLLAVNVLLLIVGMFIETSAAILVLAPILTPIAIQFGVHPVHFGLIM
VVNLALGMITPPLGVNLFAACAVAKISIDQMLPWLVRFVLVVLACLVAITYMPWISLGLV
RLVY
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory